SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16730
Pre Gene Modal
BGIBMGA002825
Annotation
hypothetical_protein_KGM_13319_[Danaus_plexippus]
Full name
Dynein assembly factor 3, axonemal       + More
Dynein assembly factor 3, axonemal homolog      
Location in the cell
Cytoplasmic   Reliability : 2.3
 

Sequence

CDS
ATGTTCTGGGGTGTGAGTCCAGCCTTAGATCTACAGCAAGAGTATCTCAAATATGGCGATGAACACGCGTACGAACTAAATTTTCTCGTGATTGGAGGCTGCGATGGAAGACATCTGCTTAAAACTCTGGCCCAAGCTTATCGGCACAACCGGAGGTACATGAATCTTTTCGTGATCGACGGATGCCCGGAGTTGATAGCTAGGCAACTGCTTCTTATGTCTTTGGCATTAGAAAAGACGACGAGATGTGGTTTACTGGAGAAAACAAGGCGTTATCTCGAGGTATATGGGAATCTGCTACTGCGGCCGCCAACTTCGAGGTATGTAATGGCCAAAGCTCGTCAGTTGGTCGGTATGATCACCAATCCTGACTACATGAGCTGTCTACTCCCTAGTGTATCCCTGGAACAGATGAAATATAAAGAGAGGGACTATTTGGAAAACTTGATGAATTTCTGGACGACCGGAAACACTAATCAGTACAATGCCTGTGAATTGTGGGAATACAGACTTAGAAATAGCCTGGGAGTGCGGTATGACAATAGACATGGAGTTTACGATTGGGACTATCATATGAGGCTGAAGGAGATCGCCAGTGCTGTATGCTTTCAAGAGTACAAGCATTTCAGAGAGCACGGAGTGGCCTTTACGTGGTTGGAGACTGAAGTGTGCCGTCCAAACGTTACTTTTGCGGCTGGTGTTTATAAATGCGGAGACCGATACCTTCACAGAGGCTATTTGGGTGATCTTGTGACATCCCCGTACATTTGCTTGGGCCTCGATTGCGAGGACAAAGACATGCTGAAATCGACCCATGGCGTGAACTACAAGCGCTCGACTGACATCAGCGAACGTAATGTTATGCGGATGATGTATGAGATGGAAAACCACAAGAAATTTGATGTCGCCGAGATGGAAATCGAAAATGAACGGAATTTGGGTATGGTTGTATTGAGTGAGTTCGACGCTAAGATTTCGGAGTGTGGACCCGAGATTCCGTTGGTGTTGCGAGAAGACCGCGAGACGTACATTGATGTGGACTATGGAAAAGTTCACTTCTTATCTGTCAGCGCCTTAGATCATTACCCCCATAAGCCTCAGTTCCAAGGGCTGTTCCACGGGGTCTTCGTGGGACAGAATATGGTGTCGCGCATCAAGCCCAGTCTCTGGTCGATGGCGCGTGATGATGCTGTAGTTATCATGGAGTCCAGGAAATACATGATAGAACTAAAACGAGATGACGTTAAGGCGTTTGCCGATCAAATCCAGGAGGCGGCTGCGGCTGGACATTGCGAGAAGATCAAAGCATTTGATCCTGAAAAAGATGATTACGCTCGTTTTGTGATCAGGAGGAAGCGTAGTGAGGGCACAGATTTTTCGTTATAA
Protein
MFWGVSPALDLQQEYLKYGDEHAYELNFLVIGGCDGRHLLKTLAQAYRHNRRYMNLFVIDGCPELIARQLLLMSLALEKTTRCGLLEKTRRYLEVYGNLLLRPPTSRYVMAKARQLVGMITNPDYMSCLLPSVSLEQMKYKERDYLENLMNFWTTGNTNQYNACELWEYRLRNSLGVRYDNRHGVYDWDYHMRLKEIASAVCFQEYKHFREHGVAFTWLETEVCRPNVTFAAGVYKCGDRYLHRGYLGDLVTSPYICLGLDCEDKDMLKSTHGVNYKRSTDISERNVMRMMYEMENHKKFDVAEMEIENERNLGMVVLSEFDAKISECGPEIPLVLREDRETYIDVDYGKVHFLSVSALDHYPHKPQFQGLFHGVFVGQNMVSRIKPSLWSMARDDAVVIMESRKYMIELKRDDVKAFADQIQEAAAAGHCEKIKAFDPEKDDYARFVIRRKRSEGTDFSL

Summary

Description
Required for the assembly of axonemal inner and outer dynein arms. Involved in preassembly of dyneins into complexes before their transport into cilia (By similarity).
Required for the assembly of axonemal inner and outer dynein arms.
Similarity
Belongs to the DNAAF3 family.
Keywords
Cytoplasm   Complete proteome   Reference proteome  
Feature
chain  Dynein assembly factor 3, axonemal
EMBL
BABH01018922    BABH01018923    NWSH01001468    PCG71156.1    PCG71157.1    ODYU01012880    + More
SOQ59405.1    KQ461186    KPJ07385.1    JTDY01001848    KOB72727.1    KQ459472    KPJ00183.1    AGBW02010673    OWR48066.1    GEDC01026449    JAS10849.1    KQ971372    EFA10380.1    ACPB03019849    GFTR01006392    JAW10034.1    BT126767    AEE61729.1    KB631865    ERL86788.1    DS235872    EEB19536.1    UFQS01002005    UFQT01002005    SSX12938.1    SSX32380.1    ADMH02002070    ETN59625.1    UFQS01000040    UFQT01000040    SSW98189.1    SSX18575.1    RCHS01002836    RMX45373.1    CH477773    EAT36370.1    CH477672    EAT37442.1    NEDP02003747    OWF47948.1    GFXV01000243    MBW12048.1    ABLF02034783    GGMR01006937    MBY19556.1    GFDL01004368    JAV30677.1    AAAB01008807    EDO64652.1    DS232134    EDS35807.1    ATLV01023246    KE525341    KFB48714.1    AXCN02000540    KB199650    ESP05132.1    AXCM01002191    APCN01000178    NOWV01000063    RDD42006.1    APGK01040992    APGK01040993    KB740986    ENN76147.1    GDHF01005049    JAI47265.1    CM000071    EAL25903.2    CH479183    EDW36408.1    CH964282    EDW85719.1    OUUW01000001    SPP75849.1    GAMC01004470    JAC02086.1    CM000158    EDW91622.1    JXJN01018283    CM004478    OCT72927.1    BC108525    CH940648    EDW62168.1    HACG01032236    CEK79101.1    OCT72926.1    CCAG010014016    GBXI01000141    JAD14151.1    CH916367    EDW02744.1    JRES01000729    KNC28929.1    CH954179    EDV55091.1    CVRI01000035    CRK92751.1    AFYH01042599    AFYH01042600    AFYH01042601    AFYH01042602    AFYH01042603    CH480816    EDW48469.1    AAWZ02025909    CM002911    KMY94854.1    CM000362    EDX07686.1    JW866489    AFO99006.1    AE013599    BT016145    BT050480    AKHW03002822    KYO37167.1    LSMT01000048    PFX30585.1    KZ288345    PBC27609.1    CH933808    EDW08763.1    KQ976657    KYM78616.1    GL887547    EGI70826.1    ADTU01027919    CP012524    ALC40876.1    KQ977329    KYN03500.1    KQ981954    KYN32027.1    CH902619    EDV36411.1    AAMC01079094    JSUE03022350    JSUE03022351    JSUE03022352   
Pfam
PF14737   DUF4470        + More
PF14740   DUF4471
PF02878   PGM_PMM_I
PF00408   PGM_PMM_IV
PF11636   Troponin-I_N
PF00992   Troponin
Interpro
IPR028235   DNAAF3_C        + More
IPR039304   DNAAF3       
IPR027974   DUF4470       
IPR036900   A-D-PHexomutase_C_sf       
IPR016657   PAGM       
IPR005844   A-D-PHexomutase_a/b/a-I       
IPR016066   A-D-PHexomutase_CS       
IPR016055   A-D-PHexomutase_a/b/a-I/II/III       
IPR005843   A-D-PHexomutase_C       
IPR000253   FHA_dom       
IPR001978   Troponin       
IPR038077   Troponin_sf       
IPR021666   Troponin-I_N       
SUPFAM
SSF55957   SSF55957        + More
SSF53738   SSF53738       
Gene 3D

Ontologies

Topology

Subcellular location
Cytoplasm  
Length:
461
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0370500000000002
Exp number, first 60 AAs:
0.01299
Total prob of N-in:
0.00209
outside
1  -  461
 
 

Population Genetic Test Statistics

Pi
13.691127
Theta
13.345158
Tajima's D
-0.334645
CLR
0.054239
CSRT
0.280385980700965
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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