SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16774
Annotation
Alpha-(1?3)-fucosyltransferase_C_[Papilio_xuthus]
Full name
Alpha-(1,3)-fucosyltransferase C      
Alternative Name
Galactoside 3-L-fucosyltransferase
Location in the cell
Nuclear   Reliability : 1.958
 

Sequence

CDS
ATGGAACCGGTCAGCGAAGATTTCAAAATACAGTTAAAGTCTAAGTCTAAGGCCGCAGCGTGGTTTGTGTCAAATTGTTACACAAGAAGCAAAAGGGAAGATTTCGCTAATGAACTTCAAGTTGAACTGAAAAAGCACAATTTAGAACTAGATATCTATGGCAGATGTGGAAACCTTAAATGTTCCCGGGATACAGAAGAGGCATGTGATGAAATGATCAGAGAAAATATTACTTTTACTTGTCGTTTAAACTCATTTGGTGAAGATTATGTCACAGAAAAATTATTACATGCCTTAGAATTCGACGCTGTTCCTGTAGTGTATGGCGGTGCTAACTACACCAGGTAA
Protein
MEPVSEDFKIQLKSKSKAAAWFVSNCYTRSKREDFANELQVELKKHNLELDIYGRCGNLKCSRDTEEACDEMIRENITFTCRLNSFGEDYVTEKLLHALEFDAVPVVYGGANYTR

Summary

Similarity
Belongs to the glycosyltransferase 10 family.
Keywords
Complete proteome   Glycoprotein   Glycosyltransferase   Golgi apparatus   Membrane   Reference proteome   Signal-anchor   Transferase   Transmembrane   Transmembrane helix  
Feature
chain  Alpha-(1,3)-fucosyltransferase C
EC Number
2.4.1.-
EMBL
KQ459603    KPI93062.1    KQ461137    KPJ08813.1    ODYU01003079    SOQ41387.1    + More
NWSH01002952    PCG67232.1    AGBW02008995    OWR51946.1    JTDY01006679    KOB65782.1    JTDY01012912    KOB52215.1    RSAL01000031    RVE51638.1    JTDY01009552    KOB63349.1    JTDY01010816    KOB57987.1    AGBW02010446    OWR48495.1    BABH01022215    PCG67231.1    ODYU01013118    SOQ59805.1    KQ461108    KPJ09317.1    KQ459594    KPI96064.1    KQ460627    KPJ13479.1    NWSH01003936    PCG65654.1    JTDY01005919    KOB66482.1    BABH01022242    RVE51643.1    JTDY01001718    KOB73086.1    RVE51640.1    ODYU01001860    SOQ38649.1    ODYU01010180    SOQ55129.1    OWR51947.1    RVE51644.1    AGBW02010417    OWR48543.1    RSAL01000016    RVE53056.1    ODYU01001405    SOQ37538.1    RSAL01000116    RVE46859.1    OWR48542.1    KQ459585    KPI98210.1    RSAL01000164    RVE45329.1    ODYU01003471    SOQ42305.1    KZ149916    PZC77942.1    AGBW02011221    OWR47017.1    NWSH01004327    PCG65224.1    JTDY01003799    KOB68987.1    JTDY01001793    KOB72859.1    KPJ13478.1    RVE51642.1    RVE51641.1    AGBW02010111    OWR49153.1    PCG67233.1    KPJ13477.1    CH940651    EDW65403.1    QCYY01000951    ROT81568.1    CH916370    EDW00427.1    CH933810    EDW07281.1    CH479194    EDW27021.1    CH954180    EDV47679.1    KZ150145    PZC72905.1    GDIQ01211408    JAK40317.1    BDGG01000008    GAV02281.1    GDIQ01100861    JAL50865.1    GDIQ01032531    JAN62206.1    GDIQ01137186    JAL14540.1    GDIP01189992    JAJ33410.1    GL732598    EFX72552.1    GDIP01047713    JAM56002.1    GDIP01187438    JAJ35964.1    GDIQ01183331    JAK68394.1    CH379063    EDY72430.1    GFDF01001491    JAV12593.1    GFDF01001577    JAV12507.1    GDIQ01233708    JAK18017.1    GDIP01161850    JAJ61552.1    GBXI01000421    JAD13871.1    GDIP01087956    JAM15759.1    GDIP01223670    JAI99731.1    GDIP01149807    JAJ73595.1    GDIP01144206    JAJ79196.1    NWSH01000372    PCG76878.1    GDIQ01217631    JAK34094.1    KOB65783.1    AJ302047    AE014298    OUUW01000003    SPP78615.1    GDIP01228135    JAI95266.1    GDIQ01069647    JAN25090.1    GDIP01071911    JAM31804.1    KQ971354    EFA05856.1    GDIQ01202653    JAK49072.1    GBBK01003739    JAC20743.1    GDIQ01163017    JAK88708.1    GDIQ01093775    JAL57951.1    CP012528    ALC50016.1    GDIQ01114275    JAL37451.1    GFDF01001492    JAV12592.1    GDIP01038939    JAM64776.1    GDIQ01012846    JAN81891.1    GFDF01001578    JAV12506.1    GFDF01001507    JAV12577.1   
Pfam
PF00852   Glyco_transf_10        + More
PF17039   Glyco_tran_10_N
Interpro
IPR038577   GT10-like_sf        + More
IPR001503   Glyco_trans_10       
IPR031481   Glyco_tran_10_N       
Gene 3D

Ontologies

Topology

Subcellular location
  
Length:
115
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00715
Exp number, first 60 AAs:
0.00018
Total prob of N-in:
0.11959
outside
1  -  115
 
 

Population Genetic Test Statistics

Pi
0
Theta
0
Tajima's D
0
CLR
0
CSRT
0
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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