Silkworm Genome Informatics Database

Gene

KWMTBOMO16789

Pre Gene Modal

BGIBMGA004594

Annotation

unknown_unsecreted_protein?_partial_[Papilio_xuthus]

Location

Bomo_Scaf236(-):15282-16515 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.285

CDS

ATGGATACTATTTGCCGTTTGTGTTGTTCCGATAAATTCGTCAACAATTATATATTTGACGAAAAGAATGCATGGTACCTTAAAATGGCGTTATTACCCGTTAAGATTGACAAGAACGATCGGCTGCCCCAGAAGATTTGTGATCATTGCAGTCGTAAAGTTAACGAGTTTTATGAGTTTTGTAATGAAACTATTGTAGTGGAAAATAAGCTACAAGCTTTCTTAAAACAGCAAGGAACACACAACACAACTGTAGATCTCATACTTGGAAAACCGAAGACACCAATTCTACCTCCTAAAACATGTGAACAAAGCCATCGAATTGATGAAGGTATACCAGTAGATGAAGTTGTCAAAATTAAAGTTGAAACGCCAAAAGAAATAAAACAAGAAGATATTGAAGCAGAGGAGAACTATCACTACTCAGATGACAGTGATGATGTCTATTTAACAAATCTAAAAGCAAAGAAAAACGATATTGATGTAATAAGATTAAAAAACAGAGAGAAACAGGACGTAAAAAAGTAA

Protein

MDTICRLCCSDKFVNNYIFDEKNAWYLKMALLPVKIDKNDRLPQKICDHCSRKVNEFYEFCNETIVVENKLQAFLKQQGTHNTTVDLILGKPKTPILPPKTCEQSHRIDEGIPVDEVVKIKVETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKQDVKK

Uniprot

H9J504 A0A2W1BJD3 A0A212FK79 A0A2A4J790 S4NTU4 A0A2H1WWG4 + More
A0A0L7LQJ8 A0A0N1PH32 N6U555 A0A1S3DGF4 A0A2H1WUC3 A0A067RFU2 A0A1W7R5J4

Pubmed

19121390 28756777 22118469 23622113 26227816 26354079 + More
23537049 24845553

EMBL

BABH01025762 KZ150258 PZC71773.1 AGBW02008114 OWR54144.1 NWSH01002922 + More
PCG67292.1 GAIX01012086 JAA80474.1 ODYU01011531 SOQ57327.1 JTDY01000329 KOB77674.1 KQ460077 KPJ17861.1 APGK01039285 KB740969 ENN76730.1 ODYU01011124 SOQ56669.1 KK852530 KDR21918.1 GEHC01001233 JAV46412.1

Proteomes

UP000005204 UP000007151 UP000218220 UP000037510 UP000053240 UP000019118 + More
UP000079169 UP000027135

PRIDE

H9J504

Pfam

PF07776 zf-AD + More
PF00096 zf-C2H2

Interpro

IPR012934   Znf_AD        + More
IPR013087   Znf_C2H2_type
IPR036236   Znf_C2H2_sf

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

H9J504 A0A2W1BJD3 A0A212FK79 A0A2A4J790 S4NTU4 A0A2H1WWG4 + More
A0A0L7LQJ8 A0A0N1PH32 N6U555 A0A1S3DGF4 A0A2H1WUC3 A0A067RFU2 A0A1W7R5J4

KEGG

101744112 no KO assigned | (RefSeq) zinc finger protein 484-like

GO

GO:0005634 GO:0003676 GO:0008270 GO:0003700 GO:0016020 GO:0004888 GO:0007166 GO:0016773 GO:0006096 GO:0006281 GO:0006259

Length:

175

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00136

Exp number, first 60 AAs:

0.00136

Total prob of N-in:

0.34502

outside

1 - 175

Pi

0

Theta

0

Tajima's D

0

CLR

0

CSRT

0

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree