Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
---|---|---|---|---|---|
KWMTBOMO01850 | GCM | 8.3e-73 | 1.4e-72 | 1 | + View |
HMM length of domain: 140 aa c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs. i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. Domain annotation for each sequence: # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to -- ----- ---- -------- -------- ------- ------ ------- ------ --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 242.1 4.7 8.1e-77 1.4e-72 1 140 32 172 Alignments for each domain: == domain 1 score: 242.1 bits; conditional E-value: 8.1e-77 -----SS--SS-EE--BTT-HHHHTT--SS-EEEE--S-TT-EEEEE--EEEETT----SSS---EE---SSHHHHHHHHHSB-SS..S--B.EEE CS GCM 1 ldefeewadgevrliyssedeearkhlsgwamrntnnhnskilkksclGvlvcskectlpngekiklrpaicdkarkkqqkkkcpnksckgk.lel 95 +d+f ew dg+vr++y ++eear+h+sgwamrntnnhn++ilkksclGvlvcs +c+lp+g++++lrpaicdkarkkqq+k cpn+ c+g le+ KWMTBOMO01850 32 FDAFGEWCDGHVRRVYPPACEEARRHASGWAMRNTNNHNVHILKKSCLGVLVCSVRCRLPDGSRVHLRPAICDKARKKQQGKPCPNRLCNGGrLEV 127 799**************************************************************************************9755*** PP E---TBTTB--EEEEEE-SSBEEEEEE----S-----HHHHHHHH CS GCM 96 kkcrGhsGypvthfwreedkaiffqakGvhdhprpeakasaearr 140 ++crGh+Gypvthfwr++++aiffqakG+hdhprpeak ++e+rr KWMTBOMO01850 128 QPCRGHCGYPVTHFWRHTEHAIFFQAKGSHDHPRPEAKGASEVRR 172 *****************************************9986 PP |
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