Gene

KWMTBOMO00089

Pre Gene Modal

BGIBMGA002019

Annotation

PREDICTED:_deformed_epidermal_autoregulatory_factor_1_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr1(-):2555580-2565146      View in EpiBrowser

Transcription factor

SAND

Location in the cell

Nuclear   Reliability : 4.388

CDS

ATGGCCGAGAATAGAAGTTCGGACAACGTCGTCATGCCGGACATTACCGAAGTATCCGAAGCCGATCCATTGTCGACGGCGACCGAGCACGACAACGAGCGGGTGGAGGGCACGTCTGTGTTGTCTACCACCATCAAAAACACCCGGCTGTCCAATGATTCTAACGGAGTTGTGACTGTACCAGTCTCGTTGCCAGTTGGGACGCTCATCGCGGGTACCACCTTCAACGTAATCACGTCAGACCATTTGCCGCATTTCAAGCCAATGATCTGCGTTGACAATGGTTTTATTTCGGGTGGGCCAGTGAGCGATGAGTTAAAAGCAACACACATCGTCATCCAGAACCCTCCTTCTCCTACTCGAACTAATTGCGAGGATGTGGTGGTAGCTGCGCCTGCGCCGCGATCGATGAGTGCACGATCATGGACGGAGACTGCGAACATGCCAGTGCTGCCGGTACGCTGTAAAAATACATCAGCAGAGCTCCACAAAAATAAATTCGGTTCAGGGGGCAGAGGCAGGTGTATCAAATACGGCATAGAGTGGTACACTCCTAGTGAGTTCGAAGCTCTATGTGGCAGAGCCTCTAGCAAAGATTGGAAGAGGTCTATAAGGTTTGGTGGAAGAAGTATTCAAGCTCTCATTGATGAGGGTATTTTGACTCCACATGCTACAAGCTGCACTTGCGGAGCTTGCTGTGATGATAAATCTGCCATGGGACCAGTGAGACTATTCACTCCATATAAAAGAAAGCGAAAGGAAGAAAGAAGTGAGAAGAAACCAAAAATTAAAAGAGAAAGCAGCATTGGAGAGAGTGAAGTGGATAACATACACCAGAGCAGTGAGAATAGTCACTCAAAAGAAGCTTGGCAGAGCATCGCTGAGGGTTTGGAAACTACTACCGATTACCAGATACTGGGGAACCCTGAAATCAAGACTGACCCCCCTCCAACAGATGTACCAGACATGAGCGCTGTTTTAAAACGTCTAGATGACATCAGTGAAACCCTAGTGAGGCTGTCCACGGAACTAAAGCAATGTGTAGAAGATGTTAGACGGGTCAGTGCTCGACAACTAGAGCGCTTGGAGCAAGAACGGACGTCAGCCCTACTCGCTGCCAGTGTCGATGATCAGGTTGATCCTGAGCAAGTATTATTGCATAATGTTGAAGATACAGAATCTAAGAAGTGCGCTAATTGCAACCGTGAAGCATCAGCAGAATGTTCTTTATGCAGGCGTACACCATATTGTTCCACATATTGTCAGAAGAAGGACTGGGCTTCACATCAGATTGAGTGCCTACGATCGGTGCCAGCAATACATACTGATGCACAACAGCACCAATCAATAATGCTGATTGTTGAAAGCCAGCACCAATAG

Protein

MAENRSSDNVVMPDITEVSEADPLSTATEHDNERVEGTSVLSTTIKNTRLSNDSNGVVTVPVSLPVGTLIAGTTFNVITSDHLPHFKPMICVDNGFISGGPVSDELKATHIVIQNPPSPTRTNCEDVVVAAPAPRSMSARSWTETANMPVLPVRCKNTSAELHKNKFGSGGRGRCIKYGIEWYTPSEFEALCGRASSKDWKRSIRFGGRSIQALIDEGILTPHATSCTCGACCDDKSAMGPVRLFTPYKRKRKEERSEKKPKIKRESSIGESEVDNIHQSSENSHSKEAWQSIAEGLETTTDYQILGNPEIKTDPPPTDVPDMSAVLKRLDDISETLVRLSTELKQCVEDVRRVSARQLERLEQERTSALLAASVDDQVDPEQVLLHNVEDTESKKCANCNREASAECSLCRRTPYCSTYCQKKDWASHQIECLRSVPAIHTDAQQHQSIMLIVESQHQ

Uniprot

H9IXN6   A0A212F9L0   A0A2A4J853   A0A194Q4T4   A0A194QZR4   A0A2W1BND9   + More
D6WIQ4   A0A1W4WX63   A0A1Y1MCZ0   N6U7X6   J3JTD8   A0A0T6BI46   A0A195FTZ6   A0A158NNI0   A0A151X7S9   A0A151I3R2   E2A6U5   A0A195C1N3   A0A2A3EPJ8   A0A087ZS71   A0A0L7RD56   A0A1B0GJX6   A0A154PK68   A0A026W2K1   A0A310SG00   A0A0N0U6Y5   A0A1L8DNC5   K7J9U9   E2C3D0   A0A0L0C639   A0A0A9YCZ0   A0A1B6CZD8   A0A1B6HPP0   A0A084WKX2   A0A0K8V169   A0A0K8UPY3   A0A034WQT7   W8C687   A0A1I8PNQ0   A0A0A1WYM9   A0A1I8MC44   T1PBZ6   A0A3L8D5A3   A0A1B0FC71   A0A1A9UXW6   A0A1A9YN18   A0A1B0BAB9   A0A1A9Z3K4   A0A1A9WS91   A0A0J7KA85   U5EQX5   A0A2H8TG45   E0W221   J9L485   A0A151ITJ7   A0A2S2QWN6   A0A2R7WM81   J9JZJ0   A0A1B6LDB1   J9KVF6  

Pubmed

19121390    22118469    26354079    28756777    18362917    19820115    + More
28004739    23537049    22516182    21347285    20798317    24508170    30249741    20075255    26108605    25401762    26823975    24438588    25348373    24495485    25830018    25315136    20566863   

EMBL

BABH01015789    BABH01015790    AGBW02009564    OWR50424.1    NWSH01002716    PCG67630.1    + More
KQ459463    KPJ00548.1    KQ461108    KPJ09081.1    KZ149952    PZC76569.1    KQ971321    EEZ99506.1    GEZM01038200    JAV81726.1    APGK01039325    KB740969    KB632230    ENN76751.1    ERL90391.1    BT126494    AEE61458.1    LJIG01000373    KRT86567.1    KQ981268    KYN43901.1    ADTU01002719    ADTU01002720    ADTU01002721    KQ982431    KYQ56435.1    KQ976492    KYM83300.1    GL437203    EFN70811.1    KQ978344    KYM94784.1    KZ288204    PBC33192.1    KQ414615    KOC68749.1    AJWK01022434    KQ434931    KZC11854.1    KK107462    QOIP01000013    EZA50315.1    RLU15194.1    KQ760382    OAD60707.1    KQ435714    KOX79202.1    GFDF01006220    JAV07864.1    AAZX01008588    GL452320    EFN77468.1    JRES01000836    KNC27863.1    GBHO01014631    GDHC01018559    JAG28973.1    JAQ00070.1    GEDC01018645    JAS18653.1    GECU01031141    JAS76565.1    ATLV01024156    KE525350    KFB50866.1    GDHF01019776    JAI32538.1    GDHF01023580    JAI28734.1    GAKP01002397    JAC56555.1    GAMC01001262    JAC05294.1    GBXI01010546    JAD03746.1    KA646291    AFP60920.1    RLU15193.1    CCAG010016073    JXJN01010895    LBMM01010817    KMQ87212.1    GANO01003075    JAB56796.1    GFXV01001281    MBW13086.1    DS235873    EEB19615.1    ABLF02029098    ABLF02029103    KQ981001    KYN10414.1    GGMS01012974    MBY82177.1    KK855086    PTY20737.1    ABLF02020605    ABLF02020607    GEBQ01018316    JAT21661.1    ABLF02016786   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053268    UP000053240    UP000007266    + More
UP000192223    UP000019118    UP000030742    UP000078541    UP000005205    UP000075809    UP000078540    UP000000311    UP000078542    UP000242457    UP000005203    UP000053825    UP000092461    UP000076502    UP000053097    UP000279307    UP000053105    UP000002358    UP000008237    UP000037069    UP000030765    UP000095300    UP000095301    UP000092444    UP000078200    UP000092443    UP000092460    UP000092445    UP000091820    UP000036403    UP000009046    UP000007819    UP000078492   

PRIDE

H9IXN6   

Pfam

PF01753   zf-MYND        + More
PF01342   SAND

Interpro

IPR024119   TF_DEAF-1        + More
IPR000770   SAND_dom       
IPR002893   Znf_MYND       
IPR010919   SAND-like_dom_sf       

SUPFAM

SSF63763   SSF63763       

Gene 3D

3.10.390.10    

ProteinModelPortal

H9IXN6   A0A212F9L0   A0A2A4J853   A0A194Q4T4   A0A194QZR4   A0A2W1BND9   + More
D6WIQ4   A0A1W4WX63   A0A1Y1MCZ0   N6U7X6   J3JTD8   A0A0T6BI46   A0A195FTZ6   A0A158NNI0   A0A151X7S9   A0A151I3R2   E2A6U5   A0A195C1N3   A0A2A3EPJ8   A0A087ZS71   A0A0L7RD56   A0A1B0GJX6   A0A154PK68   A0A026W2K1   A0A310SG00   A0A0N0U6Y5   A0A1L8DNC5   K7J9U9   E2C3D0   A0A0L0C639   A0A0A9YCZ0   A0A1B6CZD8   A0A1B6HPP0   A0A084WKX2   A0A0K8V169   A0A0K8UPY3   A0A034WQT7   W8C687   A0A1I8PNQ0   A0A0A1WYM9   A0A1I8MC44   T1PBZ6   A0A3L8D5A3   A0A1B0FC71   A0A1A9UXW6   A0A1A9YN18   A0A1B0BAB9   A0A1A9Z3K4   A0A1A9WS91   A0A0J7KA85   U5EQX5   A0A2H8TG45   E0W221   J9L485   A0A151ITJ7   A0A2S2QWN6   A0A2R7WM81   J9JZJ0   A0A1B6LDB1   J9KVF6  

PDB

1H5P     E-value=6.63595e-08,     Score=137

KEGG

101742707    K23041 deformed epidermal autoregulatory factor 1 | (RefSeq) deformed epidermal autoregulatory facto

GO

GO:0003677   GO:0046872   GO:0003700   GO:0006357   GO:0005634   GO:0016021   GO:0005515   GO:0007017   GO:0005200   GO:0005525   GO:0048013   GO:0005003   GO:0005887   GO:0007169  

PANTHER

PTHR10237  

Length:

459

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

11.68215

Exp number, first 60 AAs:

2.42156

Total prob of N-in:

0.51188

outside

1  -  459

 

 

Pi

21.257879

Theta

23.337689

Tajima's D

0.151904

CLR

0.007177

CSRT

0.415679216039198

Interpretation

Uncertain