Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
---|---|---|---|---|---|
KWMTBOMO15713 | MYB | 9.2e-07 | 0.17 | 4 | + View |
HMM length of domain: 47 aa c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs. i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. Domain annotation for each sequence: # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to -- ----- ---- -------- -------- ------- ------ ------- ------ --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 12.0 0.1 0.00017 0.17 20 47 107 132 2 11.1 0.2 0.00033 0.33 24 47 204 226 3 3.9 0.0 0.056 55 23 47 294 317 4 1.5 0.0 0.33 3.3e+02 22 47 393 416 Alignments for each domain: == domain 1 score: 12.0 bits; conditional E-value: 0.00017 TTTTHHHHHHHHSSS-HHHHHHHHHHHT CS MYB 20 GngnWkkIakelggRtakqcrsrwqnyl 47 + W Ia+++g+ ta +c +++n++ KWMTBOMO15713 107 KTL-WHDIASHVGT-TADECCKKYRNLR 132 445.********98.9*********985 PP == domain 2 score: 11.1 bits; conditional E-value: 0.00033 HHHHHHHHSSS-HHHHHHHHHHHT CS MYB 24 WkkIakelggRtakqcrsrwqnyl 47 Wk+Ia e+g+ t+ +c ++++n++ KWMTBOMO15713 204 WKEIALEIGT-TEYNCYHKFKNMK 226 ********98.**********975 PP == domain 3 score: 3.9 bits; conditional E-value: 0.056 THHHHHHHHSSS-HHHHHHHHHHHT CS MYB 23 nWkkIakelggRtakqcrsrwqnyl 47 Wk+I++ +g + +c +++n++ KWMTBOMO15713 294 LWKEISETVGE-NPPDCEKKFRNLK 317 7********94.4558******986 PP == domain 4 score: 1.5 bits; conditional E-value: 0.33 TTHHHHHHHHSSS-HHHHHHHHHHHT CS MYB 22 gnWkkIakelggRtakqcrsrwqnyl 47 Wkk + ++ ++ +c +++n++ KWMTBOMO15713 393 L-WKKLSPQI-LLSPDECDRKFRNLK 416 4.99988888.69***********86 PP |
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