Silkworm Genome Informatics Database

Gene

KWMTBOMO16662

Pre Gene Modal

BGIBMGA014594

Annotation

PREDICTED:_uncharacterized_protein_LOC101738420_isoform_X1_[Bombyx_mori]

Location

Bomo_Scaf078(+):17766-21571 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 2.004

CDS

ATGGGCATTGTCCAACTTGACCTCCTGTCTCTAATTTCACTTGTGGGCATTCGCGAATACAAAACCTGTTTTTTTTATTCACAGGCCGATCCTAACTTTCACGGCGCTCAGAAAGAATCTGCCTGGAAAATGTCTGCCGATAAACCTGAACTAAGAGCACTTCTCTTGGAAGCTATCGCCTTCGAAGACGGCTTCGAGAATAATAGTGTGAAATCTGAACCCGATGACGAAATCAAGTCTGAACCTGATGACGAGATCAAGTCTGAACCCGAGGACGATTACGATTCAGCTGATGAAGGCGAGGAGACAAGTGGCAGCACGGCACTAGACGGCATGGGCCAGTACTTGGGCGAGGTGAGCTCGCTACTGGACCGGTCGGGCAGCTGGCAGGAGCTAGCGGGCAGGCTGCGGCTCGACTCGCTGCTCTCCCTGTACTGCGCGCAGCCCAGCCCCACGCACACGCTGCTGCTGCATCTCAAGGAATACAATGAAATATCATCGAAATCGTTAGCATTCATCCTAGAAGATATGGGAGAGTTGGAAGCGGCTGAAGTTATAAGAAGATACGTTGAATAA

Protein

MGIVQLDLLSLISLVGIREYKTCFFYSQADPNFHGAQKESAWKMSADKPELRALLLEAIAFEDGFENNSVKSEPDDEIKSEPDDEIKSEPEDDYDSADEGEETSGSTALDGMGQYLGEVSSLLDRSGSWQELAGRLRLDSLLSLYCAQPSPTHTLLLHLKEYNEISSKSLAFILEDMGELEAAEVIRRYVE

Uniprot

H9JYH4 A7BJ65 A0A2A4IV30 A0A2H1W4C4 G3LF45 A0A194RSC1 + More
A0A194QHC6 A0A059XSW9 A0A345CI06 A0A059XNQ1 A0A212ESP0

Pubmed

19121390 17714806 26354079 22118469

EMBL

BABH01043755 AB298441 BAF74125.1 NWSH01007017 PCG63134.1 ODYU01006179 + More
SOQ47806.1 JN315690 AEO51739.1 KQ459984 KPJ18966.1 KQ459220 KPJ02846.1 KJ576789 AIA24468.1 MF797867 AXF67445.1 KJ576790 AIA24469.1 AGBW02012778 OWR44464.1

Proteomes

UP000005204 UP000218220 UP000053240 UP000053268 UP000007151

PRIDE

H9JYH4 A7BJ65

Pfam

PF00554   RHD_DNA_bind        + More
PF16179   RHD_dimer
PF12796   Ank_2
PF00023   Ank

Interpro

IPR011029   DEATH-like_dom_sf        + More
IPR032397   RHD_dimer
IPR036770   Ankyrin_rpt-contain_sf
IPR020683   Ankyrin_rpt-contain_dom
IPR037059   RHD_DNA_bind_dom_sf
IPR008967   p53-like_TF_DNA-bd
IPR002110   Ankyrin_rpt
IPR033926   IPT_NFkappaB
IPR013783   Ig-like_fold
IPR000451   NFkB/Dor
IPR011539   RHD_DNA_bind_dom
IPR014756   Ig_E-set
IPR002909   IPT_dom

SUPFAM

SSF47986   SSF47986        + More
SSF48403   SSF48403
SSF49417   SSF49417
SSF81296   SSF81296

Gene 3D

1.25.40.20 2.60.40.10 2.60.40.340

CDD

cd01177 IPT_NFkappaB
cd00204 ANK

ProteinModelPortal

H9JYH4 A7BJ65 A0A2A4IV30 A0A2H1W4C4 G3LF45 A0A194RSC1 + More
A0A194QHC6 A0A059XSW9 A0A345CI06 A0A059XNQ1 A0A212ESP0

KEGG

101738420 no KO assigned | (RefSeq) uncharacterized LOC101738420

GO

GO:0003700 GO:0005634 GO:0005737 GO:0003677

PANTHER

PTHR24169

Length:

191

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00282

Exp number, first 60 AAs:

0.00246

Total prob of N-in:

0.01836

outside

1 - 191

Pi

11.729823

Theta

13.092568

Tajima's D

-0.310632

CLR

0

CSRT

0.289035548222589

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree