Silkworm Genome Informatics Database

Gene

KWMTBOMO16719 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010203

Annotation

serine_protease_[Bombyx_mandarina]

Location

Bomo_Scaf127(-):20677-21625 View in EpiBrowser

Location in the cell

Extracellular Reliability : 2.611

CDS

ATGCGCACGCAGCGAAAGCTCTCAAAATGGAAAAAAATTCCGATTTTTCCAGCTGCTTCGGGAGCCAACAACCAACAAAAACGCCAAGTGAGCCTCCAGGTCATTACCAACGCCGTCTGCGCCCGCACGTACGGAAACTCTGTGATCATTGGCTCCACCCTCTGTGTTTCCGGCGCTAACGGTCGCAGCACCTGCAGCGGAGACTCCGGCGGCCCTCTCTCCATCGGCAGCGGCGGAGGCCGTCAGCTGGTCAGTACACTAGTTTTGTTTAACTTTACTGCTTTAACCGGTTGCCTTTTTTTTATTGCTTAG

Protein

MRTQRKLSKWKKIPIFPAASGANNQQKRQVSLQVITNAVCARTYGNSVIIGSTLCVSGANGRSTCSGDSGGPLSIGSGGGRQLVSTLVLFNFTALTGCLFFIA

Similarity

Belongs to the peptidase S1 family.

Uniprot

H9JL02 H9JY11 Q58I80 H9JY13 Q762I9 O01953 + More
H9JY10 Q58I79 H9JY12 A0A437BEZ8 A0A0M4LSN9 A0A3S2LL18 A0A410KKC8 A0A0M4M1X5

Pubmed

19121390 15033574 10380113

EMBL

BABH01011411 BABH01011412 BABH01011413 BABH01041853 AY945210 EU338400 + More
AAX39408.1 ABY58153.1 BABH01041861 AB117641 BAD13342.1 BABH01042790 AB003670 BAA20136.1 BABH01041852 AY945211 DQ310733 AAX39409.1 ABC26003.1 BABH01041859 BABH01041860 RSAL01000073 RVE48983.1 KR024679 ALE15221.1 RVE48982.1 MH201552 QAR48645.1 KR024673 ALE15215.1

Proteomes

UP000005204 UP000283053

PRIDE

H9JL02 H9JY11 H9JY13 Q762I9 O01953 H9JY10 + More
Q58I79 H9JY12

Pfam

PF00089 Trypsin

Interpro

IPR033116   TRYPSIN_SER        + More
IPR001254   Trypsin_dom
IPR009003   Peptidase_S1_PA
IPR018114   TRYPSIN_HIS
IPR001314   Peptidase_S1A

SUPFAM

SSF50494 SSF50494

CDD

cd00190 Tryp_SPc

ProteinModelPortal

H9JL02 H9JY11 Q58I80 H9JY13 Q762I9 O01953 + More
H9JY10 Q58I79 H9JY12 A0A437BEZ8 A0A0M4LSN9 A0A3S2LL18 A0A410KKC8 A0A0M4M1X5

KEGG

692357 no KO assigned | (RefSeq) serine protease

GO

GO:0004252 GO:0006508

Length:

103

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

26.19571

Exp number, first 60 AAs:

8.44741

Total prob of N-in:

0.77395

inside

1 - 82

TMhelix

83 - 102

outside

103 - 103

Pi

0

Theta

0

Tajima's D

0

CLR

0

CSRT

0

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
28556443	QVSLQVITNAVCAR	100.00	0.005
28556443	QVSLQVITNAVCAR	100.00	0.005
28556443	QVSLQVITNAVCAR	100.00	0.005
28556443	QVSLQVITNAVCAR	100.00	0.005
28556443	QVSLQVITNAVCAR	100.00	0.005
28556443	QVSLQVITNAVCAR	100.00	0.005
28556443	QLIGITSFGSAQGCQR	100.00	0.005
28556443	QVSLQVITNAVCAR	100.00	0.005
28556443	QVSLQVITNAVCAR	100.00	0.005
28556443	QVSLQVITNAVCAR	100.00	0.005
28556443	QVSLQVITNAVCAR	100.00	0.005
28556443	QVSLQVITNAVCAR	100.00	0.005
28556443	QVSLQVITNAVCAR	100.00	0.005
28556443	QLIGITSFGSDR	100.00	0.005
28556443	QVSLQVITNAVCAR	100.00	0.005
28556443	QVSLQVITNAVCAR	100.00	0.005
28556443	QVSLQVITNAVCAR	100.00	0.005
28556443	QVSLQVITNAVCAR	100.00	0.005
28556443	QVSLQVITNAVCAR	100.00	0.005
28556443	QLIGITSFGSAQGCQR	100.00	0.005
28556443	QLIGITSFGSAQGCQR	100.00	0.005

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree