Silkworm Genome Informatics Database

Gene

KWMTBOMO16677 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA014524

Annotation

PREDICTED:_collagenase-like_[Bombyx_mori]

Location

Bomo_Scaf089(+):46-1740 View in EpiBrowser

Location in the cell

Extracellular Reliability : 2.473

CDS

ATGAAGGTCTTCGCAGCAGTATTGATGGCGTTGGCGGCCGTGGTCGTGGCAGAAGAGCCCATCGAACTCGACTACCACATCAAGATCGGTATCCCCGGGCCGAGAGTCTTAGACGCGCCGAGGAAGCCGCTGACTTCGACGGTACCAGGATTGTGGGTGGTTCTGCCGCCAACGCTGGTGCTCACCCCCATCTTGCTGGACTTGCTCGTCAGTTCACCCTCGCTCTTGGCACAGCTAACATCTTCTCCGGAGGCACCAGGGTCACACCTCCAATGTCAGATGCACGCAGCTACAACATGGACACCCTCCACAACGCGTCGCCATCATCAACCACAACCATGTTGGCTTCACCAACAACATCCAGCGCATCAACCTAGCCAGTGGAAGCAACAACTTTGCTGGTACTTGGGCCTGGGCTGCCGGCTTCGGAAGGACCTCCGATGCTGCTTCGGAGCCAACAACCAACAAAAACGCCAAGTGAGCCTCCAGGTCATTACCAACGCCGTCTGCGCCCGCACGTTTGGAAACAATGTGATCATTGCCTCCACCCTCTGTGTTGACGGCTCTAACGGTCGCAGCACCTGCAGCGGAGACTCCGGCGGCCTCTCACATCGGCAGCGCGGAAGCCGTCAACTGATCGGTATCACATCGTTCGGATCAGCTCAAGGTTGCCAGAGAGGCCACCCTGCCGGCTTCGCCAGAGTCACATCCTTCAACTCCTGGATCCGGGCTAGAATTTAA

Protein

MKVFAAVLMALAAVVVAEEPIELDYHIKIGIPGPRVLDAPRKPLTSTVPGLWVVLPPTLVLTPILLDLLVSSPSLLAQLTSSPEAPGSHLQCQMHAATTWTPSTTRRHHQPQPCWLHQQHPAHQPSQWKQQLCWYLGLGCRLRKDLRCCFGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGGLSHRQRGSRQLIGITSFGSAQGCQRGHPAGFARVTSFNSWIRARI

Uniprot

NA

ProteinModelPortal

NA

PDB

2HLC E-value=3.00529e-14, Score=188

KEGG

101740143 no KO assigned | (RefSeq) collagenase-like

GO

GO:0004252 GO:0006508 GO:0007608 GO:0016020 GO:0005975 GO:0046835 GO:0016773 GO:0006096 GO:0006281 GO:0006259

SignalP

Position: 1 - 17, Likelihood: 0.979023

Length:

246

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.3149

Exp number, first 60 AAs:

1.96842

Total prob of N-in:

0.15954

outside

1 - 246

Pi

0

Theta

0

Tajima's D

0

CLR

0

CSRT

0

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
28556443	QLIGITSFGSAQGCQR	100.00	2e-04
28556443	QLIGITSFGSAQGCQR	100.00	2e-04
28556443	QLIGITSFGSAQGCQR	100.00	2e-04
28556443	QLIGITSFGSAQGCQR	100.00	2e-04
28556443	LAGLVIALTNGR	100.00	2e-04
28556443	QLIGITSFGSAQGCQR	100.00	2e-04
28556443	QLIGITSFGSAQGCQR	100.00	2e-04
28556443	QLIGITSFGSAQGCQR	100.00	2e-04
28556443	QFTLALGTANIFSGGTR	100.00	2e-04
28556443	QFTLALGTANIFSGGTR	100.00	2e-04
28556443	QVSLQVITNAVCAR	100.00	0.013
28556443	QVSLQVITNAVCAR	100.00	0.013
28556443	QVSLQVITNAVCAR	100.00	0.013
28556443	QVSLQVITNAVCAR	100.00	0.013
28556443	QVSLQVITNAVCAR	100.00	0.013
28556443	QVSLQVITNAVCAR	100.00	0.013
28556443	QLIGITSFGSAQGCQR	100.00	0.013
28556443	QVSLQVITNAVCAR	100.00	0.013
28556443	QVSLQVITNAVCAR	100.00	0.013
28556443	QVSLQVITNAVCAR	100.00	0.013
28556443	QVSLQVITNAVCAR	100.00	0.013
28556443	QVSLQVITNAVCAR	100.00	0.013
28556443	QVSLQVITNAVCAR	100.00	0.013
28556443	QLIGITSFGSDR	100.00	0.013
28556443	QVSLQVITNAVCAR	100.00	0.013
28556443	QVSLQVITNAVCAR	100.00	0.013
28556443	QVSLQVITNAVCAR	100.00	0.013
28556443	QVSLQVITNAVCAR	100.00	0.013
28556443	QVSLQVITNAVCAR	100.00	0.013
28556443	QLIGITSFGSAQGCQR	100.00	0.013
28556443	QLIGITSFGSAQGCQR	100.00	0.013

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree