Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
---|---|---|---|---|---|
KWMTBOMO15203 | zf-C2H2 | 3.3e-12 | 0.00051 | 5 | + View |
HMM length of domain: 23 aa c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs. i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. Domain annotation for each sequence: # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to -- ----- ---- -------- -------- ------- ------ ------- ------ --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 14.5 0.4 0.00058 0.035 1 20 97 116 2 20.3 0.8 8.6e-06 0.00051 2 23 182 204 3 15.8 0.7 0.00023 0.014 2 23 212 234 4 8.0 8.8 0.066 3.9 1 23 241 264 5 15.8 1.3 0.00022 0.013 2 23 272 295 Alignments for each domain: == domain 1 score: 14.5 bits; conditional E-value: 0.00058 EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFkrksnLkrHi 20 +kC++C +F + +L++H+ KWMTBOMO15203 97 FKCHICQTVFQERKLLQVHR 116 8******************7 PP == domain 2 score: 20.3 bits; conditional E-value: 8.6e-06 EETTTTEEESSHHHHHHHHHC.C CS zf-C2H2 2 kCpdCgksFkrksnLkrHirt.H 23 +C +C+++Fk+k Lk Hi+ H KWMTBOMO15203 182 TCQICNRTFKSKLTLKEHIKLvH 204 8*******************999 PP == domain 3 score: 15.8 bits; conditional E-value: 0.00023 EETTTTEEESSHHHHHHHHHC.C CS zf-C2H2 2 kCpdCgksFkrksnLkrHirt.H 23 +C+ Cg++F++ L +H r H KWMTBOMO15203 212 QCELCGQKFRSLKYLANHKRNvH 234 7*******************988 PP == domain 4 score: 8.0 bits; conditional E-value: 0.066 EEETTTTEEESSHHHHHHHHHC.C CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23 +kC++Cgk Fk++ +H++ H KWMTBOMO15203 241 HKCTVCGKEFKSRLCVHQHMKHvH 264 79*****************99888 PP == domain 5 score: 15.8 bits; conditional E-value: 0.00022 EETTTT.EEESSHHHHHHHHHC.C CS zf-C2H2 2 kCpdCg.ksFkrksnLkrHirt.H 23 +Cp+C+ k Fk++ nL +H+++ H KWMTBOMO15203 272 VCPHCPnKIFKSSINLHQHLKVaH 295 7********************999 PP |
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