SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16862
Annotation
Alpha-(1?3)-fucosyltransferase_C_[Papilio_xuthus]
Full name
Alpha-(1,3)-fucosyltransferase C      
Alternative Name
Galactoside 3-L-fucosyltransferase
Location in the cell
Nuclear   Reliability : 2.158
 

Sequence

CDS
ATGCACTGGATGAAAATTGAAGACATGGAACCGGTCAGCGAAGATTTCAAAATACAGTTAAAGTCTAAGTCTAAGGCCGCAGCGTGGTTTGTGTCAAATTGTTACACAAGAAGCAAAAGGGAAGATTTCGCTAATGAACTTCAAGTTGAACTGAAAAAGCACAATTTAGAACTAGATATCTATGGCAGATGTGGAAACCTTAAATGTTCCCGGGATACAGAAGAGGCATGTGATGAAATGATCAGAGAAAAATATTACTTTTACTTGTCGTTTGAAAACTCATTTGGTGAAGATTATGTCACAGAAAAATTATTACATGCCTTAGAATTCGACGCTGTTCCTGTAGTGTATGGCGGTGCTAACTACACCAGGTAA
Protein
MHWMKIEDMEPVSEDFKIQLKSKSKAAAWFVSNCYTRSKREDFANELQVELKKHNLELDIYGRCGNLKCSRDTEEACDEMIREKYYFYLSFENSFGEDYVTEKLLHALEFDAVPVVYGGANYTR

Summary

Similarity
Belongs to the glycosyltransferase 10 family.
Keywords
Complete proteome   Glycoprotein   Glycosyltransferase   Golgi apparatus   Membrane   Reference proteome   Signal-anchor   Transferase   Transmembrane   Transmembrane helix  
Feature
chain  Alpha-(1,3)-fucosyltransferase C
EC Number
2.4.1.-
EMBL
NWSH01002952    PCG67232.1    KQ459603    KPI93062.1    ODYU01003079    SOQ41387.1    + More
KQ461137    KPJ08813.1    JTDY01006679    KOB65782.1    RSAL01000031    RVE51638.1    JTDY01012912    KOB52215.1    AGBW02008995    OWR51946.1    JTDY01009552    KOB63349.1    JTDY01010816    KOB57987.1    ODYU01013118    SOQ59805.1    NWSH01003936    PCG65654.1    KQ461108    KPJ09317.1    AGBW02010446    OWR48495.1    BABH01022215    RVE51643.1    PCG67231.1    KQ459594    KPI96064.1    ODYU01001860    SOQ38649.1    OWR51947.1    RVE51644.1    RVE51640.1    ODYU01003471    SOQ42305.1    JTDY01003799    KOB68987.1    KQ460627    KPJ13479.1    ODYU01010180    SOQ55129.1    BABH01022242    JTDY01005919    KOB66482.1    RSAL01000116    RVE46859.1    PCG67233.1    JTDY01001718    KOB73086.1    RVE51642.1    RVE51641.1    RSAL01000016    RVE53056.1    KPJ13478.1    RSAL01000164    RVE45329.1    KQ459585    KPI98210.1    KZ150145    PZC72905.1    AGBW02010417    OWR48543.1    OWR48542.1    KPJ13477.1    KZ149916    PZC77942.1    ODYU01001405    SOQ37538.1    AGBW02011221    OWR47017.1    NWSH01004327    PCG65224.1    KOB65783.1    JTDY01001793    KOB72859.1    AGBW02010111    OWR49153.1    PCG65653.1    GFDF01001491    JAV12593.1    GFDF01001577    JAV12507.1    RVE53051.1    CH954180    EDV47679.1    GFDF01001492    JAV12592.1    ODYU01000952    SOQ36489.1    GFDF01001578    JAV12506.1    GFDF01001507    JAV12577.1    GDIQ01211408    JAK40317.1    QCYY01000951    ROT81568.1    BDGG01000008    GAV02281.1    GDIQ01032531    JAN62206.1    AJVK01015359    AJVK01015360    GDIQ01100861    JAL50865.1    GL888602    EGI59184.1    CH916370    EDW00427.1    KQ971354    EFA05856.1    GDIP01189992    JAJ33410.1    GDIP01047713    JAM56002.1    GDIQ01137186    JAL14540.1    CH940651    EDW65403.1    GDIP01187438    JAJ35964.1    NWSH01000372    PCG76878.1    GDIQ01183331    JAK68394.1    GDIQ01233708    JAK18017.1    GDIP01161850    JAJ61552.1    CH933810    EDW07281.1    CH479194    EDW27021.1    GDIP01223670    JAI99731.1    GDIP01149807    JAJ73595.1    GDIP01144206    JAJ79196.1    GDIP01087956    JAM15759.1    AJ302047    AE014298    BT099899    ACX30061.1    AJWK01014240    GBXI01000421    JAD13871.1    GDIP01228135    JAI95266.1    GDIP01071911    JAM31804.1    AJWK01014233    ODYU01008712    SOQ52539.1    GDIQ01217631    JAK34094.1    GL732598    EFX72552.1    GDIQ01069647    JAN25090.1    PZC77933.1   
Pfam
PF17039   Glyco_tran_10_N        + More
PF00852   Glyco_transf_10
Interpro
IPR038577   GT10-like_sf        + More
IPR001503   Glyco_trans_10       
IPR031481   Glyco_tran_10_N       
Gene 3D

Ontologies

Topology

Subcellular location
  
Length:
124
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00597
Exp number, first 60 AAs:
0
Total prob of N-in:
0.31425
outside
1  -  124
 
 

Population Genetic Test Statistics

Pi
0
Theta
0
Tajima's D
0
CLR
0
CSRT
0
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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