Gene

KWMTBOMO00051

Pre Gene Modal

BGIBMGA002091

Annotation

putative_CTCF-like_protein_[Danaus_plexippus]

Location

Bomo_Chr1(+):1448811-1469527      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.838

CDS

ATGGATGAAGAAACTACAACAGTTATCACTATGGAAAGTGAAGACGAACCTGACACAGGGGTGACATACTTCGTAGACGAAGAAGGCAGGTACTATTACCAGCCCACTGGGAATAATCAGGACCTGGTTCCGCTGCAGACTGAAGCAACGGAAACCACAAATAAAGACTCTATTAGCGATGCTGCTGAAGATGTGCTGATGAGCAACGAATCCGAACAATACCAGACCGTGACTCTTGTTCCGTCAGAGAACAGCGGCGGTGAAGTCAGCTACGTCCTCGTGGTGCAAGAAGAGACTAAACCTATCAACCTTGATATTAAAGTCGATCAGGATGAAGAAAAGGTCTCCGAAGACGTGTATAACTTTGAAGAGGAGGAGATTGAGGCAGACGTTACCGACGAAGAAGACGAAAGCGAAGCAAAGAAAGCTCAACCGCAGACGAAGAAGGGAAAGTTCTTACGTCCATGTTTCACGTGCAATTTTTGTTCGTATTCAAGCCACAGGCGATATCTGCTTCTTCGCCACATGAAATCTCACTCTGAAGATCGTCCCCATAAGTGTGGTGTGTGCGAGCGCGGCTTCAAGACAATTGCATCGCTTCAGAACCATCTCAATATGCATAATGGAGTGAAACCTCATGTTTGCAAATTTTGCAACAGCCCCTTTACTACCTCAGGCGAGCTGGTCCGTCATGTACGCTATAAGCACACACACGAAAAACCTCACAAATGTACGGAGTGCGACTACGCTTCGGTCGAACTTTCGAAGCTGCGTAGGCACGTGCGTTGTCATACTGGAGAGAGACCTTACCAGTGTCCACACTGCACGTACGCTTCACCGGACACTTTCAAGCTGAAACGCCATCTCCGTACTCACACTGGTGAAAAACCGTACAAATGTGAACACTGCAACATGTGCTTCACACAATCAAATTCTCTTAAAGCTCATAAGCTTATTCATAATGTGTCTGAAAAGCCGGTCTACGCTTGTGAGTTGTGTCCAACGAAGTGCGGCCGTAAGACTGATCTTCGGATTCATGTGCAGAAACTTCATACATCTGACAAGCCTCTCAAGTGCAAACGATGCGGGAAAACCTTCCCCGACCGTTATTCCTGCAAAATGCACAATAAGACTCACAATGGCGAGAAATGTTACAAGTGCGAATTATGCCCATATGCTTCTACAACACTACGTCACCTCAAATCTCACATGCTCAAGCATACTGATGAAAAACCTTTTTCTTGTGACCAATGCGATCAATCTTTCAGGCAAAAGCAATTGCTACGTCGTCATCAGAACTTGTATCACAATCCTCACTATGTTGCCAAGCCACCAAAGGAGAAAACCCATTCTTGTCATGAATGTAAACGGAATTTTGCCCACAAAGGCAACTTGATTCGGCACCTGGCCACACACGATCCAGAATCTGGCCACCAGGAAAAGTTGCTTGCTCTGAAAATGGGACGTGAAAAGAAAATAAAGTACCTCAATGGACCAATAATCAAAGATAGTGAAAATGACGATCCTGATGTGATCCGTCTTGGACTCGGGACGACCGGTCTGAATTCTAACGATCTGAAACGAGGCGAGCTGGTAACCGTCGCTGACGGTGAAGGACAGCAGTATGTGGTGCTCGAGGTTATACAAATGGAAGATGGATCCGAGCAACAAATTGCTGTTATAACCCCTGATTATCTTGAAGAGGAAGATGAAGCAGAAATGGAAAGTGTAGATTCTGATGATGACAAATCTTCTATAGCACAATCCAGCCAGAAAAGAACCAGGACCATTAAAGTAGAAAACGATGTGGATTCTTGCTTCGGTTTTGATGAAGAGGACGAAGATGAGGAGGAGGGTGAGGATGAAATCGAAAATGAGGAATACAAGGAAGTGGTGCTGCGCATAGTTTAA

Protein

MDEETTTVITMESEDEPDTGVTYFVDEEGRYYYQPTGNNQDLVPLQTEATETTNKDSISDAAEDVLMSNESEQYQTVTLVPSENSGGEVSYVLVVQEETKPINLDIKVDQDEEKVSEDVYNFEEEEIEADVTDEEDESEAKKAQPQTKKGKFLRPCFTCNFCSYSSHRRYLLLRHMKSHSEDRPHKCGVCERGFKTIASLQNHLNMHNGVKPHVCKFCNSPFTTSGELVRHVRYKHTHEKPHKCTECDYASVELSKLRRHVRCHTGERPYQCPHCTYASPDTFKLKRHLRTHTGEKPYKCEHCNMCFTQSNSLKAHKLIHNVSEKPVYACELCPTKCGRKTDLRIHVQKLHTSDKPLKCKRCGKTFPDRYSCKMHNKTHNGEKCYKCELCPYASTTLRHLKSHMLKHTDEKPFSCDQCDQSFRQKQLLRRHQNLYHNPHYVAKPPKEKTHSCHECKRNFAHKGNLIRHLATHDPESGHQEKLLALKMGREKKIKYLNGPIIKDSENDDPDVIRLGLGTTGLNSNDLKRGELVTVADGEGQQYVVLEVIQMEDGSEQQIAVITPDYLEEEDEAEMESVDSDDDKSSIAQSSQKRTRTIKVENDVDSCFGFDEEDEDEEEGEDEIENEEYKEVVLRIV

Uniprot

H9IXV8   A0A212EQN1   S4P6W7   A0A194QU44   A0A194Q006   A0A2A4JJJ8   + More
A0A2A4JJL3   A0A1Y1LDN3   A0A1W4XHP6   A0A067RJF0   A0A2J7RP86   A0A2J7RP88   A0A2J7RP91   A0A2J7RP74   A0A0A9WVG1   D6WGY1   A0A0M9A7V2   A0A146KZS7   A0A232EM32   A0A2J7RP73   A0A2J7RP69   A0A2J7RP79   K7J6A7   A0A2J7RP77   A0A2A3E5D1   A0A2J7RP84   A0A154P0Z7   A0A023F499   A0A1B6GBC7   A0A0C9R886   A0A195E8H6   A0A195BI64   F4WUJ5   A0A151XFY6   V9ICS1   A0A1S4MYV8   A0A3L8E0T1   A0A158NFC7   A0A195CUZ3   A0A151JZH9   E9HLQ9   V9IBE2   A0A2Y9D3V4   A0A0P4Z8B5   A0A0P5JFD5   A0A0N8DSB0   A0A0P5WRX3   A0A0P5VYW8   A0A0P6H035   A0A026WY20   A0A0P5JN62   A0A0P5EBK0   A0A0P5WQB8   A0A0P5I6I8   A0A0N8ADA7   A0A0P5UUN8   A0A0P5D698   A0A0P5APQ7   A0A0P5DAM6   A0A0P5AGC0   A0A0N7ZS77   A0A0P4ZDE1   A0A0P5ZKU6   A0A0P4ZRP2   T1J529   E0VZQ5   E2A6C5   A0A226F1E8   A0A0P5A8I2   A0A0P5A0A5   A0A0N7ZCD1   A0A1D2MLG1   A0A0P4WCR3   A0A0P5WGZ2   A0A0L7R866   A0A0P5BQB3   A0A0P5BKE3   A0A0P6DB89   A0A0P5B319   A0A0P4WVB3   A0A1B6MDV7   A0A0P6FYC7   A0A0P5BKW9   A0A0P5BH40   A0A0P5WH16   A0A0P6GV77   A0A0P4YU25   A0A0P5JL52   A0A0P5YFV0   A0A0P5EPM9   B0WNM2   A0A087TFL3   A0A0P5YFD2   L7M9H2   A0A131XCN3   A0A0P5BCN7   A0A1E1XB36   A0A2R7WI87   A0A224Z9U2   A0A131Z337  

Pubmed

19121390    22118469    23622113    26354079    28004739    24845553    + More
25401762    26823975    18362917    19820115    28648823    20075255    25474469    21719571    20566863    30249741    21347285    21292972    24508170    20798317    27289101    25576852    28503490    28797301    26830274   

EMBL

BABH01015708    AGBW02013268    OWR43787.1    GAIX01004834    JAA87726.1    KQ461108    + More
KPJ09053.1    KQ459593    KPI96750.1    NWSH01001349    PCG71583.1    PCG71582.1    GEZM01062490    GEZM01062489    GEZM01062488    JAV69686.1    KK852434    KDR23947.1    NEVH01002140    PNF42642.1    PNF42644.1    PNF42639.1    PNF42636.1    GBHO01032188    GBHO01032187    GDHC01006733    JAG11416.1    JAG11417.1    JAQ11896.1    KQ971321    EFA00140.2    KQ435729    KOX77649.1    GDHC01017594    JAQ01035.1    NNAY01003435    OXU19423.1    PNF42637.1    PNF42635.1    PNF42645.1    PNF42634.1    KZ288364    PBC26898.1    PNF42643.1    KQ434783    KZC04918.1    GBBI01002873    JAC15839.1    GECZ01016367    GECZ01010186    JAS53402.1    JAS59583.1    GBYB01009097    JAG78864.1    KQ979440    KYN21508.1    KQ976464    KYM84543.1    GL888365    EGI62160.1    KQ982182    KYQ59190.1    JR038910    AEY58452.1    AAZO01006526    QOIP01000001    RLU26324.1    ADTU01014259    ADTU01014260    KQ977279    KYN03984.1    KQ981410    KYN41924.1    GL732680    EFX67330.1    JR038911    AEY58453.1    GDIP01220584    JAJ02818.1    GDIQ01200797    JAK50928.1    GDIP01005767    JAM97948.1    GDIP01083097    JAM20618.1    GDIP01094136    JAM09579.1    GDIQ01026110    JAN68627.1    KK107077    EZA60611.1    GDIQ01200798    JAK50927.1    GDIP01219321    GDIP01143733    GDIP01091438    LRGB01002490    JAJ79669.1    KZS07303.1    GDIP01083098    JAM20617.1    GDIQ01217997    JAK33728.1    GDIP01158681    JAJ64721.1    GDIP01111342    JAL92372.1    GDIP01160282    JAJ63120.1    GDIP01199525    JAJ23877.1    GDIP01158682    JAJ64720.1    GDIP01199524    JAJ23878.1    GDIP01217721    JAJ05681.1    GDIP01215381    JAJ08021.1    GDIP01042941    JAM60774.1    GDIP01208876    JAJ14526.1    JH431850    DS235854    EEB18861.1    GL437123    EFN71010.1    LNIX01000001    OXA63599.1    GDIP01206071    JAJ17331.1    GDIP01206072    JAJ17330.1    GDRN01068984    GDRN01068983    JAI64112.1    LJIJ01000906    ODM93827.1    GDRN01068979    GDRN01068978    JAI64116.1    GDIP01099337    JAM04378.1    KQ414633    KOC67077.1    GDIP01181675    JAJ41727.1    GDIP01183330    JAJ40072.1    GDIQ01081550    JAN13187.1    GDIP01197233    GDIP01195027    JAJ28375.1    GDIP01251117    JAI72284.1    GEBQ01005854    JAT34123.1    GDIQ01041377    JAN53360.1    GDIP01183331    JAJ40071.1    GDIP01184676    JAJ38726.1    GDIP01086194    GDIP01063596    JAM17521.1    GDIQ01049310    JAN45427.1    GDIP01227268    JAI96133.1    GDIQ01223093    JAK28632.1    GDIP01058490    JAM45225.1    GDIP01156787    JAJ66615.1    DS232013    EDS31858.1    KK114993    KFM63902.1    GDIP01058491    JAM45224.1    GACK01005236    JAA59798.1    GEFH01004224    JAP64357.1    GDIP01191675    JAJ31727.1    GFAC01002729    JAT96459.1    KK854826    PTY19051.1    GFPF01012667    MAA23813.1    GEDV01003179    JAP85378.1   

Proteomes

UP000005204    UP000007151    UP000053240    UP000053268    UP000218220    UP000192223    + More
UP000027135    UP000235965    UP000007266    UP000053105    UP000215335    UP000002358    UP000242457    UP000076502    UP000078492    UP000078540    UP000007755    UP000075809    UP000279307    UP000005205    UP000078542    UP000078541    UP000000305    UP000053097    UP000076858    UP000009046    UP000000311    UP000198287    UP000094527    UP000053825    UP000002320    UP000054359   

PRIDE

H9IXV8   

Pfam

PF00096   zf-C2H2        + More
PF00067   p450

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       
IPR001128   Cyt_P450       
IPR036396   Cyt_P450_sf       
IPR000637   HMGI/Y_DNA-bd_CS       

SUPFAM

SSF57667   SSF57667        + More
SSF48264   SSF48264       

Gene 3D

1.10.630.10    

ProteinModelPortal

H9IXV8   A0A212EQN1   S4P6W7   A0A194QU44   A0A194Q006   A0A2A4JJJ8   + More
A0A2A4JJL3   A0A1Y1LDN3   A0A1W4XHP6   A0A067RJF0   A0A2J7RP86   A0A2J7RP88   A0A2J7RP91   A0A2J7RP74   A0A0A9WVG1   D6WGY1   A0A0M9A7V2   A0A146KZS7   A0A232EM32   A0A2J7RP73   A0A2J7RP69   A0A2J7RP79   K7J6A7   A0A2J7RP77   A0A2A3E5D1   A0A2J7RP84   A0A154P0Z7   A0A023F499   A0A1B6GBC7   A0A0C9R886   A0A195E8H6   A0A195BI64   F4WUJ5   A0A151XFY6   V9ICS1   A0A1S4MYV8   A0A3L8E0T1   A0A158NFC7   A0A195CUZ3   A0A151JZH9   E9HLQ9   V9IBE2   A0A2Y9D3V4   A0A0P4Z8B5   A0A0P5JFD5   A0A0N8DSB0   A0A0P5WRX3   A0A0P5VYW8   A0A0P6H035   A0A026WY20   A0A0P5JN62   A0A0P5EBK0   A0A0P5WQB8   A0A0P5I6I8   A0A0N8ADA7   A0A0P5UUN8   A0A0P5D698   A0A0P5APQ7   A0A0P5DAM6   A0A0P5AGC0   A0A0N7ZS77   A0A0P4ZDE1   A0A0P5ZKU6   A0A0P4ZRP2   T1J529   E0VZQ5   E2A6C5   A0A226F1E8   A0A0P5A8I2   A0A0P5A0A5   A0A0N7ZCD1   A0A1D2MLG1   A0A0P4WCR3   A0A0P5WGZ2   A0A0L7R866   A0A0P5BQB3   A0A0P5BKE3   A0A0P6DB89   A0A0P5B319   A0A0P4WVB3   A0A1B6MDV7   A0A0P6FYC7   A0A0P5BKW9   A0A0P5BH40   A0A0P5WH16   A0A0P6GV77   A0A0P4YU25   A0A0P5JL52   A0A0P5YFV0   A0A0P5EPM9   B0WNM2   A0A087TFL3   A0A0P5YFD2   L7M9H2   A0A131XCN3   A0A0P5BCN7   A0A1E1XB36   A0A2R7WI87   A0A224Z9U2   A0A131Z337  

PDB

5YEF     E-value=1.52351e-53,     Score=532

KEGG

101744433    K23195 transcriptional repressor CTCF | (RefSeq) transcriptional repressor CTCF

GO

GO:0003676   GO:0016021   GO:0016705   GO:0005506   GO:0020037   GO:0005634   GO:0006355   GO:0046872   GO:0006313   GO:0008081   GO:0005524   GO:0048013   GO:0005003   GO:0005887   GO:0007169  

Length:

636

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0026

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00121

outside

1  -  636

 

 

Pi

24.787022

Theta

17.053937

Tajima's D

-1.637643

CLR

0.151374

CSRT

0.0430978451077446

Interpretation

Uncertain