SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16773
Annotation
Uncharacterized_protein_OBRU01_25584?_partial_[Operophtera_brumata]
Location in the cell
Cytoplasmic   Reliability : 1.811 Nuclear   Reliability : 1.846
 

Sequence

CDS
ATGCCTAATGGTACCTACCTAAACGGTCGAGATTTAGGCGCGAAAGAACTTGCAAGACAAATGATTGAGATTTACGAAGACAAGAAAAAGTATAAAAGATTTTTTAAGTGGCATAATCATTACTCTTATCACGACGTGTATGAATCTCCGGAAAGCGATAGCATTTGCAAGTTGTGCGCGATAATTAATAACAATACAGTATTTGATAAGGCAACTGTTTATGAAGATTTTAATTCATGAAAACAAGAAACGACAGAACCAAATGAGGCATCGAAATTAAAATACATACTTCAGTGGACTTCTCCACGGGGAGTACCATTTGCTTACATGGGAAAAGGACAGGAAGGTTTTATACAAAGAAAATGCCCACACACCAATTGTTTTGTGACCGCGGACCGCAATTTACTCGGTGATTATACAAAATTCGACGTGATAGCTTTCGCAGGACCTGACGTGGTACGCATGTCGGAAAGAGCTTTGCCTGAGAAGAGGTCACCGCATCAAAAATACGCATTCGCTACAATAGAATCCTCGGACAATTACCCAGTTTGCTCAAATCGATTTGACGGTTACTTTAATTGGACATGGACATTCCGACTGGATTCGGAAGTCCGATGGGGATATTTCAATGTCAAAGATAAAAACGAAAACGTTATTGGACCGAATAAAATAATGCACTGGATGAAAATTGAAGACATGGAACCGGTCAGCGAAGATTTCAAAATACAGTTAAAGTCTAAGTCTAAGGCCGCAGCGTGGTTTGTGTCAAATTGTTACACAAGAAGCAAAAGGGAAGATTTCGCTAATGAACTTCAAGTTGAACTGAAAAAGCACAATTTAGAACTAGATATCTATGGCAGATGTGGAAACCTTAAATGTTCCCGGGATACAGAAGAGGCATGTGATGAAATGATCAGAGAAAAATATTACTTTTACTTGTCGTTTGAAAACTCATTTGGTGAAGATTATGTCACAGAAAAATTATTACATGCCTTAGAATTCGACGCTGTTCCTGTAGTGTATGGCGGTGCTAACTACACCAGGTAA
Protein
MPNGTYLNGRDLGAKELARQMIEIYEDKKKYKRFFKWHNHYSYHDVYESPESDSICKLCAIINNNTVFDKATVYEDFNSXKQETTEPNEASKLKYILQWTSPRGVPFAYMGKGQEGFIQRKCPHTNCFVTADRNLLGDYTKFDVIAFAGPDVVRMSERALPEKRSPHQKYAFATIESSDNYPVCSNRFDGYFNWTWTFRLDSEVRWGYFNVKDKNENVIGPNKIMHWMKIEDMEPVSEDFKIQLKSKSKAAAWFVSNCYTRSKREDFANELQVELKKHNLELDIYGRCGNLKCSRDTEEACDEMIREKYYFYLSFENSFGEDYVTEKLLHALEFDAVPVVYGGANYTR

Summary

Similarity
Belongs to the glycosyltransferase 10 family.
EMBL
JTDY01010816    KOB57987.1    ODYU01003079    SOQ41387.1    NWSH01002952    PCG67232.1    + More
KQ459603    KPI93062.1    JTDY01006679    KOB65782.1    JTDY01012912    KOB52215.1    KQ461137    KPJ08813.1    JTDY01009552    KOB63349.1    RSAL01000031    RVE51638.1    RVE51642.1    KOB65783.1    RVE51643.1    RVE51644.1    ODYU01013118    SOQ59805.1    PCG67231.1    KQ459585    KPI98210.1    JTDY01005492    KOB66945.1    RSAL01000016    RVE53056.1    RSAL01000116    RVE46859.1    KQ460627    KPJ13477.1    JTDY01001793    KOB72859.1    ODYU01003471    SOQ42305.1    RSAL01000164    RVE45329.1    AGBW02011221    OWR47017.1    PCG67233.1    KQ459594    KPI96064.1    BABH01022242    KPJ13478.1    AGBW02010417    OWR48543.1    KZ149916    PZC77942.1    ODYU01001405    SOQ37538.1    NWSH01004327    PCG65224.1    JTDY01005919    KOB66482.1    JTDY01001718    KOB73086.1    NWSH01003936    PCG65653.1    BABH01022215    ODYU01001860    SOQ38649.1    KZ150145    PZC72905.1    NWSH01003715    PCG65893.1    AGBW02010111    OWR49153.1    PZC77933.1    JTDY01003799    KOB68987.1    AGBW02008491    OWR53234.1    ODYU01008712    SOQ52539.1    RVE53050.1    RVE53051.1    NWSH01000372    PCG76878.1    ODYU01000952    SOQ36485.1    RVE53053.1    NWSH01004476    PCG65061.1    RVE53052.1    PZC77936.1    ODYU01003968    SOQ43373.1    PZC77935.1    KQ414617    KOC68244.1    KQ761844    OAD56586.1    GL888602    EGI59184.1    GDIQ01093775    JAL57951.1    OUUW01000003    SPP78615.1    HACA01011490    CDW28851.1    GDIQ01217631    JAK34094.1    GDIP01038939    JAM64776.1    GDIP01002675    JAN01041.1    LRGB01000868    KZS15541.1    GDIQ01114275    JAL37451.1    GL732869    EFX64162.1    ATLV01026273    KE525409    KFB52971.1    GDIQ01012846    JAN81891.1    GDIQ01076840    JAN17897.1    KFB52972.1    CH379063    EDY72430.1    GDIQ01002877    JAN91860.1    APCN01001363    KQ971354    EFA05856.1    KQ981250    KYN44218.1    KQ458537    KPJ05835.1    ADTU01005498    ADTU01005499    ADTU01005500    GBYB01010645    JAG80412.1    KQ978379    KYM94539.1    CH916370    EDW00427.1    AJVK01015359    AJVK01015360    AXCM01001982    KQ978679    KYN29320.1    AAAB01008846    EAA06326.5   
Pfam
PF17039   Glyco_tran_10_N        + More
PF00852   Glyco_transf_10
Interpro
IPR031481   Glyco_tran_10_N        + More
IPR001503   Glyco_trans_10       
IPR038577   GT10-like_sf       
IPR029068   Glyas_Bleomycin-R_OHBP_Dase       
IPR037523   VOC       
SUPFAM
SSF54593   SSF54593       
Gene 3D

Ontologies

Topology

Subcellular location
  
Length:
348
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0028
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01824
outside
1  -  348
 
 

Population Genetic Test Statistics

Pi
7.372014
Theta
8.91065
Tajima's D
-0.50273
CLR
0
CSRT
0.247337633118344
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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