SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16670
Annotation
PREDICTED:_uncharacterized_protein_LOC100101190_isoform_X1_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 1.948
 

Sequence

CDS
ATGTTTGTGGTATCTCCTCATATACGCCAGGAATGGAAATGTATGGCTACTCTGATTGCAAGATTTTCAAATAAACCCACATCATCCGAGGTTCTAACAGCCTATTTAACTCAGTGTAACGAACCACCTTGGACTTCTTATTTTGTAAAGTACAGTTATGTGAAAGATGATCAGTTTGGAATGTCAAATTTTAATTGGAAGGTTGGTAATTCCAACTATCAAATATTAAGAACTGGTTGTTTTCCATATATAAAATATCACTGTTCTAGAAAAAAGGCAGAAGACTTAAATATGTCAGATAAATTTATGAGAATTATAAAGGTTGCAAATTTAGGTATACCTTGTTTACTGTATGGCCTTGCAGCAACCCAGCTTATAAGGCATGAAGAACTTGTTCACACAAGCAAAGGGCCAGTACCAATATACTTTTTGCTTCCAGAAGATAAAGGATCTTTGCATTAA
Protein
MFVVSPHIRQEWKCMATLIARFSNKPTSSEVLTAYLTQCNEPPWTSYFVKYSYVKDDQFGMSNFNWKVGNSNYQILRTGCFPYIKYHCSRKKAEDLNMSDKFMRIIKVANLGIPCLLYGLAATQLIRHEELVHTSKGPVPIYFLLPEDKGSLH

Summary

Similarity
Belongs to the complex I 49 kDa subunit family.
EMBL
NWSH01000683    PCG74813.1    ODYU01002932    SOQ41048.1    JTDY01001004    KOB75142.1    + More
AGBW02012778    OWR44460.1    KQ459984    KPJ18967.1    KQ459220    KPJ02847.1    RSAL01000293    RVE42876.1    GEZM01062046    JAV70091.1    GBYB01014251    JAG84018.1    KK107245    QOIP01000014    EZA54506.1    RLU14821.1    KQ982729    KYQ51577.1    NNAY01000071    OXU31279.1    KK853153    KDR10553.1    KQ981940    KYN32744.1    PYGN01000580    PSN43884.1    ADTU01020800    KQ976529    KYM81725.1    KQ971354    KYB26580.1    KQ978946    KYN27401.1    GL888334    EGI62585.1    NEVH01006756    PNF36448.1    GEDC01016555    GEDC01013341    JAS20743.1    JAS23957.1    GL453868    EFN75376.1    GDHF01028799    JAI23515.1    AAAB01008847    EAU77223.3    APCN01001005    GL440609    EFN65695.1    KQ434810    KZC06737.1    GBHO01031273    GBHO01011758    GBRD01004528    JAG12331.1    JAG31846.1    JAG61293.1    LJIJ01000099    ODN02685.1    AE014297    AAN13890.2    BT032967    ACD99531.1    GGFK01012948    MBW46269.1    KQ978231    KYM96163.1    GFXV01003063    MBW14868.1    ABLF02019454    GFWV01019829    MAA44557.1    AXCN02001373    DS232152    EDS36191.1    JW874163    AFP06680.1    ADMH02001172    ETN63842.1    AXCM01009391    GAMD01002975    JAA98615.1    ATLV01025101    KE525369    KFB52162.1    DS469534    EDO45650.1    JXJN01022584    GDAI01002339    JAI15264.1    GL732553    EFX79255.1    LNIX01000006    OXA52816.1    GDIQ01258686    JAJ93038.1    CH477759    EAT36539.1    GFPF01001272    MAA12418.1    KV946802    PIO25516.1    GANO01003121    JAB56750.1    AFYH01123882    CM012442    RVE71806.1    CAAE01014555    CAF98367.1    GEFM01001947    JAP73849.1    KQ042192    KKF18153.1    HADW01003211    HADX01006543    SBP04611.1    ABJB010944827    DS653188    EEC02648.1   
Pfam
PF15031   DUF4528        + More
PF00346   Complex1_49kDa
Interpro
IPR029245   DUF4528        + More
IPR022885   NDH1_su_D/H       
IPR001135   NADH_Q_OxRdtase_suD       
IPR014029   NADH_UbQ_OxRdtase_49kDa_CS       
IPR029014   NiFe-Hase_large       
IPR038290   NADH_Q_OxRdtase_suD_sf       
SUPFAM
SSF56762   SSF56762       
Gene 3D

Ontologies

Topology

Length:
153
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
7.71244
Exp number, first 60 AAs:
0.00145
Total prob of N-in:
0.42573
outside
1  -  153
 
 

Population Genetic Test Statistics

Pi
0
Theta
0
Tajima's D
0
CLR
0
CSRT
0
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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