Silkworm Genome Informatics Database

Gene

KWMTBOMO16787

Annotation

PREDICTED:_uncharacterized_protein_LOC106135986_[Amyelois_transitella]

Location

Bomo_Scaf231(-):14470-17805 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.165 Nuclear Reliability : 1.453

CDS

ATGACTTCTTATAATTTTAATGATGACATCCAAAACCAACTCATGCGTTTTTGGCAGCTTGAAGAAGTCTGTCCTCAGTCAAATCATTATTTCCCTGAAGAGAAGTTATGCGAAGAACATTTTGTTAAAAATACAACTCGCCTCGCAGACGGACGGTTTTGCGTAAGAATCCCATTGAAACAAGCGCCTGACGTTTTGGGAAGTTCTTATCAGCGAGCTAAACATTGCTTATTATCTTTGGAGCGTCGACTCAAAGGTGATGATTCATTTAGTAAAATGTACAAGGAATTTATGCGCGAGTATAAAAATCTTGGTCACATGTCAGAGTGCAAACCGAATATTGAGTTGCCTCATTACTTCATCCCACATCATGGTGTCCTTCGTGAATGTAGTACGACCACTAAGTTGCGCGTCGTATTTAATGCGAGCAGCCCTACTTCCTCAAGGGTTTCATTTAATGACATTCAAATGATAGGACCCACGGTGCAAGACGATTCTTCTGTCAATTCTTTTACGTTTTCGGCAGCACAATCCACACATCATGTCACTAAGTTATTGTTTGAGTTTGAACACAGAAGATTAATGCATGCAGGCCCTCAACTCCTGTTAGCCACAATTAGAGAAAACTACTGGCCTATAGGCGGTCGTAATTTAGCGAAAAAATGTTACCGTCAGTGTGTGCGTTGCAATCGTATGAAAGGAAAGTCATTCGCTCCGTTAATGGGCAACTTACCGCAGCAGAGACTCGAACCTGGAGGTTACGCATTTGAAAGTGCAGCAGGCGTGGACTATGCCGGTCCCGTTTCCTGCGCTAGTCGTAATGGTCGCGGTTGTAGACTCATCAAGTCGTACATTGCTATTTTTGTGTGCTTCACTACTAAGGCAGTTCATTTAGAATTGGTGGGTAACTTAACAAGCAATAACTATCTATTAGCGTTACGGAGATTTATATCGCGTAGAGGAAAGCCTAGAGACATATTTTCAGACAACGGTACCTCATTCGTTGGCGCATATAATGACCTATCGAAATTTCTCAAAGCCAATTGTGATTCCTTGGCCGCTGATTCGGCACAGGATAACATCAATTTTCATTTTATTCCCGCGTACAGCCCTAATTTCGGAGGTCTTTGGGAGGCAGATAACCAGAGTTGCTGA

Protein

MTSYNFNDDIQNQLMRFWQLEEVCPQSNHYFPEEKLCEEHFVKNTTRLADGRFCVRIPLKQAPDVLGSSYQRAKHCLLSLERRLKGDDSFSKMYKEFMREYKNLGHMSECKPNIELPHYFIPHHGVLRECSTTTKLRVVFNASSPTSSRVSFNDIQMIGPTVQDDSSVNSFTFSAAQSTHHVTKLLFEFEHRRLMHAGPQLLLATIRENYWPIGGRNLAKKCYRQCVRCNRMKGKSFAPLMGNLPQQRLEPGGYAFESAAGVDYAGPVSCASRNGRGCRLIKSYIAIFVCFTTKAVHLELVGNLTSNNYLLALRRFISRRGKPRDIFSDNGTSFVGAYNDLSKFLKANCDSLAADSAQDNINFHFIPAYSPNFGGLWEADNQSC

Uniprot

A0A151WHC3 J9M578 X1WJH1 J9LZV0

EMBL

KQ983129 KYQ47217.1 ABLF02015603 ABLF02015613 ABLF02021176 ABLF02066403 + More
ABLF02011639 ABLF02011640 ABLF02015735

Proteomes

UP000075809 UP000007819

Pfam

PF17921   Integrase_H2C2        + More
PF00665   rve
PF05585   DUF1758
PF07679   I-set
PF18701   DUF5641
PF05380   Peptidase_A17
PF03564   DUF1759
PF14291   DUF4371

Interpro

IPR041588   Integrase_H2C2        + More
IPR036397   RNaseH_sf
IPR001584   Integrase_cat-core
IPR012337   RNaseH-like_sf
IPR036259   MFS_trans_sf
IPR020846   MFS_dom
IPR003598   Ig_sub2
IPR036179   Ig-like_dom_sf
IPR008042   Retrotrans_Pao
IPR040676   DUF5641
IPR013098   Ig_I-set
IPR008737   Peptidase_asp_put
IPR003599   Ig_sub
IPR007110   Ig-like_dom
IPR013783   Ig-like_fold
IPR005312   DUF1759
IPR025398   DUF4371
IPR006580   Znf_TTF

SUPFAM

SSF53098   SSF53098        + More
SSF103473   SSF103473
SSF48726   SSF48726

Gene 3D

3.30.420.10 2.60.40.10

CDD

cd06174 MFS

ProteinModelPortal

A0A151WHC3 J9M578 X1WJH1 J9LZV0

KEGG

NA

GO

GO:0015074 GO:0003676 GO:0016020 GO:0004888 GO:0007166 GO:0016773 GO:0006096 GO:0006281 GO:0006259

Length:

384

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.66703

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03082

outside

1 - 384

Pi

0

Theta

0

Tajima's D

0

CLR

0

CSRT

0

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree