渝公网安备 50010602502065号
| Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
|---|---|---|---|---|---|
| KWMTBOMO06195 | zf-C2H2 | 1.1e-19 | 0.0018 | 18 | + View |
HMM length of domain: 23 aa
c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified.
Domain annotation for each sequence:
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to
-- ----- ---- -------- -------- ------- ------ ------- ------
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 1.5 0.4 7.7 4.6e+02 1 23 205 227
2 2.4 0.2 4.1 2.5e+02 1 23 235 257
3 1.5 3.8 7.7 4.6e+02 1 23 261 284
4 2.4 5.0 3.9 2.3e+02 1 23 294 316
5 16.0 0.3 0.00019 0.012 2 23 320 342
6 10.8 1.2 0.0087 0.52 1 23 349 372
7 11.5 0.1 0.0051 0.3 1 23 409 432
8 14.3 2.2 0.00067 0.04 1 19 438 456
9 15.5 0.1 0.00028 0.017 3 23 472 492
10 10.1 3.9 0.015 0.87 1 23 1569 1591
11 6.6 0.7 0.18 11 1 23 1595 1618
12 3.9 2.7 1.3 78 1 23 1630 1654
13 15.5 0.9 0.00027 0.016 2 23 1659 1681
14 10.4 2.2 0.011 0.68 1 23 1688 1711
15 18.5 2.8 3e-05 0.0018 1 23 1716 1739
16 11.4 1.0 0.0056 0.34 3 23 1767 1788
17 14.8 4.3 0.00047 0.028 3 23 1800 1820
18 11.5 0.5 0.0053 0.32 2 23 1827 1849
Alignments for each domain:
== domain 1 score: 1.5 bits; conditional E-value: 7.7
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
ykC+ C F + ++ Hi++H
KWMTBOMO06195 205 YKCDLCVVGFATETIYQGHIQKH 227
9******9999999999999995 PP
== domain 2 score: 2.4 bits; conditional E-value: 4.1
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
+ C++C+ + ++ L+ H+r+H
KWMTBOMO06195 235 FSCDICDSVLNSIPILREHRRRH 257
89*****9999999999999999 PP
== domain 3 score: 1.5 bits; conditional E-value: 7.7
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
++C +C k++ ++++ ++H++ H
KWMTBOMO06195 261 FECQICLKRYHDSYSAVQHYNDcH 284
89*****************98777 PP
== domain 4 score: 2.4 bits; conditional E-value: 3.9
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
y C +C+ ++ +++ H+++H
KWMTBOMO06195 294 YNCRECNFNTNSYRSYRYHRSKH 316
89*******************99 PP
== domain 5 score: 16.0 bits; conditional E-value: 0.00019
EETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 2 kCpdCgksFkrksnLkrHirt.H 23
+C+ Cg F ++s+Lk H+ t H
KWMTBOMO06195 320 TCDLCGNIFVTNSSLKIHMLTkH 342
7********************99 PP
== domain 6 score: 10.8 bits; conditional E-value: 0.0087
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
y C+ C k++k+ks L +H ++ H
KWMTBOMO06195 349 YNCELCAKVYKSKSGLHSHNSSaH 372
89*****************88877 PP
== domain 7 score: 11.5 bits; conditional E-value: 0.0051
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
++C dC +F +k +L++Hi H
KWMTBOMO06195 409 FECADCEGKFANKQSLRSHIEWeH 432
89******************8877 PP
== domain 8 score: 14.3 bits; conditional E-value: 0.00067
EEETTTTEEESSHHHHHHH CS
zf-C2H2 1 ykCpdCgksFkrksnLkrH 19
++C +C+k+F+++ +Lk+H
KWMTBOMO06195 438 HRCVKCDKVFRSSASLKKH 456
79***************** PP
== domain 9 score: 15.5 bits; conditional E-value: 0.00028
ETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 3 CpdCgksFkrksnLkrHirtH 23
C++Cg+ F+++s L++H+r H
KWMTBOMO06195 472 CDYCGEAFTTNSILMSHLRAH 492
*******************99 PP
== domain 10 score: 10.1 bits; conditional E-value: 0.015
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
y C +C+++Fk s++ H++ H
KWMTBOMO06195 1569 YLCQICTQVFKAHSEYLYHQKNH 1591
66********************6 PP
== domain 11 score: 6.6 bits; conditional E-value: 0.18
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
y C +Cgk+++ ++ ++H++t H
KWMTBOMO06195 1595 YICVVCGKRYRGLESCVVHYNTeH 1618
89*****************99999 PP
== domain 12 score: 3.9 bits; conditional E-value: 1.3
EEET..TTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCp..dCgksFkrksnLkrHirtH 23
y C +C + + ks +++H +H
KWMTBOMO06195 1630 YCCAntECYFTTSKKSAYTKHVASH 1654
667799****************999 PP
== domain 13 score: 15.5 bits; conditional E-value: 0.00027
EETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 2 kCpdCgksFkrksnLkrHirt.H 23
+C++C k F +++ L+ Hir+ H
KWMTBOMO06195 1659 ECGICYKQFANNHTLTLHIRKvH 1681
5********************99 PP
== domain 14 score: 10.4 bits; conditional E-value: 0.011
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
+kC Cg +k++ Lk+H ++ H
KWMTBOMO06195 1688 FKCQLCGNEYKSRGGLKHHTSStH 1711
8*******************9988 PP
== domain 15 score: 18.5 bits; conditional E-value: 3e-05
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
y+Cp Cgk F++k+ L++H + H
KWMTBOMO06195 1716 YYCPQCGKEFNSKYTLRNHAKHlH 1739
99*****************99888 PP
== domain 16 score: 11.4 bits; conditional E-value: 0.0056
ETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 3 CpdCgksFkrksnLkrHirt.H 23
C +C k F++ +Lk+H ++ H
KWMTBOMO06195 1767 CRECLKIFRTETLLKKHVKRsH 1788
99*****************999 PP
== domain 17 score: 14.8 bits; conditional E-value: 0.00047
ETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 3 CpdCgksFkrksnLkrHirtH 23
C+ Cgk +++k +L H+rtH
KWMTBOMO06195 1800 CHQCGKEYRHKKSLIEHLRTH 1820
********************9 PP
== domain 18 score: 11.5 bits; conditional E-value: 0.0053
EETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 2 kCpdCgksFkrksnLkrHirt.H 23
C++Cg +F + +L +H r+ H
KWMTBOMO06195 1827 SCKECGVTFAHAASLYTHNRMvH 1849
6******************9999 PP
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渝公网安备 50010602502065号