HMM length of domain: 297 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	167.9	5.2	2e-53	3.3e-49	86	295	15	227
2	1.8	6.1	0.008	1.4e+02	120	166	252	295

  Alignments for each domain:
  == domain 1  score: 167.9 bits;  conditional E-value: 2e-53
         LRRFIP  86 elkeslaeveEkyrKAmvsnAQLDNeKsallYevdlLkdkleeleeslaelqrelrekckelerlkrqlealkleldelkeklkqrdeLiedhglv 181
                      k++l+eveEk+rKAm+ nAQLDN+K+al Y+ +lLkd++eel e++a+lqre++ekc  +erlkr++  +++el+  +++++ rd   +d+g  
  KWMTBOMO05989  15 SKKHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELGEEYAQLQREHKEKCSTHERLKREHASVERELEAARAAIRARDAAAADAGFA 110
                    569********************************************************************************************* PP

         LRRFIP 182 lveeeaddge........keeessssskaalvskeaaellekagegtldvrLkklveekeeLleeveklkqqleeekskksssasseeleseeeen 269
                     ve  a               + + ++  alvs+ a +ll+++gegtldvrL+klv  k+ L +ev+klk ql+ee+  +++  +++  +++e e+
  KWMTBOMO05989 111 FVEAAAPPAPpraapadpPPDPAAPAPLLALVSHAAHQLLDDVGEGTLDVRLQKLVSSKQALESEVRKLKIQLNEERAARQNGVANH--HDQEYED 204
                    ****999988999998554445555667899**********************************************8776666666..3333343 PP

         LRRFIP 270 dleiqrdankqlsdyKfklqkaEqei 295
                    +le     +k +s+ + ++++aE e 
  KWMTBOMO05989 205 ELE---TLRKSVSEARGRAARAEAEA 227
                    344...567789***********986 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.008
         LRRFIP 120 dlLkdkleeleeslaelqrelrekckelerlkrqlealkleldelke 166
                    d L d+l   +++   lqre+re  + +e+l ++ ++l++ ld+lk+
  KWMTBOMO05989 252 DQLEDQL---NQERRRLQRETREALNRVEELETENSHLTKRLDKLKN 295
                    3333333...2334557778888888888888888888888887775 PP