Gene
KWMTBOMO16715
Pre Gene Modal
BGIBMGA012706
Annotation
PREDICTED:_X-linked_retinitis_pigmentosa_GTPase_regulator-like_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 2.487
Sequence
CDS
ATGGATTTAGAAAAATCTCAATTTTTGTATGTTGATAATTTGTCGCACCGTGGTCAAACAGAGGATGGTCGCGTGTTTATGTGCGGCTCCAACTCCGAAGGGCAGCTCGGTTTAGGCGAAGACTCACGATCCGCTGTACGGTTCACTGAACTCAAGTTCATGGAGAAGATAGCCTTCATCGAATGCGGGTATTATCACACCGTCTTTATAACTACCAAAGGAGCAGTCTTTGTAACTGGCGACAACGAAAATCAGAAACTAGGTATCCAGAAAATAGCCACAAGCATCTACGTTCCGGAAGTTTTGCCCATAAGTACTCCAATAAAGAGCGCCTGCTGTGGGGCTGCACACACGTTCCTTCTGACAATGGATGAATCTAAAATATTGGGCTTCGGTTCCAATGAAAAGGGTCAGCTGGGAATGCCTCGAGAGGTCGAGTTTGTTACTGAGCCTAGCGAAATTGACATGGACATTATGTTCGACGGATACCAACTAAAGTTGGTCGCCTACAACGGACTACTGTACACGTGCGGCGAGTCGAGGCATAATAAACTGTGTTTGGAAGATATCGACGACACCAACTCAAACGAGGTGGTCCCCAATCAATACACCCCTAAACGGGTCACCGCCATGAATGGGCACATCGTAGACAATGTGGCGTGTGGGGGCTGCCACACTCTACTTACGGCCACCAAAGGCTCGAACGCGGACTTCACGAACAACGATTTCAACATTATTAACGAAGCCACCAGACAAATAACTCTCACCGAATTACCGCCCTTACAGAAAATACCAGCGATGAACAAAACCGAAGAGAATCCGTTCTTAATTGAAGACGTGACAAACTCTAACGTGGACGACAAACAGAAAGCGGATAACTTGAATGGAAACACGAACGAGGAATCCGGATCAATAGACTCGTTAGAGGCCAACGTGAGCGGATCACACATCGTAAACATAAACGACCTTGAAATTGAAAATGGAAGTACGCATGACCTGGCTGACCTAAACAAAGACAACATTGATCGTGTTTCCGACACAGGTGACTCGGCTATGGACGTGGTCGAAATTATGGACACGGTGCTTGACGATATGCAGACAAATGTTCATGATTCTGTAAAAGAGGTCACCGATACAGTCCATGAGAAAAAGGAAGTGATTGAAGAAGTAATTCACAAAACGGAAGCAAATGCAAAAGGGCTGCGCGATGATGTCACAAAGATTTTGACCGTTCCTGATAAAGTAGTCGAAATTGCAAATTCCCCGCTGCCTAAAACACCCATATTGCAAGAACTACTCCACGTTCCCGATATATCACAACTCAGTCCTGCTCACAGTAAGCACAGTGACGAGAAAAGTGAAACAGGCCAGTCCGAAAACGAAACAATAACATGCGCATCGGATAAATCTAGTCCTCAAGCTGGGAAGACAGCTAAAACACAAGCCGTTATGCCGATTGTCAGGAGCGAGGACCATATAGACTCTCATGTTGATGAAACCAATGAAGAATCAGATGTTGTTGTTAATAAATTGGAAGAGAAGGGTCGATTTGCGAGGATGTTTCAGTCAATACGAGACAAGGAAAACTCTTGTATGGGGAAGGGCAAAGTCATTGAGAGAAAGTTGTTGGTGAGTTATTAA
Protein
MDLEKSQFLYVDNLSHRGQTEDGRVFMCGSNSEGQLGLGEDSRSAVRFTELKFMEKIAFIECGYYHTVFITTKGAVFVTGDNENQKLGIQKIATSIYVPEVLPISTPIKSACCGAAHTFLLTMDESKILGFGSNEKGQLGMPREVEFVTEPSEIDMDIMFDGYQLKLVAYNGLLYTCGESRHNKLCLEDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTLLTATKGSNADFTNNDFNIINEATRQITLTELPPLQKIPAMNKTEENPFLIEDVTNSNVDDKQKADNLNGNTNEESGSIDSLEANVSGSHIVNINDLEIENGSTHDLADLNKDNIDRVSDTGDSAMDVVEIMDTVLDDMQTNVHDSVKEVTDTVHEKKEVIEEVIHKTEANAKGLRDDVTKILTVPDKVVEIANSPLPKTPILQELLHVPDISQLSPAHSKHSDEKSETGQSENETITCASDKSSPQAGKTAKTQAVMPIVRSEDHIDSHVDETNEESDVVVNKLEEKGRFARMFQSIRDKENSCMGKGKVIERKLLVSY
Summary
Uniprot
EMBL
Proteomes
PRIDE
Pfam
PF00415 RCC1
SUPFAM
SSF50985
SSF50985
Gene 3D
ProteinModelPortal
PDB
4JHN
E-value=4.9573e-26,
Score=294
Ontologies
GO
Topology
Length:
546
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.23477
Exp number, first 60 AAs:
0.03515
Total prob of N-in:
0.01055
outside
1 - 546
Population Genetic Test Statistics
Pi
0
Theta
0
Tajima's D
0
CLR
0.080326
CSRT
0
Interpretation
Uncertain
