SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00089
Pre Gene Modal
BGIBMGA002019
Annotation
PREDICTED:_deformed_epidermal_autoregulatory_factor_1_isoform_X1_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear   Reliability : 4.388
 

Sequence

CDS
ATGGCCGAGAATAGAAGTTCGGACAACGTCGTCATGCCGGACATTACCGAAGTATCCGAAGCCGATCCATTGTCGACGGCGACCGAGCACGACAACGAGCGGGTGGAGGGCACGTCTGTGTTGTCTACCACCATCAAAAACACCCGGCTGTCCAATGATTCTAACGGAGTTGTGACTGTACCAGTCTCGTTGCCAGTTGGGACGCTCATCGCGGGTACCACCTTCAACGTAATCACGTCAGACCATTTGCCGCATTTCAAGCCAATGATCTGCGTTGACAATGGTTTTATTTCGGGTGGGCCAGTGAGCGATGAGTTAAAAGCAACACACATCGTCATCCAGAACCCTCCTTCTCCTACTCGAACTAATTGCGAGGATGTGGTGGTAGCTGCGCCTGCGCCGCGATCGATGAGTGCACGATCATGGACGGAGACTGCGAACATGCCAGTGCTGCCGGTACGCTGTAAAAATACATCAGCAGAGCTCCACAAAAATAAATTCGGTTCAGGGGGCAGAGGCAGGTGTATCAAATACGGCATAGAGTGGTACACTCCTAGTGAGTTCGAAGCTCTATGTGGCAGAGCCTCTAGCAAAGATTGGAAGAGGTCTATAAGGTTTGGTGGAAGAAGTATTCAAGCTCTCATTGATGAGGGTATTTTGACTCCACATGCTACAAGCTGCACTTGCGGAGCTTGCTGTGATGATAAATCTGCCATGGGACCAGTGAGACTATTCACTCCATATAAAAGAAAGCGAAAGGAAGAAAGAAGTGAGAAGAAACCAAAAATTAAAAGAGAAAGCAGCATTGGAGAGAGTGAAGTGGATAACATACACCAGAGCAGTGAGAATAGTCACTCAAAAGAAGCTTGGCAGAGCATCGCTGAGGGTTTGGAAACTACTACCGATTACCAGATACTGGGGAACCCTGAAATCAAGACTGACCCCCCTCCAACAGATGTACCAGACATGAGCGCTGTTTTAAAACGTCTAGATGACATCAGTGAAACCCTAGTGAGGCTGTCCACGGAACTAAAGCAATGTGTAGAAGATGTTAGACGGGTCAGTGCTCGACAACTAGAGCGCTTGGAGCAAGAACGGACGTCAGCCCTACTCGCTGCCAGTGTCGATGATCAGGTTGATCCTGAGCAAGTATTATTGCATAATGTTGAAGATACAGAATCTAAGAAGTGCGCTAATTGCAACCGTGAAGCATCAGCAGAATGTTCTTTATGCAGGCGTACACCATATTGTTCCACATATTGTCAGAAGAAGGACTGGGCTTCACATCAGATTGAGTGCCTACGATCGGTGCCAGCAATACATACTGATGCACAACAGCACCAATCAATAATGCTGATTGTTGAAAGCCAGCACCAATAG
Protein
MAENRSSDNVVMPDITEVSEADPLSTATEHDNERVEGTSVLSTTIKNTRLSNDSNGVVTVPVSLPVGTLIAGTTFNVITSDHLPHFKPMICVDNGFISGGPVSDELKATHIVIQNPPSPTRTNCEDVVVAAPAPRSMSARSWTETANMPVLPVRCKNTSAELHKNKFGSGGRGRCIKYGIEWYTPSEFEALCGRASSKDWKRSIRFGGRSIQALIDEGILTPHATSCTCGACCDDKSAMGPVRLFTPYKRKRKEERSEKKPKIKRESSIGESEVDNIHQSSENSHSKEAWQSIAEGLETTTDYQILGNPEIKTDPPPTDVPDMSAVLKRLDDISETLVRLSTELKQCVEDVRRVSARQLERLEQERTSALLAASVDDQVDPEQVLLHNVEDTESKKCANCNREASAECSLCRRTPYCSTYCQKKDWASHQIECLRSVPAIHTDAQQHQSIMLIVESQHQ

Summary

EMBL
BABH01015789    BABH01015790    AGBW02009564    OWR50424.1    NWSH01002716    PCG67630.1    + More
KQ459463    KPJ00548.1    KQ461108    KPJ09081.1    KZ149952    PZC76569.1    KQ971321    EEZ99506.1    GEZM01038200    JAV81726.1    APGK01039325    KB740969    KB632230    ENN76751.1    ERL90391.1    BT126494    AEE61458.1    LJIG01000373    KRT86567.1    KQ981268    KYN43901.1    ADTU01002719    ADTU01002720    ADTU01002721    KQ982431    KYQ56435.1    KQ976492    KYM83300.1    GL437203    EFN70811.1    KQ978344    KYM94784.1    KZ288204    PBC33192.1    KQ414615    KOC68749.1    AJWK01022434    KQ434931    KZC11854.1    KK107462    QOIP01000013    EZA50315.1    RLU15194.1    KQ760382    OAD60707.1    KQ435714    KOX79202.1    GFDF01006220    JAV07864.1    AAZX01008588    GL452320    EFN77468.1    JRES01000836    KNC27863.1    GBHO01014631    GDHC01018559    JAG28973.1    JAQ00070.1    GEDC01018645    JAS18653.1    GECU01031141    JAS76565.1    ATLV01024156    KE525350    KFB50866.1    GDHF01019776    JAI32538.1    GDHF01023580    JAI28734.1    GAKP01002397    JAC56555.1    GAMC01001262    JAC05294.1    GBXI01010546    JAD03746.1    KA646291    AFP60920.1    RLU15193.1    CCAG010016073    JXJN01010895    LBMM01010817    KMQ87212.1    GANO01003075    JAB56796.1    GFXV01001281    MBW13086.1    DS235873    EEB19615.1    ABLF02029098    ABLF02029103    KQ981001    KYN10414.1    GGMS01012974    MBY82177.1    KK855086    PTY20737.1    ABLF02020605    ABLF02020607    GEBQ01018316    JAT21661.1    ABLF02016786   
Pfam
PF01753   zf-MYND        + More
PF01342   SAND
Interpro
IPR024119   TF_DEAF-1        + More
IPR000770   SAND_dom       
IPR002893   Znf_MYND       
IPR010919   SAND-like_dom_sf       
SUPFAM
SSF63763   SSF63763       
Gene 3D
PDB
1H5P     E-value=6.63595e-08,     Score=137

Ontologies

Topology

Length:
459
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
11.68215
Exp number, first 60 AAs:
2.42156
Total prob of N-in:
0.51188
outside
1  -  459
 
 

Population Genetic Test Statistics

Pi
21.257879
Theta
23.337689
Tajima's D
0.151904
CLR
0.007177
CSRT
0.415679216039198
Interpretation
Uncertain
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