HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	7.0	1.1	0.14	8.3	1	23	268	292
2	10.9	1.2	0.0081	0.49	3	23	365	385
3	17.6	0.3	5.9e-05	0.0035	1	23	389	411
4	14.1	2.7	0.00077	0.046	1	23	416	439
5	3.6	0.8	1.6	98	1	23	445	468
6	9.0	0.1	0.033	2	2	23	476	498
7	18.3	0.2	3.5e-05	0.0021	1	23	503	526
8	9.3	0.2	0.026	1.6	1	20	787	806

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.14
                    EEETTTT.EEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCg.ksFkrksnLkrHirt.H 23 
                    + C +C+   F   ++L++H r+ H
  KWMTBOMO14587 268 FSCAYCTeVYFHAADELRNHTRMnH 292
                    89*****8889999********999 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.0081
                    ETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   3 CpdCgksFkrksnLkrHirtH 23 
                    C  C++ F++  +L +H+++H
  KWMTBOMO14587 365 CVLCKQHFTNYVQLDVHMNSH 385
                    99*****************99 PP

  == domain 3  score: 17.6 bits;  conditional E-value: 5.9e-05
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y+C+dCg++F +   Lk+H ++H
  KWMTBOMO14587 389 YVCDDCGQTFISAARLKNHSKKH 411
                    9*******************999 PP

  == domain 4  score: 14.1 bits;  conditional E-value: 0.00077
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    y C++C+k+F+ k+  k+H  + H
  KWMTBOMO14587 416 YSCKYCNKVFTLKHYVKKHEAVvH 439
                    89*****************88777 PP

  == domain 5  score: 3.6 bits;  conditional E-value: 1.6
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    ykC +C+++ ++  + k Hi   H
  KWMTBOMO14587 445 YKCYHCPERLPSDKERKEHIEAnH 468
                    9*******9999999999987655 PP

  == domain 6  score: 9.0 bits;  conditional E-value: 0.033
                    EETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   2 kCpdCgksFkrksnLkrHirt.H 23 
                    +C++Cgk F+ +  +  H+r+ H
  KWMTBOMO14587 476 TCDICGKIFNWRQYYIGHLRKvH 498
                    8********99999999999988 PP

  == domain 7  score: 18.3 bits;  conditional E-value: 3.5e-05
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    y C+ C+k+F ++++LkrHi   H
  KWMTBOMO14587 503 YACTACDKKFAQRDDLKRHIEArH 526
                    88*****************98766 PP

  == domain 8  score: 9.3 bits;  conditional E-value: 0.026
                    EEETTTTEEESSHHHHHHHH CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHi 20 
                    y+C +C + F + ++L++H+
  KWMTBOMO14587 787 YPCFYCREIFGSMDDLRAHQ 806
                    99*****************8 PP