SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16849
Annotation
PREDICTED:_serine_protease_easter-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.757
 

Sequence

CDS
ATGTCCACAAATTCGCAGTCACATCAAAAGCTGATACCATTACCGAACTGGTCGATTGAAGATTGCCAAGCAATGTACAAGCAAACAAAGTTGCCCGATAAAATCATTTGTGCTGGTGGCGAAAGAGGAATGGACACGTGCCGCGGGGATTCCGGTGGGCCATTGGTGGTCATGAAGAGGAGATCTGAGTTGTGGGCATCACCAGCGCCGGCCACGTCCATTGCGGTTCACAAGGATATCCCGGGATTTATACGAATGTTACCATGTTCTTGGACTGGATCGGAGATGTAA
Protein
MSTNSQSHQKLIPLPNWSIEDCQAMYKQTKLPDKIICAGGERGMDTCRGDSGGPLVVMKRRSELWASPAPATSIAVHKDIPGFIRMLPCSWTGSEM

Summary

Similarity
Belongs to the peptidase S1 family.
Pfam
PF00089   Trypsin        + More
PF12032   CLIP
Interpro
IPR009003   Peptidase_S1_PA        + More
IPR001254   Trypsin_dom       
IPR033116   TRYPSIN_SER       
IPR001314   Peptidase_S1A       
IPR018114   TRYPSIN_HIS       
IPR022700   CLIP       
IPR038565   CLIP_sf       
SUPFAM
SSF50494   SSF50494       
Gene 3D
PDB
4BNR     E-value=5.72145e-06,     Score=112

Ontologies

Topology

Length:
96
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00781
Exp number, first 60 AAs:
0
Total prob of N-in:
0.59238
inside
1  -  96
 
 

Population Genetic Test Statistics

Pi
0
Theta
0
Tajima's D
0
CLR
0
CSRT
0
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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