Silkworm Genome Informatics Database

Gene

KWMTBOMO16753

Pre Gene Modal

BGIBMGA014553

Annotation

hypothetical_protein_TcasGA2_TC034914?_partial_[Tribolium_castaneum]

Location

Bomo_Scaf169(-):5788-11075 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.438

CDS

ATGAGAGGTACCGGGGAAATCAAATACCCGGCGCGGACCAAAACTGGCCTGAGTGTGACTACTCAGGGAAGAGAAATGGAAGAGGAAGAACAGCCAGTTATCACCGCGTACTCCGGTGATAACGACTACAGTGATCAAGGAAGTATAGGAGAGAGCTTTGAGGTTTCCAGTGTGACGATACTGGAGAAAGACTGGGAACAGGTGGAAGACCCGTTTAAAAGAAGGGAGTCAATCAAACGGACGCCCCCAGGGGCATTAAAAGAACTTAAGACACCCAGTAAAATGGCGGATAGCGGCACGCTAGTACAGGAAGATGTCTTTTTAACTCCTAAAGAAAAGATAGCTGAAGTAGCGGAAAATACACCAATGAGGCCAAAAAAGCGGAAAAAACTGTCCAGTCCGATAGTGATCCAACCCGTTGAAGCAGAGCCACCAGTGGAGTACCTGAAACTAAAAACTAAAATAGATAAGTTGGTAAAGTTCGGGAAAGAAAATAAAAATGTGCATCGGCAAATTAAGGACTTACTGATTGACCTCCCAGGACTGATGGAGCGGGTAACTATAAGATACAAGGACGATACAAATAAACCAACCGAAATGGAGCAAAAGTTTGAAGCCTACAAAAAGGAGCAAGAAGAAAAGATCAGGAGACTAGAACAGGAAATTAAGGAACTTAAGACACTGCATAAACGAGAGACTGGAGAGAACCAACTTTTCAAGCTTGACGATCAGATGATTAACAGCTATGACGACTTCTCGAAAGTTTCAAGCATGGACTGGACGCAGGATAGTTACAAAAGGACAAAGATAGGCCATGGAGACATCTTTCTGAGAACCACCGACTGTACAGTCTACTTCTGTGATGAGAGGGAGAAAGCACACTCGAGGCTGACAAGAAGGGTGCTAAGCCGATATCCAGAAGTGACTAAGAGCGAGAAGATGGCATGCGCAGGAGGAGCATACGTGACGGTGGAACGAGAAACCACCATCAAAACAAAAGAGGGGAGACAGACAGACAAAACGAGTGCTGTGATCATGTTCCATGATGCGACCAAACAGGACGGCCGAAGTCAAAAGGACATGTATGAGCTCCTGTCCGAATTAACCAAAATAGTGGAAGAGATGGGAAACAAAGAGCTGACTATTATAAAGCCCCAAGGAATCGATACAGGTGTAATAAGAAAGATGTTAGAAGTACTGTTCCGTGGAAAGGACATCGAATTAGAATTAAGGACACCTAAAAAAGGAGAAAACACAAACAATACGGAAACAAGAAACGGGACGAGGCTAAAAGAAGGAATAAAAGGGACCGCATCCCTAGAAAACATAAAAGGTGTAAAAAAGACAGCCAAGGGACAAGTACTGGTAAGAGTGATGGGAAATATTGAGGAGATGACTGGAAAAATAAGAGAAATGATGCGAGATAGAAAGGTAAGAAGAACTGGGGGGAGCAAGAAAAAAGTATTACACATAAAAGGAATGGACAGCTCGGTGGAAATGGAGGAAGTAAGGGAGGACTTAAAGTCGACAAACTTGATAAAAAAAGTGGACAGCTTGGAGATAAGATCACTGAGACCGATGGGCGGTGGAAACCAGACGGCAACGGTGATCCTGGATGAAGAGGATGCAGGAAGGTTGCTTGCGGGTGGTAAGGTAAGAGTAGGGCTCAATATATGCCACATATATGAAAGAATAGAACTGCTGAGATGTTACCGGTGCTGGAAATATGGCCACAAAGCGGATAACTGCGACGGCGAGGATAGGAGTAGGGCATGTAGGAGGTGTTCGGAAGCGGGCCATATGGCCGGAGATTGCGTAAATGAGCAATTCTGTCCCCTGTGTAATAAAAAAGGACACACAGCTGGCACCATGTTACAGATAAATATAGACCGAGGGAAAGCCGCGCACGACCTACTTCTGGCAACTGCGAGCAGTATGAGCGCGGATCTAGTGATGCTATCTGAACCCAATAGAAAATTGGCAAAAGCTGCTGGATGGGAGTGTGACACCAGGGGAGATGCAGCCCTAGTTCTTCTTAATAAAACACTGACGGTTTCTGAAATTTATAGGGGGAAGGGATTCGTTGGGTTCAAGATGAAGCACTTTGCCGCGTTCAGCTGTTACATCTCTCCCAACTGCAGTTTTGAGGAGTTCAAAGCAGACGTCGATGAGCTTTGGACACTACTAAAAAAACAAAAGACACCGATCCTAGTGGCAGGAGATTTTAACTCTGCATCGAGAGCGTGGGGCAGTAAAGCAACCAACAAAAGGGGCCACTACCTGTTGGAAATGGTGGCGGACCTTGACATTGTCATCATGAATGAAGGCGTGACCCCAACTTTTGAAAGAGGAGACAGAACATCTAGGCCCGACATCACCATGGCCTCTGAAACGCTGGCAGGCAAGATTAGTAATTGGCAAGTGCGCGACGAGGAGACAATGAGCGGACATAAATATATAGCCTACGAGATAAAGCATGTATTGCCTCTATCCCAGTGCCATGCACAGATGAAAAGGTGGAACCTCCAAAGGCTGGACGTAGATAAGTTCAGTAAAAGCCTGAAAGGAGCGCAGATCTCGACTCCCATGGAACTGGTGCAGGCTACGACGGCAGCGTGTGATGCTTCTATGCCAAAGCAAAACAACCGCAAGAAAAAAGGAGTCTACTGGTGGAACAAGGAAATTGCGGAAGCAAGGAAGGAGTGTTTGAAATGCCGAAGGAGGTACACAAGGAATAACAAAAAGCTAGGAAAAGGGAAAGACAGGGAAAATAACGAAGAAAATGAACACAAAAAGCAGTATAAGGAAGCGAAACTGGAGCTACAAAGACGAATATGGAAAGCGAAAGACGATAAATGGAGGGAAGTGTGCGAGGAAGTCGACAATGATATATGGGGACTGGGATACAAAATAGTGTCAAAAAAGCTACGCGGAAACTCACCGATAAATATGGGCATGGCACAAATTCAAAGCATAGCTGATGGCCTCTTCCCGGAACACATAGATTTCGAACGGAAAACGAAACCGTCACAGGAGTTCCCAGAGGTGACCGAGGAGGAGATCATCCAACTAAAAGCTCGCATAAAGCTCAGGAAAGCCCCAGGGCCCGACCGGATTCCGCCGGAGATAGTGACTCTAGCAGTAGCAGTAATTCCAGACAGGATAAGGCTTGTGTTGCAGAAGGTGCTGGAGTCTGGCGTCTTCCCCAACAGCTGGAAAACAGCCAGACTAGTCCTGCTAAGAAAACCAGGCAAACCCGCTGAAGATCCTGCGGGGCACAGGCCGCTATGTCTACTGGACTGCTACGGAAAGCTGCTGGAGTCGCTGATCCTAGGCAGAATAGAAAAACAACTAGTACAATCGGACTGTTTACAAGATTCGCAGTACGGGTTCAGAAAGGGGAGGTCCACAGTGGATGCAGCCAACAAGCTACTTGAGATAGCGGAAGACGCGAGACGAGGAACCCACCGCACCAGAAGAATCTGCGCAGTAGTGGCCCTCGACGTCCGTAATGCTTTCAATTCTGCATCGTGGGAGCTCATCCTGGAGGAAATGGCTGCAATAGGTATGCCTCAATACATCTATAATATCATAAACAGCTACCTCCAGGACAGATGCATCATACTGACAGACGCTGAGGGAGGGGTCGTAGTGAAAAAGGTTACCGGCTTCGCGGACGATTTAGCTCTGGTGGTGTCAGCAAAGAAGGAAGCAGAACTAATGGCAATAACGAATGTAGCCCTACAAAAGATCAGCGCTTGGATGAAGCAAAAGCGGCTACACTTGGCCCCAGAAAAGACCGAGGCAATTGTGCTAAGTGGGCGAAGAAAGCTTAGCGAGATTTGCTTTACCCTCCAGGGCGTCAGGGTGGTTCCAACCGACAAACTGAAATACCTCGGGTTTTGGTTTGACAAAAGTCTGAAGTTCGGCAAACACATTGAAGAAACAACTGGTAAAGCCGAAAGACTGACGACCGCCCTTGGCCAAATCATGCCCAGGAAAGGAGGGCCGAGGTCGAGCAAGCGCAGACTATTGGCGTCCGCAATACAATCTGTGATGTTATATGGAGCACCGGTGTGGGCAAAGGTAATGAATGTAGCGAAGTACAGGAACATGTATAGCAAAGTGCAACGACAGCTGGCAATACGCATCTGTGGAGCTTACCGTACCATATCGCTAGACGCCGTCTTGGTGATAGCGGGCCTGATACCGATAGAACGGCTAGCAAAGGAACGGCAACGCTACTACCACGAGGGGACAAGAACGAGAGAAGAGGAAAGAGCACATACAATAAAAGAATGGGAACGAGACTGGCAGAAGGAGGGAAAAGGTAAGTGGACTCGTACAATCATACCCAACCTTAGGCTCTGGATGGAACGGAAACATGGCGAAACCGACAGACTGCTGACACAGGCCCTAAGTGGGCATGGAGTTTTCAACACTTACCTGCATTCAATAGGGAAAGCAGAAAGCGCAAGTTGCCCATACTGCGAACATGTTGATACACCGGAACATGCCCTATTTCAATGCATAAAGTTCACAGAACTAAGAGGGAAAACGGAGGGAAGTGACGGAAAGGTGACTGTGGAAAACCTGATGGTGAGAATGATCCATAGTAAAGAAGAATGGGATAAATATGCGGGAATGCTCAAAGAGATAATGAGAGTGCGGGAAAAGGACGAAAGACTAAGGCAAGAATCTATCTATAATAATATATAA

Protein

MRGTGEIKYPARTKTGLSVTTQGREMEEEEQPVITAYSGDNDYSDQGSIGESFEVSSVTILEKDWEQVEDPFKRRESIKRTPPGALKELKTPSKMADSGTLVQEDVFLTPKEKIAEVAENTPMRPKKRKKLSSPIVIQPVEAEPPVEYLKLKTKIDKLVKFGKENKNVHRQIKDLLIDLPGLMERVTIRYKDDTNKPTEMEQKFEAYKKEQEEKIRRLEQEIKELKTLHKRETGENQLFKLDDQMINSYDDFSKVSSMDWTQDSYKRTKIGHGDIFLRTTDCTVYFCDEREKAHSRLTRRVLSRYPEVTKSEKMACAGGAYVTVERETTIKTKEGRQTDKTSAVIMFHDATKQDGRSQKDMYELLSELTKIVEEMGNKELTIIKPQGIDTGVIRKMLEVLFRGKDIELELRTPKKGENTNNTETRNGTRLKEGIKGTASLENIKGVKKTAKGQVLVRVMGNIEEMTGKIREMMRDRKVRRTGGSKKKVLHIKGMDSSVEMEEVREDLKSTNLIKKVDSLEIRSLRPMGGGNQTATVILDEEDAGRLLAGGKVRVGLNICHIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCPLCNKKGHTAGTMLQINIDRGKAAHDLLLATASSMSADLVMLSEPNRKLAKAAGWECDTRGDAALVLLNKTLTVSEIYRGKGFVGFKMKHFAAFSCYISPNCSFEEFKADVDELWTLLKKQKTPILVAGDFNSASRAWGSKATNKRGHYLLEMVADLDIVIMNEGVTPTFERGDRTSRPDITMASETLAGKISNWQVRDEETMSGHKYIAYEIKHVLPLSQCHAQMKRWNLQRLDVDKFSKSLKGAQISTPMELVQATTAACDASMPKQNNRKKKGVYWWNKEIAEARKECLKCRRRYTRNNKKLGKGKDRENNEENEHKKQYKEAKLELQRRIWKAKDDKWREVCEEVDNDIWGLGYKIVSKKLRGNSPINMGMAQIQSIADGLFPEHIDFERKTKPSQEFPEVTEEEIIQLKARIKLRKAPGPDRIPPEIVTLAVAVIPDRIRLVLQKVLESGVFPNSWKTARLVLLRKPGKPAEDPAGHRPLCLLDCYGKLLESLILGRIEKQLVQSDCLQDSQYGFRKGRSTVDAANKLLEIAEDARRGTHRTRRICAVVALDVRNAFNSASWELILEEMAAIGMPQYIYNIINSYLQDRCIILTDAEGGVVVKKVTGFADDLALVVSAKKEAELMAITNVALQKISAWMKQKRLHLAPEKTEAIVLSGRRKLSEICFTLQGVRVVPTDKLKYLGFWFDKSLKFGKHIEETTGKAERLTTALGQIMPRKGGPRSSKRRLLASAIQSVMLYGAPVWAKVMNVAKYRNMYSKVQRQLAIRICGAYRTISLDAVLVIAGLIPIERLAKERQRYYHEGTRTREEERAHTIKEWERDWQKEGKGKWTRTIIPNLRLWMERKHGETDRLLTQALSGHGVFNTYLHSIGKAESASCPYCEHVDTPEHALFQCIKFTELRGKTEGSDGKVTVENLMVRMIHSKEEWDKYAGMLKEIMRVREKDERLRQESIYNNI

Uniprot

A0A139WAH4 A0A139WN93 A0A139WNC9 J9KJG8 J9K6F0 A0A139W940 + More
A0A139W9A6 A0A139W9B3 A0A139W939 X1WZ64 J9KM84 J9JWJ3 A0A139W942 J9KNS1 J9JY94 J9LA43 J9KWM9 X1WXT5 X1WT13

Pubmed

18362917 19820115

EMBL

KQ971388 KYB24913.1 KQ971310 KYB29499.1 KYB29500.1 ABLF02041886 + More
ABLF02012448 ABLF02012450 ABLF02012455 ABLF02012460 KQ972691 KXZ75806.1 KQ972544 KXZ75870.1 KXZ75869.1 KXZ75807.1 ABLF02011183 ABLF02041884 ABLF02018942 ABLF02041885 ABLF02013358 ABLF02013361 ABLF02054869 KXZ75805.1 ABLF02018808 ABLF02007989 ABLF02018098 ABLF02011927 ABLF02004854 ABLF02041317 ABLF02014378

Proteomes

UP000007266 UP000007819

Pfam

PF00078   RVT_1        + More
PF14529   Exo_endo_phos_2
PF00098   zf-CCHC

Interpro

IPR000477   RT_dom        + More
IPR001878   Znf_CCHC
IPR036875   Znf_CCHC_sf
IPR036691   Endo/exonu/phosph_ase_sf
IPR005135   Endo/exonuclease/phosphatase
IPR000663   Natr_peptide

SUPFAM

SSF57756 SSF57756 + More
SSF56219 SSF56219

Gene 3D

3.60.10.10

ProteinModelPortal

A0A139WAH4 A0A139WN93 A0A139WNC9 J9KJG8 J9K6F0 A0A139W940 + More
A0A139W9A6 A0A139W9B3 A0A139W939 X1WZ64 J9KM84 J9JWJ3 A0A139W942 J9KNS1 J9JY94 J9LA43 J9KWM9 X1WXT5 X1WT13

PDB

1WDU E-value=9.85416e-10, Score=158

KEGG

NA

GO

GO:0003676 GO:0008270 GO:0016021 GO:0005179 GO:0005576 GO:0020037 GO:0016020 GO:0004888 GO:0007166 GO:0016773 GO:0006096 GO:0006281 GO:0006259

Length:

1572

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

14.16574

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00000

outside

1 - 1572

Pi

0

Theta

0

Tajima's D

0

CLR

0.001713

CSRT

0

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree