SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16861
Annotation
Alpha-(1?3)-fucosyltransferase_C_[Papilio_xuthus]
Full name
Alpha-(1,3)-fucosyltransferase C      
Alternative Name
Galactoside 3-L-fucosyltransferase
Location in the cell
Nuclear   Reliability : 1.901
 

Sequence

CDS
ATGGAACCGGTCAGCGAAGATTTCAAAATACAGTTAAAGTCTAAGTCTAAGGCCGCAGCGTGGTTTGTGTCAAATTGTTACACAAGAAGCAAAAGGGAAGATTTCGCTAATGAACTTCAAGTTGAACTGAAAAAGCACAATTTAGAACTAGATATCTATGGCAGATGTGGAAACCTTAAATGTTCCCGGGATACAGAAGAGGCATGTGATGAAATGATCAGAGAAAAATATTACTTTTACTTGTCGTTTGAAAACTCATTTGGTGAAGATTATGTCACAGAAAAATTATTACATGCCTTAGAATTCGACGCTGTTCCTGTAGTGTATGGCGGTGCTAACTACACCAGGTAA
Protein
MEPVSEDFKIQLKSKSKAAAWFVSNCYTRSKREDFANELQVELKKHNLELDIYGRCGNLKCSRDTEEACDEMIREKYYFYLSFENSFGEDYVTEKLLHALEFDAVPVVYGGANYTR

Summary

Similarity
Belongs to the glycosyltransferase 10 family.
Keywords
Complete proteome   Glycoprotein   Glycosyltransferase   Golgi apparatus   Membrane   Reference proteome   Signal-anchor   Transferase   Transmembrane   Transmembrane helix  
Feature
chain  Alpha-(1,3)-fucosyltransferase C
EC Number
2.4.1.-
EMBL
KQ459603    KPI93062.1    NWSH01002952    PCG67232.1    ODYU01003079    SOQ41387.1    + More
KQ461137    KPJ08813.1    AGBW02008995    OWR51946.1    JTDY01006679    KOB65782.1    JTDY01012912    KOB52215.1    RSAL01000031    RVE51638.1    JTDY01009552    KOB63349.1    JTDY01010816    KOB57987.1    AGBW02010446    OWR48495.1    BABH01022215    ODYU01013118    SOQ59805.1    PCG67231.1    KQ461108    KPJ09317.1    KQ459594    KPI96064.1    KQ460627    KPJ13479.1    NWSH01003936    PCG65654.1    ODYU01001860    SOQ38649.1    RVE51643.1    RVE51640.1    BABH01022242    OWR51947.1    JTDY01005919    KOB66482.1    ODYU01010180    SOQ55129.1    RVE51644.1    JTDY01001718    KOB73086.1    ODYU01003471    SOQ42305.1    RSAL01000116    RVE46859.1    RSAL01000164    RVE45329.1    KPJ13478.1    KQ459585    KPI98210.1    AGBW02010417    OWR48543.1    RSAL01000016    RVE53056.1    OWR48542.1    ODYU01001405    SOQ37538.1    KPJ13477.1    JTDY01003799    KOB68987.1    RVE51642.1    AGBW02011221    OWR47017.1    KZ149916    PZC77942.1    RVE51641.1    NWSH01004327    PCG65224.1    JTDY01001793    KOB72859.1    PCG67233.1    AGBW02010111    OWR49153.1    KZ150145    PZC72905.1    CH954180    EDV47679.1    KOB65783.1    GFDF01001491    JAV12593.1    CH916370    EDW00427.1    GFDF01001577    JAV12507.1    GDIP01187438    JAJ35964.1    CH940651    EDW65403.1    QCYY01000951    ROT81568.1    GDIQ01211408    JAK40317.1    BDGG01000008    GAV02281.1    GDIQ01100861    JAL50865.1    GDIQ01032531    JAN62206.1    KQ971354    EFA05856.1    CH933810    EDW07281.1    GDIQ01137186    JAL14540.1    CH479194    EDW27021.1    GDIQ01233708    JAK18017.1    AJVK01015359    AJVK01015360    GDIP01189992    JAJ33410.1    GFDF01001492    JAV12592.1    AJ302047    AE014298    GDIP01047713    JAM56002.1    GFDF01001578    JAV12506.1    RVE53051.1    NWSH01000372    PCG76878.1    GFDF01001507    JAV12577.1    GDIQ01183331    JAK68394.1    GDIP01149807    JAJ73595.1    GDIP01223670    JAI99731.1    GDIP01161850    JAJ61552.1    GDIP01144206    JAJ79196.1    GDIP01087956    JAM15759.1    GBXI01000421    JAD13871.1    BT099899    ACX30061.1    ODYU01000952    SOQ36489.1    AJWK01014240    GL888602    EGI59184.1    AJWK01014233    GDIP01228135    JAI95266.1    GDIP01071911    JAM31804.1    CH379063    EDY72430.1    GDIQ01217631    JAK34094.1    GDIQ01069647    JAN25090.1    GL732598    EFX72552.1    GDIQ01114275    JAL37451.1    ODYU01008712    SOQ52539.1   
Pfam
PF00852   Glyco_transf_10        + More
PF17039   Glyco_tran_10_N
Interpro
IPR038577   GT10-like_sf        + More
IPR001503   Glyco_trans_10       
IPR031481   Glyco_tran_10_N       
Gene 3D

Ontologies

Topology

Subcellular location
  
Length:
116
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00703
Exp number, first 60 AAs:
0.00018
Total prob of N-in:
0.11832
outside
1  -  116
 
 

Population Genetic Test Statistics

Pi
0
Theta
0
Tajima's D
0
CLR
0
CSRT
0
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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