Silkworm Genome Informatics Database

Gene

KWMTBOMO16741 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013806

Annotation

PREDICTED:_uncharacterized_protein_LOC105841662_[Bombyx_mori]

Location

Bomo_Scaf149(+):3626-5475 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.264 Mitochondrial Reliability : 1.467 Nuclear Reliability : 1.92

CDS

ATGTACCGCACACCCACGACTTCGGGCGCCGCTAAAAACCCTACCACTCCCAGCCCTGCTACCACAACCGCAGTGGCGCAGGGTGCTGCAAGGACGTTTATCAAAAGACCGGACGCCAAAAGAAGATCACTGGATAATATGGACGTTTATAAAAAGCAGCAACAAAACTACGCTGCACTACCGACTGATCAGCTCCTCCAGGATATAATGAAGACTTTTGAGGATATACCCTCCAAAGTCCAAGAGTACCCTCAGATGAGGAGGGATATCAAACAGTTCCTGGAGGTGCAGTCAGATAAGGGTATACGAGCAATCTTCGAGCTCAGTAGGCGTATCCAAAGTCTCGAAGCAGAGGCCCCAAAAACAAGGACACCTACAGAAACCTTGCCGTCCGAAGTCCAGGATATCATCCTTGGGAAGCTGGGAGAGGTAGAAGCGACACTGACCGAGCGACTGAACAATATGGAGAGAAGTCTGAAAAAGGACATAACAGAACTGAATGACGAAAACGACAGCCGAGGCTCCGACGTGATCGACAAGATCATCGACCGGATCGACGAGACCAAAGATGCCATGGACAGAACGACCGAGGCGGTCGAGAGTCGAATGCACGCGCTCGTTAAGGATCTGGTCGGTGGAATTGCCGAGGATGTCGTTGCAGCCAAAAACGAACTCACGGAGGTCGCAAAAGGATTGGCATGCGAATCAAATCTAGCCCCAGTCCCCAGATCTTACGCCAGCGTCGCAGCAGCCAAGCCCGTCCACCGTCCTGCACTTCATTCAATGGCGGTCACCCTTGAAGGTAGTCAGGAGACTGCAGACGAGGTGCTCGCCAGGGTGAAAAGGGCGGTCGATGCCAGAGGCACCGGCCTTAAAATTAATAAGGTTCGAAAGGCCAAGAACCAAACGATTATACTGGGCTGCGACACTGAAGAGGAACGAAAGAAAGTCCAAGAAATAATAGAGAGTCGCGGGGACGGACTGGTAGTAGCGCCCATGAAGAACAAGAGCCCTCTAGTCGTCCTGAAGGATGTGTTTGTGGATAGTGAGGATGACGATATAATTAAGGCGCTCCACACACAGAATAAGGACGTATTTGTGGGTATACCTGAAGAGAACATGGAGATGGTTATCAAATTTAAAAAACGTACCAGGAATCCAAAGACAGCACACATCGTTCTCCAGGTGAAGCCGAAAGTATGGCAGAGGATGACGGAAGCTGGAGCCCTCTATCTGGACCTTCAGAGGGTCAGAGTCGAGGACCAGTCTCCGCTCATCCAATGCACGAGGTGCCTCGCATTTGGACATGGTCGAAAATTTTGCACCGAGAGTGTGGACAGATGCAGTCACTGTGGAGGACCGCATCTGCGCGAGAAATGCGCAGACTTCATCGCAGGGACCGAACCGCAGTGCTGCAACTGCTCACACTCTGGGTTGCGGAAGGCCGACCATAACGCTTTTAGCGCCGAATGCCCGGTACGAAAAAAGTGGGATTACTTGGCTCGCGCTAACACAACATATGCATAA

Protein

MYRTPTTSGAAKNPTTPSPATTTAVAQGAARTFIKRPDAKRRSLDNMDVYKKQQQNYAALPTDQLLQDIMKTFEDIPSKVQEYPQMRRDIKQFLEVQSDKGIRAIFELSRRIQSLEAEAPKTRTPTETLPSEVQDIILGKLGEVEATLTERLNNMERSLKKDITELNDENDSRGSDVIDKIIDRIDETKDAMDRTTEAVESRMHALVKDLVGGIAEDVVAAKNELTEVAKGLACESNLAPVPRSYASVAAAKPVHRPALHSMAVTLEGSQETADEVLARVKRAVDARGTGLKINKVRKAKNQTIILGCDTEEERKKVQEIIESRGDGLVVAPMKNKSPLVVLKDVFVDSEDDDIIKALHTQNKDVFVGIPEENMEMVIKFKKRTRNPKTAHIVLQVKPKVWQRMTEAGALYLDLQRVRVEDQSPLIQCTRCLAFGHGRKFCTESVDRCSHCGGPHLREKCADFIAGTEPQCCNCSHSGLRKADHNAFSAECPVRKKWDYLARANTTYA

Uniprot

H9JG79 A0A212EIV6 A0A2H1WF63 A0A0K1IJN6 A0A2R7WYT6 A0A2P8XUI0 + More
A0A2P8Y8S6 A0A1B6KVI1 A0A2R7WH59 K7JPM6 K7JSQ1

Pubmed

19121390 22118469 29403074 20075255

EMBL

BABH01002157 AGBW02014565 OWR41401.1 ODYU01008279 SOQ51725.1 KP771712 + More
AKU04649.1 KK855758 PTY23785.1 PYGN01001327 PSN35652.1 PYGN01000801 PSN40666.1 GEBQ01024527 JAT15450.1 KK854804 PTY18888.1 AAZX01023354 AAZX01024918 AAZX01023287

Proteomes

UP000005204 UP000007151 UP000245037 UP000002358

PRIDE

H9JG79

Pfam

PF01826   TIL        + More
PF00078   RVT_1
PF14529   Exo_endo_phos_2
PF00098   zf-CCHC

Interpro

IPR002919   TIL_dom        + More
IPR036084   Ser_inhib-like_sf
IPR001878   Znf_CCHC
IPR036691   Endo/exonu/phosph_ase_sf
IPR036875   Znf_CCHC_sf
IPR005135   Endo/exonuclease/phosphatase
IPR000477   RT_dom

SUPFAM

SSF57567   SSF57567        + More
SSF57756   SSF57756
SSF56219   SSF56219

Gene 3D

3.60.10.10

ProteinModelPortal

H9JG79 A0A212EIV6 A0A2H1WF63 A0A0K1IJN6 A0A2R7WYT6 A0A2P8XUI0 + More
A0A2P8Y8S6 A0A1B6KVI1 A0A2R7WH59 K7JPM6 K7JSQ1

PDB

4UX3 E-value=0.0418929, Score=87

KEGG

105841662 no KO assigned | (RefSeq) uncharacterized LOC105841662

GO

GO:0003676 GO:0008270

Length:

508

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00283

Exp number, first 60 AAs:

0.00283

Total prob of N-in:

0.00578

outside

1 - 508

Pi

1.736134

Theta

7.220183

Tajima's D

-2.188982

CLR

0

CSRT

0.00484975751212439

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree