Gene

KWMTBOMO16824  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004585

Annotation

vitellogenin_precursor_[Bombyx_mori]

Location

Bomo_Scaf346(+):4396-7420      View in EpiBrowser

Full name

Vitellogenin      

Location in the cell

Extracellular   Reliability : 1.489 Nuclear   Reliability : 1.41

CDS

ATGGTGAAACTAGTTTCTGCTGGCATTAACAAAGCTAGAGTGAGAGTTGTGGATTTGAGTGCTAGCTTTGAGGGCAGTCAAGATCAGAATTACGTTTTCACTGGCACCTGGGGTGATAGTCCGGTCGATTCAAAGGTTCAAGGAATGTTATTTGCTGGCACAAACTATCGTTATGCTCATGCGCCTGATCATGTGGAATTCTCCGTCTCATTCCAAGACATGAGTCCTCAATACAGAAACTTCTCCTACCACACATACAGACTCTATGAGTACTTGGGTTACTGGTATACTGAAGCTAATCCTTTGAAACTAACTCAAAATGGTAAAATGGACTTCAAAATTGATTTCTCGTACTTCGATCGTACTTACACCGTCGATATTGCATCCCCATCTGGAGAGGCACGAATGAGGGACATGCCAATTGCAACAATGGCACCTGGTGCTTTGTCTTTCTACCAACCGCTAAAAGCTTATGAACTCGTTGCCAATTACTTCACTGGCCACCAATATCAACCCTACTGTTCTATCGATGGCACAAGGATACATACCTTCAGTAATCGCAGCTACGAATATCCCTATCTCGATCCTGGCACGAGGCAACAGAGAGATCAACAGGAGATCTATATTTCTTACAAGTCTGAGTCAGGACAGGATCTTGAGATCGAAATACAACCAGCGTCTGGAGACTCTGCATATCAAGTGAAAGTCACGACGAATACCAAGAAGATCACCGATGATGACCTCACCATAGGCATCTGTGGACGTATGAGCGGCGAGCAGCGCGACGACTATCTCACTCCAGAAGGTTTGGTCGACAAGCCTGAGCTATATGCCGCAGCCTACAGCCTAAATGAGGAGAACAGTGACCCCAAAACCCAGGAACTGAAGGCTCTAGCAACACAACAAGCTTACTACCCAGAATATAAGTACACAAGCATCCTACGCTCTGACCCAACTTGGCAAGAAGAATCACAGTCCTCGGTGAGGATCAATGGCAGTCTGAAACCGTCTATAAGTCTAGAAGCTACGACAAACACAAGGGCGCTTGTGAAGTTAGGCAACAGGTGCAGTTTTATGAGAACCACGGCGATATCTGTATCACAACTTCGAGAGTCCCCTCGTGTCAGTCGCATTGCCGTGCTGGAGACTACAAAATACAGCACGTTCAAGTGA

Protein

MVKLVSAGINKARVRVVDLSASFEGSQDQNYVFTGTWGDSPVDSKVQGMLFAGTNYRYAHAPDHVEFSVSFQDMSPQYRNFSYHTYRLYEYLGYWYTEANPLKLTQNGKMDFKIDFSYFDRTYTVDIASPSGEARMRDMPIATMAPGALSFYQPLKAYELVANYFTGHQYQPYCSIDGTRIHTFSNRSYEYPYLDPGTRQQRDQQEIYISYKSESGQDLEIEIQPASGDSAYQVKVTTNTKKITDDDLTIGICGRMSGEQRDDYLTPEGLVDKPELYAAAYSLNEENSDPKTQELKALATQQAYYPEYKYTSILRSDPTWQEESQSSVRINGSLKPSISLEATTNTRALVKLGNRCSFMRTTAISVSQLRESPRVSRIAVLETTKYSTFK

Subunit

Heterotetramer of two heavy and two light chains.

Keywords

Cleavage on pair of basic residues   Complete proteome   Direct protein sequencing   Glycoprotein   Phosphoprotein   Reference proteome   Secreted   Signal   Storage protein  

Feature

chain  Vitellogenin

Uniprot

H9J4Z5   Q27309   Q9BPP5   Q33CE5   Q9GUX5   Q9BPP7   + More
A2A0V4   Q59IU2   D3K369   A5A3J2   Q9BPP6   Q59IU3   A0A0N1ICG0   A0A0N1I5M7   A0A0L7LRX8   A0A385HVZ9   A0A0S2C3S6   R4KZ43   A0A2W1BQW6   S4T709   A0A1D5ARX5   A0A0S3G570   W0M288   A0A212ES36   A0A3S2PE51   B0FBK0   A0A059VBJ4   A0A125RTZ3   A0A2H1WVX0   A0A2A4JEQ8   G3LSH9   A7XS62   A0A2A4J2U3   A0A3G1S403   A0A2W1BMM7   A0A2W1BK92   A0A2A4IZG8   A0A2H1W8V4   A0A2A4J1L8   A0A2H1W9B6   A0A2A4JFI3   A8CMX8   A0A2W1BKE7   Q7JPH3   Q25265   Q25269   A0A2H1VRD1   A0A2W1BLH3   A0A2S1XV30   A0A1L2JIS2   A0A2Z6FL27  

Pubmed

19121390    8193154    26354079    26227816    28756777    23844078    + More
27535723    22118469    19482134    30279662    17785196    8742824    9327584    29718485   

EMBL

BABH01025711    D13160    D30733    AB055845    BAB32642.2    AB239763    + More
BAE47146.1    EF683091    AB049631    ABS19573.1    BAB16412.1    AB055843    BAB32640.1    AB247378    BAF45319.1    AB190810    BAD91196.1    GU361974    ADB94560.1    EF523567    ABP63663.1    AB055844    BAB32641.1    AB190809    BAD91195.1    KQ459890    KPJ19580.1    KQ458842    KPJ04900.1    JTDY01000218    KOB78233.1    MG799570    AXY55008.1    KT947112    ALN38805.1    JX504706    AGL08685.1    KZ150067    PZC74123.1    JQ723600    AFV40972.1    KT599434    AOH73254.1    KT274176    ALR35190.1    KF501044    AHG29547.1    AGBW02012867    OWR44310.1    RSAL01000078    RVE48729.1    EU290149    ABY56617.1    KJ540279    AHZ89334.1    KT724958    AMD78107.1    ODYU01011461    SOQ57205.1    NWSH01001771    PCG70188.1    JN408698    AEM75020.1    EU095334    ABU68426.1    NWSH01003613    PCG66056.1    MH553377    AXM43802.1    PZC74126.1    PZC74125.1    NWSH01004650    PCG64818.1    ODYU01007081    SOQ49535.1    PCG66057.1    SOQ49536.1    PCG70190.1    EF383143    ABQ23674.1    PZC74124.1    U24161    AAB40975.1    U90756    AAC02818.1    U60186    AAB03336.1    ODYU01003950    SOQ43336.1    PZC74127.1    MF622538    AWJ95280.1    KT892949    AOY34570.1    LC384838    BBE28981.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000037510    UP000007151    UP000283053    + More
UP000218220   

PRIDE

H9J4Z5    Q27309   

Pfam

PF01347   Vitellogenin_N        + More
PF09172   DUF1943
PF00094   VWD
PF00096   zf-C2H2

Interpro

IPR001747   Lipid_transpt_N        + More
IPR015255   Vitellinogen_open_b-sht       
IPR015816   Vitellinogen_b-sht_N       
IPR015819   Lipid_transp_b-sht_shell       
IPR001846   VWF_type-D       
IPR011030   Lipovitellin_superhlx_dom       
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       

SUPFAM

SSF48431   SSF48431        + More
SSF56968   SSF56968       
SSF57667   SSF57667       

Gene 3D

1.25.10.20     2.30.230.10    

ProteinModelPortal

H9J4Z5   Q27309   Q9BPP5   Q33CE5   Q9GUX5   Q9BPP7   + More
A2A0V4   Q59IU2   D3K369   A5A3J2   Q9BPP6   Q59IU3   A0A0N1ICG0   A0A0N1I5M7   A0A0L7LRX8   A0A385HVZ9   A0A0S2C3S6   R4KZ43   A0A2W1BQW6   S4T709   A0A1D5ARX5   A0A0S3G570   W0M288   A0A212ES36   A0A3S2PE51   B0FBK0   A0A059VBJ4   A0A125RTZ3   A0A2H1WVX0   A0A2A4JEQ8   G3LSH9   A7XS62   A0A2A4J2U3   A0A3G1S403   A0A2W1BMM7   A0A2W1BK92   A0A2A4IZG8   A0A2H1W8V4   A0A2A4J1L8   A0A2H1W9B6   A0A2A4JFI3   A8CMX8   A0A2W1BKE7   Q7JPH3   Q25265   Q25269   A0A2H1VRD1   A0A2W1BLH3   A0A2S1XV30   A0A1L2JIS2   A0A2Z6FL27  

KEGG

692741    no KO assigned | (RefSeq) VG; vitellogenin

GO

GO:0005319   GO:0005576   GO:0045735   GO:0003676  

Subcellular location

Secreted  

Length:

390

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00269

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00857

outside

1  -  390

 

 

Pi

0

Theta

0

Tajima's D

0

CLR

0.049826

CSRT

0

Interpretation

Uncertain