Gene

KWMTBOMO16764  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013806

Annotation

PREDICTED:_uncharacterized_protein_LOC105841662_[Bombyx_mori]

Location

Bomo_Scaf190(+):56-1317      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.104 Mitochondrial   Reliability : 1.794 Nuclear   Reliability : 1.107

CDS

ATGCACGCTCTCGTCAAGGATCTGGTCGGTGGTATTGCCGATGATGTCGTTGCAGCCAAAAACGAACTCACGGAGGTCGCAAAAGGATTGGCATGCCAATCAAATCCAGCCCCAGTCCCCAGATCGTACGCCAGCGTCGCAGCAGCCAAGCATGTCCACCGTCCTGCACTTCATTCAATGGCGGTCACCCTTGAAGGTAGTCAGGAGACTGCGGACGAGGTGCTCGCCAGGGTGAAAAGGGCGGTCGATGCCAGAGGCACTGGCCTTAAAATAAATAAGGTTCGAAAGGCCAAGAACCAAACGATTATACTGGGCTGTGACACTGAAGAGGAACGAAAGAAAGTCCAAGAAATAATAGAGAGTCGCGGGGATGGACTGCTAGTAGCGCCCATGAAGAACAAGAGCCCTCTCGTCGTCCTGAAGGATGTGTATGTGGATAGTGAGGATGACGATATAATTAAGGCGCTCCACACACAAAATAAGGACATATTTGTGGGTATACCTGAAGAGAACATGGAGATGGTTATCAAATTTAAAAAACGTACAAGGAATCCAAAAACAGCGCACATCGTTCTCCAGGTGAAGCCGAAAGTATGGCAGAGGATGACGGAAGCTGGAGCCCTCTATCTGGACCTTCAAAGGGTCAGAGTCGAGGACCAGTCTCCGCTCATCCAATGCACAAGGTGCCTCGCATTTGGACATGGTCGAAAATTTTGCACTGAGAGTGTGGACAGATGCAGTCACTGTGGAGGACCGCATCTGCGCGCGAGAAATGCGCAGACTTTATCGCAGGGACCGAACCGCAGTGCTGCAACTGCTCACACTCTGGGTTGCGGAAGGCCGACCATAACGCTTTTAGCGCGAATGCCCGGTACGAAAAAAGTGGGACTACTTGGCTCGCGCTAA

Protein

MHALVKDLVGGIADDVVAAKNELTEVAKGLACQSNPAPVPRSYASVAAAKHVHRPALHSMAVTLEGSQETADEVLARVKRAVDARGTGLKINKVRKAKNQTIILGCDTEEERKKVQEIIESRGDGLLVAPMKNKSPLVVLKDVYVDSEDDDIIKALHTQNKDIFVGIPEENMEMVIKFKKRTRNPKTAHIVLQVKPKVWQRMTEAGALYLDLQRVRVEDQSPLIQCTRCLAFGHGRKFCTESVDRCSHCGGPHLRARNAQTLSQGPNRSAATAHTLGCGRPTITLLARMPGTKKVGLLGSR

Uniprot

H9JG79   A0A194QQW8   Q9BLI5   A0A437B589   Q93138   A0A2H1WF63   + More
A0A0L7LBB4   H9JY50   A0A0A9VUJ5   A0A2P8XUI0   Q5NTZ1   Q7M3N5   V9H0F3   A0A132A2M4   A0A2P8ZKU7   A0A132AHA1   A0A0J7NQR3   D7EJX3   D6WYM0   A0A0J7K2Y6   A0A2P8Y8S6   A0A2W1BMW2   A0A0J7K1H4   D7GYA0   A0A3Q0JEH1   A0A0J7KSA7   A0A0J7K184   A0A0A9XB35   K7JMI9   A0A0K8S8S5   A0A2R7XAP7   K7JYZ7  

Pubmed

19121390    26354079    11319268    7623845    26227816    25401762    + More
29403074    15814816    2447482    26555130    18362917    19820115    28756777    20075255   

EMBL

BABH01002157    KQ461198    KPJ05926.1    AB046668    BAB21511.1    RSAL01000154    + More
RVE45667.1    D38414    BAA07466.1    ODYU01008279    SOQ51725.1    JTDY01001935    KOB72511.1    BABH01042097    BABH01042098    BABH01042099    GBHO01045706    JAF97897.1    PYGN01001327    PSN35652.1    AB182560    BAD82945.1    M19755    AAC13648.1    JXLN01010145    KPM05191.1    PYGN01000027    PSN57126.1    JXLN01014890    KPM10307.1    LBMM01002461    KMQ94800.1    DS497722    EFA12905.1    KQ971357    EFA08428.1    LBMM01015471    KMQ84793.1    PYGN01000801    PSN40666.1    KZ150016    PZC74965.1    LBMM01017574    KMQ84041.1    GG695334    EFA13330.1    LBMM01003740    KMQ93191.1    LBMM01017550    KMQ84054.1    GBHO01026738    GBHO01026737    JAG16866.1    JAG16867.1    AAZX01008070    GBRD01016677    JAG49150.1    KK859632    PTY27945.1    AAZX01016229   

Proteomes

UP000005204    UP000053240    UP000283053    UP000037510    UP000245037    UP000036403    + More
UP000007266    UP000079169    UP000002358   

PRIDE

H9JG79    Q9BLI5    Q93138    H9JY50    Q5NTZ1    Q7M3N5    + More
V9H0F3   

Pfam

PF14529   Exo_endo_phos_2        + More
PF00075   RNase_H
PF00078   RVT_1
PF02966   DIM1
PF01826   TIL
PF00098   zf-CCHC

Interpro

IPR036691   Endo/exonu/phosph_ase_sf        + More
IPR012337   RNaseH-like_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR000477   RT_dom       
IPR036397   RNaseH_sf       
IPR002156   RNaseH_domain       
IPR004123   Dim1       
IPR036249   Thioredoxin-like_sf       
IPR002919   TIL_dom       
IPR036084   Ser_inhib-like_sf       
IPR036875   Znf_CCHC_sf       
IPR001878   Znf_CCHC       
IPR013087   Znf_C2H2_type       

SUPFAM

SSF56219   SSF56219        + More
SSF53098   SSF53098       
SSF52833   SSF52833       
SSF57567   SSF57567       
SSF57756   SSF57756       

Gene 3D

3.30.420.10     3.60.10.10    

CDD

cd02954  DIM1

ProteinModelPortal

H9JG79   A0A194QQW8   Q9BLI5   A0A437B589   Q93138   A0A2H1WF63   + More
A0A0L7LBB4   H9JY50   A0A0A9VUJ5   A0A2P8XUI0   Q5NTZ1   Q7M3N5   V9H0F3   A0A132A2M4   A0A2P8ZKU7   A0A132AHA1   A0A0J7NQR3   D7EJX3   D6WYM0   A0A0J7K2Y6   A0A2P8Y8S6   A0A2W1BMW2   A0A0J7K1H4   D7GYA0   A0A3Q0JEH1   A0A0J7KSA7   A0A0J7K184   A0A0A9XB35   K7JMI9   A0A0K8S8S5   A0A2R7XAP7   K7JYZ7  

KEGG

105841662    no KO assigned | (RefSeq) uncharacterized LOC105841662

GO

GO:0004523   GO:0003676   GO:0008270  

PANTHER

PTHR12052  

Length:

301

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00102

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01231

outside

1  -  301

 

 

Pi

0

Theta

0

Tajima's D

0

CLR

0

CSRT

0

Interpretation

Uncertain