Silkworm Genome Informatics Database

Gene

KWMTBOMO16769

Annotation

PREDICTED:_uncharacterized_protein_LOC101735402_[Bombyx_mori]

Location

Bomo_Scaf198(-):14115-19565 View in EpiBrowser

Location in the cell

Extracellular Reliability : 2.231

CDS

ATGGCTTTAAGGATGTCTATGGATTTAAGATTACAATGCGACGTTGGCCGACCTCAGCCAACTGGGCTGGCGGCCAGAAAGCATGCGTACTTTCTCGAGTTGGCCAAATATTGGATCGTTTGGAGGTTCGCTCTTACTGTCTTTTTCAAACCTCTTCCTTTGCCTGTAAACGGGAAAGAGACACAAAACTCGGACGCTGCTAATGCGGTTGGCTCGAACACAAATTCGAACGTGGAGAGTGACTCGCTCGTGGACAGCGTCGGCTCGAGCCGGGATTGCTGGATTTGCTACGACAGTTCCCGGGCGGAGCCCCTCATCAGGCCGTGTCGCTGCACCGGCGACGTGTCCGCCGTGCATCATGACTGCCTGAGCAGGTGGCTCGTCGAGAGTGCCGCCTCGCCTGACGGCTTGAAGTGCAAAGTCTGCAACACTCCCTACATCGTCCAGGAGACCAATCGAGTGGAGTGGGAGCGCGGGTTCACGTGGTCGCACTGGGCGGGCACCGCGGCCGCCGTCACCGCGCTCACCGGTGCCGCGGCCGGCGCCTGGGCCCTCGCGCAGCTCTACCCCTCCTCCCTCGTGCGCGTGCTCGCCGCCGGCGCCGCGCTGCTCGTCTGCTACGTCGCGCTCAGATTCCTGGGCACGAACACGGTGTCGGCGTACCACCGGGCCCGCGTCTACGGCCTGAAGATCCTGACGGAGCCCTTCGCCGACGTCCAGGACTCGGAGCAGGGTCAGCTGTCGACCATCAGCAGGACGGTGACCGTCGAGATCGCGCCGAAGGACGTCCTCGACCAAGCGCTCAAGGGCGAAGCGAAATAG

Protein

MALRMSMDLRLQCDVGRPQPTGLAARKHAYFLELAKYWIVWRFALTVFFKPLPLPVNGKETQNSDAANAVGSNTNSNVESDSLVDSVGSSRDCWICYDSSRAEPLIRPCRCTGDVSAVHHDCLSRWLVESAASPDGLKCKVCNTPYIVQETNRVEWERGFTWSHWAGTAAAVTALTGAAAGAWALAQLYPSSLVRVLAAGAALLVCYVALRFLGTNTVSAYHRARVYGLKILTEPFADVQDSEQGQLSTISRTVTVEIAPKDVLDQALKGEAK

Uniprot

A0A2A4J7W1 A0A2W1BJ37 A0A194QQX4 A0A194QL88 A0A3S2NLL7 A0A232EQV4 + More
A0A1S4F7W4 Q17CM2 U5ENJ3 B4I2S1 B4Q8M2 Q9VQI2 A0A0N0BHI5 B3NA79 A0A0L0BMK7 E2BS63 A0A336LPE8 A0A336LTJ9

Pubmed

28756777 26354079 28648823 17510324 17994087 22936249 + More
10731132 12537568 12537572 12537573 12537574 16110336 17569856 17569867 26109357 26109356 18057021 26108605 20798317

EMBL

NWSH01002568 PCG67959.1 KZ150117 PZC73257.1 KQ461181 KPJ07749.1 + More
KQ459053 KPJ04206.1 RSAL01000042 RVE50782.1 NNAY01002716 OXU20712.1 CH477307 EAT44075.1 GANO01004053 JAB55818.1 CH480820 EDW54066.1 CM000361 CM002910 EDX03539.1 KMY87764.1 AE014134 BT006012 AAF51189.1 AAO74695.1 KQ435750 KOX76311.1 CH954177 EDV57542.1 KQS70014.1 KQS70015.1 JRES01001649 KNC21163.1 GL450151 EFN81455.1 UFQT01000101 SSX19994.1 SSX19993.1

Proteomes

UP000218220 UP000053240 UP000053268 UP000283053 UP000215335 UP000008820 + More
UP000001292 UP000000304 UP000000803 UP000053105 UP000008711 UP000037069 UP000008237

PRIDE

Q9VQI2

Pfam

PF12906   RINGv        + More
PF18720   EGF_Tenascin
PF06454   DUF1084
PF07974   EGF_2

Interpro

IPR013083   Znf_RING/FYVE/PHD        + More
IPR011016   Znf_RING-CH
IPR041161   EGF_Tenascin
IPR009457   DUF1084
IPR013111   EGF_extracell

Gene 3D

3.30.40.10

ProteinModelPortal

A0A2A4J7W1 A0A2W1BJ37 A0A194QQX4 A0A194QL88 A0A3S2NLL7 A0A232EQV4 + More
A0A1S4F7W4 Q17CM2 U5ENJ3 B4I2S1 B4Q8M2 Q9VQI2 A0A0N0BHI5 B3NA79 A0A0L0BMK7 E2BS63 A0A336LPE8 A0A336LTJ9

PDB

2D8S E-value=0.000170311, Score=105

KEGG

101742687 no KO assigned | (RefSeq) uncharacterized LOC101742687

GO

GO:0008270 GO:0016021 GO:0016874 GO:0046872 GO:0015074 GO:0020037 GO:0016020 GO:0004888 GO:0007166 GO:0016773 GO:0006096 GO:0006281 GO:0006259

Length:

273

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

45.08381

Exp number, first 60 AAs:

0.92358

Total prob of N-in:

0.91133

inside

1 - 160

TMhelix

161 - 183

outside

184 - 192

TMhelix

193 - 215

inside

216 - 273

Pi

0

Theta

0

Tajima's D

0

CLR

0

CSRT

0

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree