Silkworm Genome Informatics Database

Gene

KWMTBOMO16761

Pre Gene Modal

BGIBMGA005642

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_cytokine_receptor_[Bombyx_mori]

Location

Bomo_Scaf184(+):5356-9570 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.236

CDS

ATGAAATATGAAATCAGGATCTACATCAAATCTAAAGCTGCAGTGAAAGAAGAGTTTTGGTCAGACTTCACATATACCATGGTATATACACTTAGCGAGAGACCTAGAAGACCACCAGACACCGCAGTTGGAGCCTTTGATCAATCTTTATATCAAACAAATAGAATGATATACATTTATTGGAAACAACTTGAAGAATATGAAGAGGCAGGCCGAATGAACTTCATTGTTTTAAGTGCCAATAAAACAATGCAAGTCATAGAACTACCTAGAGAAAACAGGTATCAGTTTGCCATATCGGCTAATAATGGGACGAAAACTAGTGGCATGGTATGGGCTATCTGTGATATATCTAAAGATGCAATTCCAATGTATGGTTTTCCGGTCAAAATGGACCATGGTATTCCAGGGAAAACTTTTGTAAAGATTAAATGGGCAATGACTTGTACACTTCAAGAAGGAATCATTACAGGATATTTGATCGCATATTGTCCTGCTCTAGATACCACTAATGTTTGTGCAACAAAAAATAAAACTAACTTATACATATCTAATCCTAAGCAAATGGAGATCAACATTACAAATCTTGAACCATACACTACATATATATTTACACTGGCATTGAACACCACTTATGGATTTAAAACAGTAGAAAATGCTTTCACGAGTATGACTACAACTGAAGATACTCCAACTAGTCCAGTTAATATTAATATAACCGATGTGCTTAGTGATTCATTGACGATTTCATGGGACCCACCTATTCATAAAAACGGAGTTATTGGAAAATATGTCATAAATAACTATGGTCAAGAAGTTTATGTAGAAAAAGTTTCAGATAAAGATGAAGATTCAAAAAGAAGGCATATTCGTTTGACTGGCTTACAGGGGTTTACTAATTATTCATTGAGTGTACAAGCATGTAGTACAGCTATAAGCAGTTGTTCGGTTTTGAATCCACATGATGCCCTTTTTGTCAGGACGAGAATAGGTCCTCCTAGTAAAATGAGGGCTCCAACTGTTAAAAATAATCCAGATTTTATTAAGTGGGTTCCACCAATAATACCAGGGGGGACGATTGACCTTTACCAAATTAAAAGGATTAAAGATGAGAGTGAAGCTGAAATAATAAATACTACAAACCTTTCATTTTCATTGATACATTGTGAAGGTGGAGTTGCCGGACAAACTTACCAAGTTAGAGCTGTTAATTTTGATGAAGATCCTTACCACGGTGCTTTAACTGACAATAAGGATGTATACCTACATAATGCTAACTATAAAGGTATACTAGAATATCCTGGAGAATGGAGTGAGCCAAGTTTTGTAAATTGTACAAGCAAAGAACATGTGACACTAACTCTTATTTTAATGGGAATATTTATGATAATTGGTATTATGTATGGTTTTATTAAATGTTACAAGAAATACCGAAAAATGGAAGATATTAAACCAGTTTTACCAAGTGGACTAGGAGTCCCCGAAAAGGATATTTCGAAATATGCTATTGGTGGTTGGAATCCTACAAACAAGGATGAGAAACCATCTTCAGACGAAATGTTGCTATTACCAAATAGTAGAACCACTGTATCTTCAGAATTGAAACAGAAAGAAAACAATAACAGTGCTTCTAGTGATCACACTGATAGTACAGCTTTATCAGATACATCACATGGGCCTGTAGAAAGACAAATCTCCTCATCTGATGATGGATCTAATTCATCACTACATCTTGAAGTAGAACCTACGAGAACAGCTGACAGTAACATCGATGGCGAATCATGCAATTCCGAAACTGAAACATCACAAATACCGTCACCATTCTTTAATGATAATACTTTCAAGAAAAATCCATGTGGCTATGTGCAACAATCTGTAGTGAGTCCTAATACAGGATATGTTCAAAGTGTTCAAGCAGGCGTTACAAACCCACCACAACCCTCATCACTCAGTGCCAGCTCTAGTTATGTAATGGCAGCTCTGTCTCCACCTATATTTACGACACGTGTTGCTCAACCTTGCGTAACGAGTTCACAATCAGCAGGAGGCTATGTGCACCCTGAAGGTGCTCAAACTATATCAGCAATGAATTTCCCGAAATTGGGGCAGACAACGAACAAACTGTTTGGTCCTGAAAGCTTGCCAACAATGCAAACCTTGCCACCAGCGAAACACACTGCAGACAGCAGCTACATTCAACTGCAATCTCTAGATTCCTTGCCCAGACACAAACATCCTGCCCGAAGTACAGTGCCATTAAAGACGCCAGCGTCTACCGGCTACGTCCGCCAAGGTGATCATAGGAAGCTTTATAGCGACTTGAGCACTGAAGAAGCCATCCTTCAGATTGCTGACACTATTGATAATCTCAATGGGATAGTGGAAGACGTGTTCTCTCGCTTAACGCGGCGAATCAAGCAGAATGTAGATAAAACCGCAAAATTGAATGAACGCATCGAAAACTCTAGGCTTAAAGTTGAAAAACTGACTGGAATGCAGAGAGCCATCAAAGTAATACAGGAGAAGCTACACTTCTATCATGTTAAAGTTGCGGAACCTAATTCACTCAAGCCCGATGAAGATTTTAGTTTGAACGCTGTTATTGATAACCTGGAAACCATCGGTGAACTTTTAGTATTTAACACCGATGAAAGCCCTTACTTCGGTGTTACCTCTAAAACACCAACCTACAAACCGGTCATCAAGAAATCGAATATTGAAAATAAGAGTCTAATAGAAGCGGCACCTTCGTCTATAATGAAGAAAGACGTCTTGAAGCGCGAAGTAGACGAATACATGTACGCACCTGGGATGGGAATGGTACCCGAAATGGAGATGCCGTTGGATTTACCGCATCTTCCAGGAATCGCTGAGGACATACAATATACTATCGCGACTGAAGGGTCTATAGCCCCGTCTGTCGTGACGTCACCGGTCACCGCCGATCATCGCCATTCCTGA

Protein

MKYEIRIYIKSKAAVKEEFWSDFTYTMVYTLSERPRRPPDTAVGAFDQSLYQTNRMIYIYWKQLEEYEEAGRMNFIVLSANKTMQVIELPRENRYQFAISANNGTKTSGMVWAICDISKDAIPMYGFPVKMDHGIPGKTFVKIKWAMTCTLQEGIITGYLIAYCPALDTTNVCATKNKTNLYISNPKQMEINITNLEPYTTYIFTLALNTTYGFKTVENAFTSMTTTEDTPTSPVNINITDVLSDSLTISWDPPIHKNGVIGKYVINNYGQEVYVEKVSDKDEDSKRRHIRLTGLQGFTNYSLSVQACSTAISSCSVLNPHDALFVRTRIGPPSKMRAPTVKNNPDFIKWVPPIIPGGTIDLYQIKRIKDESEAEIINTTNLSFSLIHCEGGVAGQTYQVRAVNFDEDPYHGALTDNKDVYLHNANYKGILEYPGEWSEPSFVNCTSKEHVTLTLILMGIFMIIGIMYGFIKCYKKYRKMEDIKPVLPSGLGVPEKDISKYAIGGWNPTNKDEKPSSDEMLLLPNSRTTVSSELKQKENNNSASSDHTDSTALSDTSHGPVERQISSSDDGSNSSLHLEVEPTRTADSNIDGESCNSETETSQIPSPFFNDNTFKKNPCGYVQQSVVSPNTGYVQSVQAGVTNPPQPSSLSASSSYVMAALSPPIFTTRVAQPCVTSSQSAGGYVHPEGAQTISAMNFPKLGQTTNKLFGPESLPTMQTLPPAKHTADSSYIQLQSLDSLPRHKHPARSTVPLKTPASTGYVRQGDHRKLYSDLSTEEAILQIADTIDNLNGIVEDVFSRLTRRIKQNVDKTAKLNERIENSRLKVEKLTGMQRAIKVIQEKLHFYHVKVAEPNSLKPDEDFSLNAVIDNLETIGELLVFNTDESPYFGVTSKTPTYKPVIKKSNIENKSLIEAAPSSIMKKDVLKREVDEYMYAPGMGMVPEMEMPLDLPHLPGIAEDIQYTIATEGSIAPSVVTSPVTADHRHS

Uniprot

H9J800 A0A2A4JEY4 A0A2H1W425 A0A194QS06 A0A194QCC0 D0AB85 + More
A0A212EP81 A0A1E1WQB5 A0A336MPR6

Pubmed

19121390 26354079 22118469

EMBL

BABH01020206 NWSH01001832 PCG69962.1 ODYU01006205 SOQ47849.1 KQ461155 + More
KPJ08303.1 KQ459232 KPJ02630.1 FP102340 CBH09280.1 AGBW02013517 OWR43293.1 GDQN01001839 JAT89215.1 UFQS01002012 UFQT01002012 SSX12960.1 SSX32402.1

Proteomes

UP000005204 UP000218220 UP000053240 UP000053268 UP000007151

PRIDE

H9J800

Pfam

PF00041 fn3

Interpro

IPR036116   FN3_sf        + More
IPR003961   FN3_dom
IPR013783   Ig-like_fold

SUPFAM

SSF49265 SSF49265

Gene 3D

2.60.40.10

CDD

cd00063 FN3

ProteinModelPortal

H9J800 A0A2A4JEY4 A0A2H1W425 A0A194QS06 A0A194QCC0 D0AB85 + More
A0A212EP81 A0A1E1WQB5 A0A336MPR6

PDB

6IAA E-value=0.00850776, Score=96

KEGG

101742044 K19599 cytokine receptor domeless | (RefSeq) cytokine receptor

GO

GO:0016021 GO:0005515 GO:0006508 GO:0020037 GO:0016020 GO:0004888 GO:0007166 GO:0016773 GO:0006096 GO:0006281 GO:0006259

Length:

986

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

21.51931

Exp number, first 60 AAs:

0.00057

Total prob of N-in:

0.55321

inside

1 - 450

TMhelix

451 - 470

outside

471 - 986

Pi

0

Theta

0

Tajima's D

0

CLR

0

CSRT

0

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree