HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	16.9	0.6	0.0001	0.006	2	23	103	127
2	15.3	0.5	0.00033	0.02	3	23	174	195
3	4.1	1.3	1.1	68	2	23	197	224
4	4.0	0.0	1.3	77	9	23	240	255

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 0.0001
                    EETTTT..EEESSHHHHHHHHHC.C CS
        zf-C2H2   2 kCpdCg..ksFkrksnLkrHirt.H 23 
                    +C++C+   +F++ s+L+ H+r+ H
  KWMTBOMO10214 103 RCKICDkiPPFRNFSLLNDHMRRvH 127
                    7**********************99 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 0.00033
                    ETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   3 CpdCgksFkrksnLkrHirt.H 23 
                    C+ C k+F ++++L rH+r+ H
  KWMTBOMO10214 174 CEFCEKRFMDPDELYRHLRKeH 195
                    99******************99 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 1.1
                    EETTTT.....EEESSHHHHHHHHHC.C CS
        zf-C2H2   2 kCpdCg.....ksFkrksnLkrHirt.H 23 
                    +C+ C+       + + s L +H r+ H
  KWMTBOMO10214 197 YCHLCDadgknFYYASHSALAQHFRKdH 224
                    6********9999999999****99988 PP

  == domain 4  score: 4.0 bits;  conditional E-value: 1.3
                    EESSHHHHHHHHHC.C CS
        zf-C2H2   9 sFkrksnLkrHirt.H 23 
                    +F++  +Lk+Hi t H
  KWMTBOMO10214 240 VFRSEIDLKAHIATtH 255
                    7999*********999 PP