Silkworm Genome Informatics Database

Gene

KWMTBOMO16779

Pre Gene Modal

BGIBMGA002877

Annotation

PREDICTED:_uncharacterized_protein_LOC105842347_[Bombyx_mori]

Location

Bomo_Scaf224(-):15293-16535 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.499 Nuclear Reliability : 1.99

CDS

ATGAATGGCGAAGAAGACATAGCATTCATAGACGTAGCCTCTAACTCGATGGCGAAATTGCCAGAAAAAGGTATCCTGAAGAAGCACGGGTACGGAGCTGTGGATGGGAAGGACAAATGGGGAGACGACTCGCAGTCGGAGCAGCTCGAGGCTGGCTCGCAGTCCGATGGGCAGGAACCGGCAGGGGCTGTTGCCGATATGGAATACAAGTTTAAGGATCTGAACGGCTATCACGAGAACATAATAGTGGCCTTGAAGACGGCCGCGGCGCAACGTGCGAGCGCTGCAGGAGGCTCCGGTGATCTTCGCTCCCTCCAGGACTACGAGTACAAGGAGCGGAGGGAACGAGCCCCCAGCGCAGAGAAGATCCACGACGCGGAACTGCGAAGACAGCGCCCCGACGACGAAGAGGACGACGCTCCACAGTGCGCCCCATCAGAATCAGGAACCTGGAGGACTTGA

Protein

MNGEEDIAFIDVASNSMAKLPEKGILKKHGYGAVDGKDKWGDDSQSEQLEAGSQSDGQEPAGAVADMEYKFKDLNGYHENIIVALKTAAAQRASAAGGSGDLRSLQDYEYKERRERAPSAEKIHDAELRRQRPDDEEDDAPQCAPSESGTWRT

Uniprot

H9J042 A0A0N0PAM9 A0A194Q4A9 A0A2H1X452 A0A212F2U7 A0A2A4JHG5 + More
A0A3S2LD53 A0A0L7LBZ6 A0A1Y1NBB8 A0A0C9QUZ7

Pubmed

19121390 26354079 22118469 26227816 28004739

EMBL

BABH01018921 KQ461186 KPJ07383.1 KQ459472 KPJ00184.1 ODYU01012880 + More
SOQ59404.1 AGBW02010673 OWR48068.1 NWSH01001468 PCG71158.1 RSAL01000215 RVE44128.1 JTDY01001848 KOB72726.1 GEZM01011448 JAV93516.1 GBYB01004467 JAG74234.1

Proteomes

UP000005204 UP000053240 UP000053268 UP000007151 UP000218220 UP000283053 + More
UP000037510

PRIDE

H9J042

Pfam

PF08516   ADAM_CR        + More
PF00200   Disintegrin
PF07974   EGF_2
PF01421   Reprolysin
PF01562   Pep_M12B_propep

Interpro

IPR006586   ADAM_Cys-rich        + More
IPR013111   EGF_extracell
IPR036436   Disintegrin_dom_sf
IPR000742   EGF-like_dom
IPR024079   MetalloPept_cat_dom_sf
IPR001590   Peptidase_M12B
IPR001762   Disintegrin_dom
IPR013032   EGF-like_CS
IPR034027   Reprolysin_adamalysin
IPR018358   Disintegrin_CS
IPR002870   Peptidase_M12B_N

SUPFAM

SSF57552 SSF57552

Gene 3D

3.40.390.10 4.10.70.10

CDD

cd04269 ZnMc_adamalysin_II_like

ProteinModelPortal

H9J042 A0A0N0PAM9 A0A194Q4A9 A0A2H1X452 A0A212F2U7 A0A2A4JHG5 + More
A0A3S2LD53 A0A0L7LBZ6 A0A1Y1NBB8 A0A0C9QUZ7

KEGG

105842347 no KO assigned | (RefSeq) uncharacterized LOC105842347

GO

GO:0016021 GO:0004222 GO:0007229

Length:

153

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00054

Exp number, first 60 AAs:

0

Total prob of N-in:

0.07330

outside

1 - 153

Pi

0

Theta

0

Tajima's D

0

CLR

0

CSRT

0

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree