SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16846
Annotation
unknown_unsecreted_protein_[Papilio_xuthus]
Location in the cell
Extracellular   Reliability : 1.907
 

Sequence

CDS
ATGTTCACATTACCATTTGTTGCATTTTTTGGTGTTCACTACTTACTCTCTGATTATTACCATTTGGAAACATTTGTGGTGACTGTGTGGTCTGTTGCCGCAGCAGTGTTAGTAGTCAACATAATAATAATAGCATACGCATATCAGGCTTATCATGAGAAAGAATATGATGAACATGGAAACGAGATTGATCAGCATTCATACACTCCCAGTCAAGTAGAGTCCGAAAAAGCTCCTTAA
Protein
MFTLPFVAFFGVHYLLSDYYHLETFVVTVWSVAAAVLVVNIIIIAYAYQAYHEKEYDEHGNEIDQHSYTPSQVESEKAP

Summary

Similarity
Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
Pfam
PF01189   Methyltr_RsmB-F        + More
PF09446   VMA21
Interpro
IPR029063   SAM-dependent_MTases        + More
IPR001678   MeTrfase_RsmB/NOP2       
IPR019013   Vma21       
IPR023267   RCMT       
SUPFAM
SSF53335   SSF53335       

Ontologies

Topology

Length:
79
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
23.34757
Exp number, first 60 AAs:
23.34757
Total prob of N-in:
0.04168
POSSIBLE N-term signal
sequence
outside
1  -  25
TMhelix
26  -  48
inside
49  -  79
 
 

Population Genetic Test Statistics

Pi
0
Theta
0
Tajima's D
0
CLR
0
CSRT
0
Interpretation
Uncertain
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