SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16738
Pre Gene Modal
BGIBMGA012739
Annotation
PREDICTED:_peroxidase-like?_partial_[Papilio_xuthus]
Location in the cell
Cytoplasmic   Reliability : 2.067
 

Sequence

CDS
ATGGGCTCGAACATATTCCACATATGGTTCTACAGACTCCATAACGTTGTGGCCGCGAATCTGGAGAAGATCAATCCCTGTTGGGATGACAATAAAATTTTCTACACGACGAGAGAAATTCTGATAGCTGGTTATTTACAAATATATTACTATCAATTTTTGCCTCTTTTGTTTGGGATGGAAAGGCTGATAAAAGACGGGGTTATATCAAAACACAAAGGCTACAGAGATGTTTATGATGAGAAGATTATACCACAAATGTCCGACGAGTATTCTTATGTGCTACGATGGTTTCACATTGCACAAGAAGCGACCCTTGAATTGTACGATGAAAACTACAAGTGCTTCAAGACATTCCCTATGATAGCTCGTGGTAGTTTCTTGCAGTCCACTTCTAAATTTATGGACCATGCTGTGGATCCTGATATCTCCGAAGTTGGCTTGGGAGGGTTGCAGTATGCATTCGACATTACAGCTGCGGATGTAGCAAAAGGACGATTATTTGGATTCGCTCCATATGTTGATTATTTGGAAGTATGCAGAAAGAAGAAGTTCAAAACCTTCAAGGATCTTCTTGAAGTGATGGATGAAGATAGAATTAAACGCCTTAGAAGAGTTTACAAATGTGCACAAGACGTAGACCTGATGCCTGGGCTATGGTCTGAGCGAAAAATAAAGGATGGAAGTGTCCCGGTACCCTATACTGCCTAA
Protein
MGSNIFHIWFYRLHNVVAANLEKINPCWDDNKIFYTTREILIAGYLQIYYYQFLPLLFGMERLIKDGVISKHKGYRDVYDEKIIPQMSDEYSYVLRWFHIAQEATLELYDENYKCFKTFPMIARGSFLQSTSKFMDHAVDPDISEVGLGGLQYAFDITAADVAKGRLFGFAPYVDYLEVCRKKKFKTFKDLLEVMDEDRIKRLRRVYKCAQDVDLMPGLWSERKIKDGSVPVPYTA

Summary

EMBL
BABH01034743    BABH01034744    AK405426    BAM20744.1    KQ460416    KPJ14922.1    + More
KQ459324    KPJ01647.1    KPJ01646.1    KPJ01645.1    AK401278    BAM17900.1    RSAL01000046    RVE50539.1    KPJ14923.1    ODYU01008556    SOQ52260.1    KZ149907    PZC78257.1    NWSH01006580    PCG63355.1    AGBW02012596    OWR44740.1    ODYU01007479    SOQ50286.1    BABH01013455    PZC78258.1    ODYU01006337    SOQ48101.1    ODYU01007063    SOQ49501.1    ODYU01007226    SOQ49823.1    PZC78259.1    BABH01034746    BABH01034747    NWSH01001320    PCG71707.1    KJ995811    AIN39494.1    NWSH01002854    PCG67434.1    BABH01013458    BABH01013459    BABH01013460    ODYU01004596    SOQ44641.1    BABH01028746    BABH01028747    BABH01028748    KQ459564    KPI99614.1    RSAL01001640    RVE40744.1    RSAL01000844    RVE41114.1    RSAL01000273    RVE43156.1    RSAL01000231    RVE43837.1    RVE41111.1    KQ459837    KPJ19761.1    BABH01013447    BABH01013448    ODYU01000046    SOQ34155.1    KZ149956    PZC76463.1    PZC76461.1    NWSH01006414    PCG63451.1    PZC76464.1    NWSH01006200    PCG63597.1    NWSH01001116    PCG72533.1    PCG72532.1    RSAL01000083    RVE48485.1    GDKW01003332    JAI53263.1    ACPB03011632    JTDY01000732    KOB76072.1    GDIQ01192196    JAK59529.1    IACF01005278    LAB70864.1    GDIQ01210487    JAK41238.1    GFXV01000266    MBW12071.1    GDIQ01053609    JAN41128.1    GDIQ01070734    JAN24003.1    GDIQ01075484    JAN19253.1    LJIJ01000089    ODN03012.1    GDIP01179921    JAJ43481.1    GDIQ01227980    JAK23745.1    UYRR01034464    VDK61142.1    LIAE01010510    PAV59662.1    GEDC01011809    JAS25489.1    GDIP01069488    JAM34227.1    UYRR01000388    VDK17833.1    GDIP01185931    JAJ37471.1    GDIQ01189403    JAK62322.1    GDIQ01173053    JAK78672.1    GDIP01071190    JAM32525.1    GDIQ01091829    JAL59897.1    GDIP01122932    JAL80782.1    GDIP01199332    JAJ24070.1    GEDC01020121    JAS17177.1    GDIP01109879    JAL93835.1    GDIQ01150074    JAL01652.1    GDIP01074949    JAM28766.1    GDIP01122937    JAL80777.1    GDIQ01161021    JAK90704.1    GDIP01199331    JAJ24071.1    GDIP01090990    JAM12725.1    GDIQ01123279    JAL28447.1    GDIQ01175401    JAK76324.1    GDIP01044106    JAM59609.1    GDIQ01155217    JAK96508.1    GDIQ01219353    GDIQ01064750    GDIQ01030254    JAK32372.1    LIAE01007263    PAV80481.1    GDIQ01079931    JAN14806.1    GDIQ01106595    JAL45131.1    GDIP01122933    JAL80781.1    GDIP01199377    JAJ24025.1    GDIQ01069105    JAN25632.1    GDIP01007020    JAM96695.1    GDIQ01268388    JAJ83336.1    GDIQ01012997    JAN81740.1    GBHO01004699    JAG38905.1    JO841369    AEO32986.1    GDHC01005325    JAQ13304.1   
Pfam
PF03098   An_peroxidase        + More
PF00075   RNase_H
PF00083   Sugar_tr
Interpro
IPR010255   Haem_peroxidase_sf        + More
IPR019791   Haem_peroxidase_animal       
IPR037120   Haem_peroxidase_sf_animal       
IPR029585   Pxd-like       
IPR036397   RNaseH_sf       
IPR002156   RNaseH_domain       
IPR012337   RNaseH-like_sf       
IPR005828   MFS_sugar_transport-like       
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR029590   Pxt       
SUPFAM
SSF48113   SSF48113        + More
SSF53098   SSF53098       
SSF103473   SSF103473       
Gene 3D
PDB
3R5Q     E-value=8.51786e-14,     Score=184

Ontologies

Topology

Length:
236
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
5.31625999999999
Exp number, first 60 AAs:
5.21041
Total prob of N-in:
0.21595
outside
1  -  236
 
 

Population Genetic Test Statistics

Pi
0
Theta
0
Tajima's D
0
CLR
0
CSRT
0
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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