Silkworm Genome Informatics Database

Gene

KWMTBOMO16857

Pre Gene Modal

BGIBMGA010315

Annotation

PREDICTED:_uncharacterized_protein_LOC106126070_[Papilio_xuthus]

Location

Bomo_Scaf529(+):166-2141 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.53

CDS

ATGGGTCGGTGGATCTGTCCTCAGATGAGGAAGGCTTGCTGCCCCCAAGAAATTACCGACCACGAGGAGAGGTCGGCAGGCTTCGAGAGGAGTGAGTGCTTCACGGCCGCGGAGGAACGCACAGGGACGGCCTCTGACGAGGTTGCGAAGTTGCAGGAGGAAAACAGCCGTCTCCGAAATGATATGGAGGACCTCCGGCGACGAGTCACTGCGTTGAGCGAGCAGCAGCAGCGGCGTACGTCCACTGATGCCGCATCGGTAGTGACCCCGGCTCCCGCACCGAGACCGACAAGCACTCATACCGACGACGAGGTCGAGCGCATTGTCCGGCTCTGTATGCTCCAGTGCGGGAGCATGGTCAATGCTCGTATGGAGGCAATTTCTCGGCGCCTCCCTGCGGAAATCCTCCGTCCGCCACTAGCGGCCGATACACGGCGGAGGGCTGAGGAGCCGCCGAGACCTAAGCCTAGGGAGGGGAAGCCCGCGGAGGGTGTCAAAAAGCCCGTCGAGGGAGCCCCATCGAGCGATCAGCCCACGACTGCTGGGTCTAAGGGCGGCCTCAGCAGCAACGCATGCGCCCGGCCAAACCGCAAAGGCGGTTGCGCAGCCTGCGCGGCGGGCTGCCAAAGGCGGTCGCAAAGGACCGGAGATACGTGCTCCGCGTTCCGAAGCTGTGACGCTCACGCTACAGCCGGAGCTGCGGAGCGCGGCGTAACGTACCAGTCGGTCATCGCCGAAGCAAAGGCCAAGATCAAATTATCAGATCTTGGTCTTCAGGCCGTCACCCACAGGCAGGCTGCCACGGGTGCACGGTTGTTCGAGGTGGCTGGTACTACGAGTGGCAGTGCCGAAAAGGCGGACGCTCTGGCCGCCAAGATGAGGGAGGTCCTCAGCCCCGAGGACGTCCGGGTCTCCAGGCCAATGAAAACCGCAGAGGTGCGGATTGCTGGACTGGATGACTCCGTGACCTCTGAGGAGGTGGTAGCGGCCGTTGCCCGAAGTGGAGAGTGTCCATCGGACAAGGTGCGGGCCGGCGATATACGCACCGATGCCACCGGACTCGGCGTGGTCTGGGTTCGGTGCCCTGTAGCGTCGGCGAAAAAGATCGCCTTAAGCGGCAGATTGCTGGGAAGCCAGCGGGACACAGGCTGGGTGGAGGAGCCTGTGGCGCACCAGCAGCAAGGCCAAGAAGAAGAAGAGGAACTCAAAACCTGCCGGGGAAACCTCGCCACCCCCCGCAGGCTAGTAGCTCCGTAG

Protein

MGRWICPQMRKACCPQEITDHEERSAGFERSECFTAAEERTGTASDEVAKLQEENSRLRNDMEDLRRRVTALSEQQQRRTSTDAASVVTPAPAPRPTSTHTDDEVERIVRLCMLQCGSMVNARMEAISRRLPAEILRPPLAADTRRRAEEPPRPKPREGKPAEGVKKPVEGAPSSDQPTTAGSKGGLSSNACARPNRKGGCAACAAGCQRRSQRTGDTCSAFRSCDAHATAGAAERGVTYQSVIAEAKAKIKLSDLGLQAVTHRQAATGARLFEVAGTTSGSAEKADALAAKMREVLSPEDVRVSRPMKTAEVRIAGLDDSVTSEEVVAAVARSGECPSDKVRAGDIRTDATGLGVVWVRCPVASAKKIALSGRLLGSQRDTGWVEEPVAHQQQGQEEEEELKTCRGNLATPRRLVAP

Uniprot

A0A2H1VKL5 A0A2A4JDP3 Q8MY38 A0A0L7KWB9

Pubmed

12644555 26227816

EMBL

ODYU01003063 SOQ41363.1 NWSH01001765 PCG70205.1 AB078928 BAC06449.1 + More
JTDY01004969 KOB67533.1

Proteomes

UP000218220 UP000037510

Pfam

PF00098 zf-CCHC

Interpro

IPR036875 Znf_CCHC_sf + More
IPR001878 Znf_CCHC

SUPFAM

SSF57756 SSF57756

ProteinModelPortal

A0A2H1VKL5 A0A2A4JDP3 Q8MY38 A0A0L7KWB9

KEGG

101744178 K11843 ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] | (RefSeq) ubiquitin carboxyl-termina

GO

GO:0003676 GO:0008270

Length:

418

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00106

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01386

outside

1 - 418

Pi

0

Theta

0

Tajima's D

0

CLR

0

CSRT

0

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree