Gene

KWMTBOMO16748

Annotation

hypothetical_protein_KGM_02047_[Danaus_plexippus]

Location

Bomo_Scaf165(+):20366-21981      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.609 Nuclear   Reliability : 1.192

CDS

ATGCTTCACCCTACACAAGATGTATTTGGGGAATATGATAAAAAACAAGGGATCAGTACTGGATGGCTCACCAATCAAACTCTAATTCAATTTAAATTTTCAAACAATCCCTTACAATTAAAAAGCCGTTTAGCTGAAAGACTCATAAATATTAAAGTCACTCCAGTGAAATTATTCTTTGGAACAGAACCGCATATTGAAGAATCTTCGCTAAGTACTGATACCACAGATACTGAGTTACCAGCTGGAGTGCTAGTGGAAGTTGCAACACTGGCTAATGATCCTAATATATGTCATTTAAAACCGCAGGAACAATTTGGAAGAGAGTACAAATTAAATGATGTTCTGCTAGTAAATGTTACCACACCAAAATCCAAGCAGCTGGCTTATCTAATAGACTTTTATTCATATAGTAGTCGTGCAGCATCTGAAGATCCTCCTTGTCATGTTGGATACACTTATGTGTTACCAAACATGTTCAAACCCTCAGAAGGTAATTTAGAATTGCCAGTAACATGCAATGTAAAACATCGACCTCTTGGAACTGTGAATTTTGGATACCTAACAGTTTGTCCTATACAGGAAAAGCTTTGTAACTTGCAGGTTTCGTATGCCAAGTATTGGGACTCAAGTTGGACAGGGTTAGAAGTGGGACACAGAGGCTTGGGTGCAAGTTTTAAAACAAAAGAAGGAAATGCTATTCGTGAGAATACAATAGCTTCTCTTAAAAAAGCAGCTGCAAGTGGTGCAGATCTGCTAGAGTTTGATGTTCAACTGAGTAAAGATATGATACCAGTTATTTATCATGACTTTTATGTGTGCATATCAATGAAAAGAAAGAAGGAAATTGAATTTACAGAAATGCTTGAATTACCAGTGAAGGACTTGACTTTGGAACACCTACAAAAACTGAAGGTACATTCATGA

Protein

MLHPTQDVFGEYDKKQGISTGWLTNQTLIQFKFSNNPLQLKSRLAERLINIKVTPVKLFFGTEPHIEESSLSTDTTDTELPAGVLVEVATLANDPNICHLKPQEQFGREYKLNDVLLVNVTTPKSKQLAYLIDFYSYSSRAASEDPPCHVGYTYVLPNMFKPSEGNLELPVTCNVKHRPLGTVNFGYLTVCPIQEKLCNLQVSYAKYWDSSWTGLEVGHRGLGASFKTKEGNAIRENTIASLKKAAASGADLLEFDVQLSKDMIPVIYHDFYVCISMKRKKEIEFTEMLELPVKDLTLEHLQKLKVHS

Similarity

Belongs to the RNase T2 family.

Uniprot

A0A212F0T5   A0A3S2N6H4   A0A194R2M2   A0A194PKN3   A0A0L7KNP5   A0A2H1X064   + More
A0A2A4IV40   A0A2A4IWP3   A0A2W1BZT7   A0A084W8U8   B0WPG3   A0A1L8DC78   A0A182Q6P8   A0A182SM15   A0A182KFG8   A0A1B0CK74   A0A182TER7   A0A1Q3FY96   A0A1Q3FYG6   A0A1Q3FYD2   A0A1Q3FY88   Q16GK4   A0A2C9GRA4   A0A453Z005   A0A182X341   A0A1S4G7Y1   A0A182YDJ8   A0A182J9V2   A0A182GKE4   A0A2M4ALH9   A0A2M4BGW0   A0A2M4BGX2   A0A182ML41   W5JAD7   A0A182PLN4   A0A182KTS7   A0A182NC15   A0A182RBJ8   A0A182WGR8   A0A2M4CHL4   A0A2M4CHN0   A0A2M4CHL5   A0A0K8TR97   A0A182UWU9   A0A182F2F2   A0A1J1IJK6   A0A067R2C6   B4LRR7   A0A0M4EEZ6   V9I8L2   V9I8Y4   A0A310SCM2   V9I6X4   B4MVB4   V9I6V4   Q9VQU3   A0A2A3ENC8   A0A0M8ZUI6   B4I329   B4Q9P7   A0A154PJG6   B3N372   B4NYE8   A0A3L8DDC4   A0A3B0JZG3   A0A0L7QYZ6   B4JQJ1   A0A1W4UU73   A0A1I8Q894   A0A026WB24   A0A158P2K7   A0A195AVL5   A0A139WH04   E2BUY4   B3MP63   A0A195DNM7   B4KJY7   A0A151ILG5   B4G9C7   A0A195FID5   A0A2J7QNK3   D6WL75   A0A1A9XV81   A0A1B0BC83   E0VJT1   Q29MF0   A0A2J7QNP6   A0A1A9WUX4   A0A232EQZ8   T1PDJ3   A0A1I8MPE4   A0A1B0ETE4   A0A1B0A613   A0A1B6CF44   A0A1W4WEM6   W8B5E3   A0A1B0CZE2   A0A1A9UDF3   A0A336KEV4   K7J906  

Pubmed

22118469    26354079    26227816    28756777    24438588    17510324    + More
12364791    25244985    26483478    20920257    23761445    20966253    26369729    24845553    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    17550304    30249741    24508170    21347285    18362917    19820115    20798317    18057021    20566863    15632085    23185243    28648823    25315136    24495485    20075255   

EMBL

AGBW02011047    OWR47314.1    RSAL01000302    RVE42729.1    KQ460870    KPJ11769.1    + More
KQ459601    KPI93887.1    JTDY01008214    KOB64676.1    ODYU01012364    SOQ58642.1    NWSH01005932    PCG63837.1    PCG63838.1    KZ149895    PZC78777.1    ATLV01021515    KE525319    KFB46642.1    DS232023    EDS32342.1    GFDF01010032    JAV04052.1    AXCN02002066    AJWK01015872    AJWK01015873    AJWK01015874    AJWK01015875    AJWK01015876    AJWK01015877    AJWK01015878    GFDL01002496    JAV32549.1    GFDL01002485    JAV32560.1    GFDL01002494    JAV32551.1    GFDL01002491    JAV32554.1    CH478268    EAT33371.1    APCN01001728    AAAB01008980    JXUM01069817    JXUM01069818    JXUM01069819    JXUM01069820    JXUM01069821    JXUM01069822    JXUM01069823    KQ562571    KXJ75581.1    GGFK01008303    MBW41624.1    GGFJ01003149    MBW52290.1    GGFJ01003146    MBW52287.1    AXCM01001931    ADMH02001841    ETN60941.1    GGFL01000658    MBW64836.1    GGFL01000656    MBW64834.1    GGFL01000659    MBW64837.1    GDAI01000950    JAI16653.1    CVRI01000054    CRK99946.1    KK852805    KDR16133.1    CH940649    EDW64669.1    CP012523    ALC38867.1    JR035940    AEY56806.1    JR035938    AEY56804.1    KQ761289    OAD57913.1    JR035939    AEY56805.1    CH963857    EDW76459.2    JR035937    AEY56803.1    AE014134    AY069505    AAF51071.3    AAL39650.1    KZ288204    PBC33238.1    KQ435840    KOX71415.1    CH480820    EDW54174.1    CM000361    CM002910    EDX03658.1    KMY87960.1    KQ434936    KZC11953.1    CH954177    EDV57671.1    CM000157    EDW87581.1    QOIP01000010    RLU18153.1    OUUW01000004    SPP79069.1    KQ414685    KOC63791.1    CH916372    EDV99171.1    KK107310    EZA52876.1    ADTU01006953    ADTU01006954    ADTU01006955    KQ976731    KYM76278.1    KQ971343    KYB27179.1    GL450772    EFN80521.1    CH902620    EDV31229.1    KQ980724    KYN14099.1    CH933807    EDW12590.1    KRG03315.1    KQ977120    KYN05593.1    CH479180    EDW28957.1    KQ981523    KYN40430.1    NEVH01013194    PNF30159.1    EFA03495.2    JXJN01011881    DS235226    EEB13637.1    CH379060    EAL33744.1    KRT04177.1    PNF30163.1    NNAY01002688    OXU20768.1    KA646764    AFP61393.1    CCAG010006187    GEDC01025224    JAS12074.1    GAMC01012718    JAB93837.1    AJVK01009549    AJVK01009550    AJVK01009551    AJVK01009552    UFQS01000338    UFQT01000338    SSX02969.1    SSX23336.1   

Proteomes

UP000007151    UP000283053    UP000053240    UP000053268    UP000037510    UP000218220    + More
UP000030765    UP000002320    UP000075886    UP000075901    UP000075881    UP000092461    UP000075902    UP000008820    UP000075840    UP000076407    UP000076408    UP000075880    UP000069940    UP000249989    UP000075883    UP000000673    UP000075885    UP000075882    UP000075884    UP000075900    UP000075920    UP000075903    UP000069272    UP000183832    UP000027135    UP000008792    UP000092553    UP000007798    UP000000803    UP000242457    UP000053105    UP000001292    UP000000304    UP000076502    UP000008711    UP000002282    UP000279307    UP000268350    UP000053825    UP000001070    UP000192221    UP000095300    UP000053097    UP000005205    UP000078540    UP000007266    UP000008237    UP000007801    UP000078492    UP000009192    UP000078542    UP000008744    UP000078541    UP000235965    UP000092443    UP000092460    UP000009046    UP000001819    UP000091820    UP000215335    UP000095301    UP000092444    UP000092445    UP000192223    UP000092462    UP000078200    UP000002358   

PRIDE

Q9VQU3   

Pfam

PF00686   CBM_20        + More
PF03009   GDPD
PF00445   Ribonuclease_T2
PF04869   Uso1_p115_head
PF04871   Uso1_p115_C
PF18770   Arm_vescicular
PF06585   JHBP

Interpro

IPR013783   Ig-like_fold        + More
IPR002044   CBM_fam20       
IPR033506   Gde1       
IPR017946   PLC-like_Pdiesterase_TIM-brl       
IPR030395   GP_PDE_dom       
IPR013784   Carb-bd-like_fold       
IPR033130   RNase_T2_His_AS_2       
IPR033697   Ribonuclease_T2_eukaryotic       
IPR001568   RNase_T2-like       
IPR036430   RNase_T2-like_sf       
IPR006953   Vesicle_Uso1_P115_head       
IPR041209   P115_Arm_rpt       
IPR016024   ARM-type_fold       
IPR006955   Uso1_p115_C       
IPR011989   ARM-like       
IPR038606   To_sf       
IPR010562   Haemolymph_juvenile_hormone-bd       
IPR034839   CBM20_GPCPD1       

SUPFAM

SSF49452   SSF49452        + More
SSF51695   SSF51695       
SSF55895   SSF55895       
SSF48371   SSF48371       

Gene 3D

2.60.40.10     3.20.20.190     3.90.730.10     1.25.10.10     3.15.10.30    

CDD

cd01061  RNase_T2_euk
cd05814  CBM20_Prei4

ProteinModelPortal

A0A212F0T5   A0A3S2N6H4   A0A194R2M2   A0A194PKN3   A0A0L7KNP5   A0A2H1X064   + More
A0A2A4IV40   A0A2A4IWP3   A0A2W1BZT7   A0A084W8U8   B0WPG3   A0A1L8DC78   A0A182Q6P8   A0A182SM15   A0A182KFG8   A0A1B0CK74   A0A182TER7   A0A1Q3FY96   A0A1Q3FYG6   A0A1Q3FYD2   A0A1Q3FY88   Q16GK4   A0A2C9GRA4   A0A453Z005   A0A182X341   A0A1S4G7Y1   A0A182YDJ8   A0A182J9V2   A0A182GKE4   A0A2M4ALH9   A0A2M4BGW0   A0A2M4BGX2   A0A182ML41   W5JAD7   A0A182PLN4   A0A182KTS7   A0A182NC15   A0A182RBJ8   A0A182WGR8   A0A2M4CHL4   A0A2M4CHN0   A0A2M4CHL5   A0A0K8TR97   A0A182UWU9   A0A182F2F2   A0A1J1IJK6   A0A067R2C6   B4LRR7   A0A0M4EEZ6   V9I8L2   V9I8Y4   A0A310SCM2   V9I6X4   B4MVB4   V9I6V4   Q9VQU3   A0A2A3ENC8   A0A0M8ZUI6   B4I329   B4Q9P7   A0A154PJG6   B3N372   B4NYE8   A0A3L8DDC4   A0A3B0JZG3   A0A0L7QYZ6   B4JQJ1   A0A1W4UU73   A0A1I8Q894   A0A026WB24   A0A158P2K7   A0A195AVL5   A0A139WH04   E2BUY4   B3MP63   A0A195DNM7   B4KJY7   A0A151ILG5   B4G9C7   A0A195FID5   A0A2J7QNK3   D6WL75   A0A1A9XV81   A0A1B0BC83   E0VJT1   Q29MF0   A0A2J7QNP6   A0A1A9WUX4   A0A232EQZ8   T1PDJ3   A0A1I8MPE4   A0A1B0ETE4   A0A1B0A613   A0A1B6CF44   A0A1W4WEM6   W8B5E3   A0A1B0CZE2   A0A1A9UDF3   A0A336KEV4   K7J906  

PDB

2PZ0     E-value=3.93694e-06,     Score=120

KEGG

NA   

GO

GO:0046475   GO:0047389   GO:2001070   GO:0030246   GO:0033897   GO:0003723   GO:0006629   GO:0008565   GO:0006886   GO:0048280   GO:0000139   GO:0008081   GO:0020037   GO:0016020   GO:0004888   GO:0007166   GO:0016773   GO:0006096   GO:0006281   GO:0006259  

PANTHER

PTHR22958:SF1  

Length:

308

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00066

Exp number, first 60 AAs:

0.00016

Total prob of N-in:

0.00751

outside

1  -  308

 

 

Pi

0

Theta

0

Tajima's D

0

CLR

0

CSRT

0

Interpretation

Uncertain