Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
---|---|---|---|---|---|
KWMTBOMO00166 | zf-C2H2 | 4.9e-26 | 2.8e-06 | 5 | + View |
HMM length of domain: 23 aa c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs. i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. Domain annotation for each sequence: # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to -- ----- ---- -------- -------- ------- ------ ------- ------ --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 26.1 1.7 1.2e-07 7.1e-06 1 23 37 59 2 13.1 0.0 0.0016 0.096 2 23 69 90 3 21.9 0.3 2.6e-06 0.00016 1 23 94 116 4 27.4 0.6 4.7e-08 2.8e-06 3 23 124 144 5 16.4 1.8 0.00015 0.0087 1 20 150 169 Alignments for each domain: == domain 1 score: 26.1 bits; conditional E-value: 1.2e-07 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 y+C++Cgk++ ++snL rH +tH KWMTBOMO00166 37 YTCSECGKRYATSSNLSRHKQTH 59 9*********************9 PP == domain 2 score: 13.1 bits; conditional E-value: 0.0016 EETTTTEEESSHHHHHHHHHCC CS zf-C2H2 2 kCpdCgksFkrksnLkrHirtH 23 +C++Cgk + + L H tH KWMTBOMO00166 69 RCGECGKAYVSMPALAMHVLTH 90 7*******************99 PP == domain 3 score: 21.9 bits; conditional E-value: 2.6e-06 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 ++C++Cgk F+r+ +L+ H+r+H KWMTBOMO00166 94 HVCGVCGKLFSRPWLLQGHLRSH 116 79********************9 PP == domain 4 score: 27.4 bits; conditional E-value: 4.7e-08 ETTTTEEESSHHHHHHHHHCC CS zf-C2H2 3 CpdCgksFkrksnLkrHirtH 23 C +Cgk F ++snL++H++tH KWMTBOMO00166 124 CAHCGKAFADRSNLRAHMQTH 144 99******************9 PP == domain 5 score: 16.4 bits; conditional E-value: 0.00015 EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFkrksnLkrHi 20 ++C+ C+k+F ks L++H+ KWMTBOMO00166 150 FECSRCHKTFALKSYLNKHQ 169 89*****************8 PP |
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