HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	19.1	1.3	2e-05	0.0012	1	23	78	101
2	22.9	0.5	1.2e-06	7.2e-05	1	23	112	134
3	26.1	1.5	1.2e-07	7.4e-06	1	23	140	162
4	18.0	2.5	4.4e-05	0.0027	1	23	168	190

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 2e-05
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    y+C+ Cg++F+  + L +Hi + H
  KWMTBOMO00050  78 YTCETCGQTFTMHDRLAKHIASrH 101
                    9*******************9988 PP

  == domain 2  score: 22.9 bits;  conditional E-value: 1.2e-06
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y+C++C ++F r+++L+rH r H
  KWMTBOMO00050 112 YECEVCLRRFARSDMLTRHARLH 134
                    99*******************99 PP

  == domain 3  score: 26.1 bits;  conditional E-value: 1.2e-07
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y C+ Cg++F+r+++L +H+rtH
  KWMTBOMO00050 140 YSCSACGQVFSRSDHLATHQRTH 162
                    89********************9 PP

  == domain 4  score: 18.0 bits;  conditional E-value: 4.4e-05
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y+Cp C++  +r+++ +rH+rtH
  KWMTBOMO00050 168 YRCPSCPYAACRRDMITRHMRTH 190
                    9*********************9 PP