HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	13.4	1.5	0.0013	0.079	2	23	16	37
2	6.9	5.4	0.15	8.8	1	23	46	68
3	18.0	0.5	4.4e-05	0.0026	2	23	112	133
4	14.0	4.7	0.00082	0.049	1	23	150	172
5	22.8	0.4	1.3e-06	8e-05	1	23	178	200
6	25.5	3.5	1.9e-07	1.1e-05	1	23	206	229

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 0.0013
                   EETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2  2 kCpdCgksFkrksnLkrHirtH 23
                    Cp C+k+F +   L+rH  +H
  KWMTBOMO14837 16 SCPACPKRFHSERKLQRHAARH 37
                   6******************999 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.15
                   EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2  1 ykCpdCgksFkrksnLkrHirtH 23
                   y+Cp+C  +F ++++   H+++H
  KWMTBOMO14837 46 YECPVCAHMFHTRYHALMHLKSH 68
                   99*******************99 PP

  == domain 3  score: 18.0 bits;  conditional E-value: 4.4e-05
                    EETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   2 kCpdCgksFkrksnLkrHirtH 23 
                    +C++Cg++F + + L+ H+++H
  KWMTBOMO14837 112 VCNICGEVFQHFYYLEEHLKSH 133
                    6*******************99 PP

  == domain 4  score: 14.0 bits;  conditional E-value: 0.00082
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y+C++C ksFk  + Lk H  tH
  KWMTBOMO14837 150 YTCTVCQKSFKLHYYLKLHGYTH 172
                    9******************9888 PP

  == domain 5  score: 22.8 bits;  conditional E-value: 1.3e-06
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y C  Cgk F +k  LkrH+ tH
  KWMTBOMO14837 178 YICQQCGKGFITKGKLKRHLETH 200
                    89********************9 PP

  == domain 6  score: 25.5 bits;  conditional E-value: 1.9e-07
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    y+C++C k F+r+s L+ H rt H
  KWMTBOMO14837 206 YQCHICYKFFTRPSYLRIHVRTiH 229
                    9*********************99 PP