Gene

KWMTBOMO16657

Annotation

PREDICTED:_transcription_factor_EB-like_[Bombyx_mori]

Location

Bomo_Scaf076(-):7177-9815      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.612

CDS

ATGATTGCTTTCTATATTTTGTGGTCTTCTGTCCCCGGGGCACTGTTCTGGATGCTGGAGTTTTTAATACACGGACACACGCACAAGTTGAATCGCAAAGCACCTGGAGAAACGCTTTCCGCAGTTGAATATAAAGTTGTTGTTTTCGTTTGTTCCAGCCCGCCTACGTTTAAGACCCTGACGCCCACATCTCGCACACAACTGAAGCAGCAGTTGATGCGAGAACATGCCCAGGAGCAGCTGCGAAGAGAATCACAAAACCAACAAGCTGGACAATCCAAAGACAATGAAGAGCATAAAAAGAAGTCCTCGCCGACGGAGGTGCCTAGGATTACGCCACACGTCGAATTACCGCCACAAGTCCTACAGGTCCGAACAGTTCTGGAGAACCCCACCAGGTATCACGTGATACAGAAGCAGAAGAGTCAGGTACGACAGTACCTCAGCGAGTCCTTCCAACCACACACACAGGTCAGTGAAGTTTGGTCGTTTTTTTAA

Protein

MIAFYILWSSVPGALFWMLEFLIHGHTHKLNRKAPGETLSAVEYKVVVFVCSSPPTFKTLTPTSRTQLKQQLMREHAQEQLRRESQNQQAGQSKDNEEHKKKSSPTEVPRITPHVELPPQVLQVRTVLENPTRYHVIQKQKSQVRQYLSESFQPHTQVSEVWSFF

Uniprot

A0A3S2TFY2   A0A2A4KA52   A0A2W1BFJ0   A0A194QJM4   A0A151IG74   A0A1B6D8D0   + More
A0A1B6CP76   A0A1B6CBE9   A0A1B6EA89   A0A1J1J5N2   A0A1J1J2K5   A0A1B6EHJ6   A0A0P8XYS8   A0A1B6IVF4   A0A1B6I793   A0A0P8XIE8   B3MZ93   A0A1B6KZF9   A0A1B6MU07   A0A1B6LBJ7   A0A0R1E7L8   C3KGP2   A0A026W1Q3   A0A0J9UT00   A0A0J9S308   B4IKS3   H9XVQ2   A0A2C9JTZ1   A0A1I8PF41  

Pubmed

28756777    26354079    17994087    17550304    10731132    12537568    + More
12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24508170    22936249    15562597   

EMBL

RSAL01000181    RVE44921.1    NWSH01000008    PCG80959.1    KZ150133    PZC73031.1    + More
KQ458671    KPJ05584.1    KQ977726    KYN00269.1    GEDC01015350    JAS21948.1    GEDC01022107    JAS15191.1    GEDC01026501    JAS10797.1    GEDC01002450    JAS34848.1    CVRI01000066    CRL06193.1    CRL06194.1    GECZ01032398    JAS37371.1    CH902633    KPU74661.1    GECU01016787    JAS90919.1    GECU01024922    JAS82784.1    KPU74662.1    EDV33698.1    GEBQ01023134    JAT16843.1    GEBQ01000592    JAT39385.1    GEBQ01019073    JAT20904.1    CM000161    KRK05013.1    BT082107    AE014135    ACQ45345.1    AFH06796.1    KK107488    EZA49958.1    CM002916    KMZ07416.1    KMZ07415.1    CH480855    EDW52663.1    AFH06797.1   

Proteomes

UP000283053    UP000218220    UP000053268    UP000078542    UP000183832    UP000007801    + More
UP000002282    UP000000803    UP000053097    UP000001292    UP000076420    UP000095300   

Pfam

PF15951   MITF_TFEB_C_3_N        + More
PF00010   HLH

Interpro

IPR031867   MiT/TFE_N        + More
IPR036638   HLH_DNA-bd_sf       
IPR011598   bHLH_dom       

SUPFAM

SSF47459   SSF47459       

Gene 3D

4.10.280.10    

CDD

cd00083  HLH

ProteinModelPortal

A0A3S2TFY2   A0A2A4KA52   A0A2W1BFJ0   A0A194QJM4   A0A151IG74   A0A1B6D8D0   + More
A0A1B6CP76   A0A1B6CBE9   A0A1B6EA89   A0A1J1J5N2   A0A1J1J2K5   A0A1B6EHJ6   A0A0P8XYS8   A0A1B6IVF4   A0A1B6I793   A0A0P8XIE8   B3MZ93   A0A1B6KZF9   A0A1B6MU07   A0A1B6LBJ7   A0A0R1E7L8   C3KGP2   A0A026W1Q3   A0A0J9UT00   A0A0J9S308   B4IKS3   H9XVQ2   A0A2C9JTZ1   A0A1I8PF41  

KEGG

101740924    no KO assigned | (RefSeq) transcription factor EB-like

GO

GO:0045893   GO:0046983   GO:0006959   GO:0045670   GO:0009267   GO:0007040   GO:0001745   GO:0016042   GO:0006355   GO:0043565   GO:1901098  

Length:

165

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

17.38139

Exp number, first 60 AAs:

17.37706

Total prob of N-in:

0.29400

POSSIBLE N-term signal

sequence

outside

1  -  3

TMhelix

4  -  23

inside

24  -  165

 

 

Pi

17.799747

Theta

19.341149

Tajima's D

-0.477632

CLR

0.009072

CSRT

0.252337383130843

Interpretation

Uncertain