HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	11.4	1.1	0.0056	0.33	1	23	235	257
2	7.2	0.1	0.12	7	3	23	282	303
3	16.4	0.1	0.00015	0.0087	2	23	325	346
4	12.0	0.7	0.0035	0.21	2	23	351	372
5	11.2	0.3	0.0066	0.39	1	23	379	402

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.0056
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y+C +C   F+++ +L+ H  +H
  KWMTBOMO14591 235 YYCYYCRDQFTNPGELREHTLSH 257
                    89******************999 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.12
                    ETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   3 CpdCgksFkrksnLkrHirt.H 23 
                    C  C+ s  + +++k+Hi++ H
  KWMTBOMO14591 282 CRLCDVSIDSIDSFKKHISSvH 303
                    99*****************999 PP

  == domain 3  score: 16.4 bits;  conditional E-value: 0.00015
                    EETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   2 kCpdCgksFkrksnLkrHirtH 23 
                    +C++Cg +F+  + Lk+H+  H
  KWMTBOMO14591 325 VCTECGSVFPYFDALKKHMIDH 346
                    7******************988 PP

  == domain 4  score: 12.0 bits;  conditional E-value: 0.0035
                    EETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   2 kCpdCgksFkrksnLkrHirtH 23 
                    +C++Cg +F  + +L++Hi++H
  KWMTBOMO14591 351 TCDICGACFLEPNSLRTHIKSH 372
                    7********************9 PP

  == domain 5  score: 11.2 bits;  conditional E-value: 0.0066
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    y+C++Cgk  k+k++   H  t H
  KWMTBOMO14591 379 YPCEVCGKNLKSKYSKYLHVATvH 402
                    99*************999999988 PP