Silkworm Genome Informatics Database

Gene

KWMTBOMO16668

Pre Gene Modal

BGIBMGA002210

Annotation

PREDICTED:_uncharacterized_protein_LOC101737771_isoform_X3_[Bombyx_mori]

Location

Bomo_Scaf082(-):1851-18615 View in EpiBrowser

Transcription factor

THAP

Location in the cell

Nuclear Reliability : 3.103

CDS

ATGCCTGATACTCATCGTACTTGTGAAGTTTGTGGTATCAAAGAAAGACATCTTACTGAAAAACGGTTTTTCGCAAGGTTTCCTCTGGATGTCAATAGATGTAAACAATGGGTAAAGATGGTTGGCAAAGAAGATCTGGCTTATCTTCAAGTACATATGCTACATGATTTAAAACATGTTTGTGAAGCACATTTCTCAAGACGAGACTTTACAAAATCAAAGAAGCGCTTAAAAAAACGAGCTGTACCCAAACTGAACTTGACACTGCCACCATTGAGAGATGAAATTCTTCTTCAATTTTTGCAACTCAACTCGCAAGCGGATGTCACCCCACAAGGCCAGTTCGAGGTTCAGGCCGTTCCTAGTGCTTTGATGCCAGCATCCTCAAGTCAGCCTAGCGGTCTAGAGAAAACTGATGTCACCCCACAAGGCCAGTTTGAGGTTCAGGCTGTTCCTTGTACTTCAATGCCAACATCCTCAAGTCAGTCTAGCAGTCTAGAGAAAAACGTCACCAAAGGAAGCCAGCGGAAAGAAAGTGAAAGTCAAATAAGAAAAAGAAAATTAGAAGATGTTGATGTTACACCACGGAAAAGGAAGCTCTTAAGTGAATTGAGAAAAACAAAGTGCACATTGGCATCATTAAAAAAGAGCGCGAAACTAATAGACAATTTATCGTCAGAGTTTCTAAAAGAAATTGTCACGTCTGCGTTGATAAATCAAAAGCGTAAGTCACAAGGCAAACGCTGGACTATTAAAAATAAAATATCAGCATTAGCCATCTTCAAGCGTTCACCAAAAGCTTACCGATATCTGCGATATCTCGCACCATTTCCGAGTATCAAAACATTGCAAAAATTAATGAAAAAAATACCTGTTGAGCCAGGTTTAAATACAGCTGTACTTGACCACCTGAAAAAACTAGCTCCCATTAAAAAAATAAGAGCAAAATTATGTTCGCTAGTCTTTGATGAAATAGCGTTAAAAGAAAGGTTAACTTATAGCGAAGCCACAGATAAAGTGGAAGGGTTTATCGATTATGGATATGAGAGGAAAGATGAGCTAGCAAATCATGCCTTAGTCTTCATGTTACAAGGTATTGGGAGAAAAATTAAACAACCGCTGGCATTCTATTTCATAAGAGGCACAGTATCTTCAGAAAAATTAGCAGTTTTAATAAAAGATATAATTAAAGAAATTACTAACTCGGGATTTCAAGTTTTATCAACAATATGTGATCAAGCGCCCACCAATATGGGAGCATTAAGTCTGTTAAAGGAGTGGAACAATGGTGGACATAATTATTTTGAATTTGAAAATAAAAAAATTTATATAATTTATGATATTCCACATTTATTAAAATCACTGAGAAATAACTTTTTAAAACAAGGATTTCTGAAAATGGGAGAATTGAAAGGTCAATGGAGCCATTTAGTTGAGGTAGAGGAACGAAATAGAAATTTTTTATATCTTAGCAAACTCAAATCAACTCATGTACAACCAAAGTACAGAGCTAAAATGAAAGTTAAGTATGCCGCACAAATATTTAGCCAAACAGTGGCTGCTGTTCTTAAATTATTAGCTACGAATGTGGAAAATGTACACCGATCAGATGAAATATTACAGACTGCTTTGTTAATTGAAAAATTCAATAAACTTTTTGATTATACAAATGGGCCATCAGGACATGCTGACGTAAAAAAAGGTATACGGGAAAACGTATCTGCTAAAACTGACCATTTAGCTGTTTGGACAGAATATAGAAAGCAACTGTCTACTTTAACATTTTTCAACCATAATGGCGTGGAAGCAAAAAATGTAAAGTGTGTTCAAGGCTACATTATATCATTAAAATCGCTGCGTGATATTTGGCTGGAAGTTCAGGATTTAGGATATAAGTATTTGAATCTACGGCAGTTAAACCAGGATGCATTAGAAAATTTATTTGGGTTAATAAGACAGCATGGTCAAACAAACAAGCATCCGACGTGTTCTACATTTATAGCAGCTATGAAAACCTCTATAATATCAGGACTTACCGCCCCTCACAGCAAAAACTCCAATTGTGAAGAAGACAAAAAGGAACTCATGACGGATTTTCATGATTTAGTTTTTGGGTTTAAAGACGAAGATGATCAAGGTCAAGATATTAATGAGTCTCCTAGTCATGTTTCCACAGAAAATGAAAATGAGGAAGACAACCCGGTTCTCAGTATACCTGAAGAAGAAGAATATAAAGAAATAATCACGAAGATGTCGTCACCGAGCGCTGGGAAACGACGCATGGACACCGATGTCATCAAACTTATCGAAAGCAAGCACGAAGTGACAATCCTGAGCGGCCTTAACGAGTTCTGCGTGAAATTCTTCGGACCTCCAGGAACGCCATACGAAGGTGGTGTGTGGAGAGTACGCGTGCACCTTCCCGATCATTACCCCTTCAAGTCTCCGTCCATCGGTTTCATGAATAAGGTCTACCACCCCAACATAGATGAGGTGTCGGGGACCGTGTGTCTTGACGTCATCAACCAGGCGTGGACTGCCCTTTATGACTTATCGAATATATTTGAATCGTTTCTGCCGCAACTGCTCACCTACCCGAACCGATCGACCGCTGAACGGTGA

Protein

MPDTHRTCEVCGIKERHLTEKRFFARFPLDVNRCKQWVKMVGKEDLAYLQVHMLHDLKHVCEAHFSRRDFTKSKKRLKKRAVPKLNLTLPPLRDEILLQFLQLNSQADVTPQGQFEVQAVPSALMPASSSQPSGLEKTDVTPQGQFEVQAVPCTSMPTSSSQSSSLEKNVTKGSQRKESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLSSEFLKEIVTSALINQKRKSQGKRWTIKNKISALAIFKRSPKAYRYLRYLAPFPSIKTLQKLMKKIPVEPGLNTAVLDHLKKLAPIKKIRAKLCSLVFDEIALKERLTYSEATDKVEGFIDYGYERKDELANHALVFMLQGIGRKIKQPLAFYFIRGTVSSEKLAVLIKDIIKEITNSGFQVLSTICDQAPTNMGALSLLKEWNNGGHNYFEFENKKIYIIYDIPHLLKSLRNNFLKQGFLKMGELKGQWSHLVEVEERNRNFLYLSKLKSTHVQPKYRAKMKVKYAAQIFSQTVAAVLKLLATNVENVHRSDEILQTALLIEKFNKLFDYTNGPSGHADVKKGIRENVSAKTDHLAVWTEYRKQLSTLTFFNHNGVEAKNVKCVQGYIISLKSLRDIWLEVQDLGYKYLNLRQLNQDALENLFGLIRQHGQTNKHPTCSTFIAAMKTSIISGLTAPHSKNSNCEEDKKELMTDFHDLVFGFKDEDDQGQDINESPSHVSTENENEEDNPVLSIPEEEEYKEIITKMSSPSAGKRRMDTDVIKLIESKHEVTILSGLNEFCVKFFGPPGTPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSNIFESFLPQLLTYPNRSTAER

Uniprot

A0A2P8ZAL9 A0A2A4JPP6 A0A2A4JYS8 A0A2A4JY71 J9M897 A0A2A4JZ58 + More
D2A039 J9M9N1 J9KEP3 J9M4P5 X1XB84 J9M6Y7 J9L7T1 J9M961 E9J9D7 A0A3S2L9N1

Pubmed

29403074 18362917 19820115 21282665

EMBL

PYGN01000122 PSN53542.1 NWSH01000959 PCG73380.1 NWSH01000363 PCG76969.1 + More
PCG76967.1 ABLF02019592 PCG76968.1 KQ971338 EFA01749.1 ABLF02017692 ABLF02017693 ABLF02017444 ABLF02008684 ABLF02008686 ABLF02008687 ABLF02011758 ABLF02011759 ABLF02034357 ABLF02017696 ABLF02011948 GL769271 EFZ10565.1 RSAL01000375 RVE42104.1

Proteomes

UP000245037 UP000218220 UP000007819 UP000007266 UP000283053

Pfam

PF05485   THAP        + More
PF12017   Tnp_P_element
PF14291   DUF4371

Interpro

IPR021896   Transposase_37        + More
IPR006612   THAP_Znf
IPR038441   THAP_Znf_sf
IPR025398   DUF4371

Gene 3D

3.30.40.180

ProteinModelPortal

A0A2P8ZAL9 A0A2A4JPP6 A0A2A4JYS8 A0A2A4JY71 J9M897 A0A2A4JZ58 + More
D2A039 J9M9N1 J9KEP3 J9M4P5 X1XB84 J9M6Y7 J9L7T1 J9M961 E9J9D7 A0A3S2L9N1

PDB

2Z5D E-value=4.75976e-59, Score=581

KEGG

101737771 K23209 DNA transposase THAP9 [EC:2.7.7.-] | (RefSeq) uncharacterized LOC101737771

GO

GO:0003677 GO:0004803 GO:0006313 GO:0043565 GO:0003676 GO:0006508 GO:0005975 GO:0046835 GO:0016773 GO:0006096 GO:0006281 GO:0006259

Length:

873

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00406

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00012

outside

1 - 873

Pi

0

Theta

0

Tajima's D

0

CLR

0.08604

CSRT

0

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree