Gene

KWMTBOMO16649

Pre Gene Modal

BGIBMGA002210

Annotation

PREDICTED:_uncharacterized_protein_LOC101737771_isoform_X3_[Bombyx_mori]

Location

Bomo_Scaf069(-):10529-17905      View in EpiBrowser

Transcription factor

THAP

Location in the cell

Nuclear   Reliability : 3.105

CDS

ATGCCTGATACTCATCGTACTTGTGAAGTTTGTGGTATCAAAGAAAGACATCTTACTGAAAAACGGTTTTTCGCAAGGTTTCCTCTGGATGTCAATAGATGTAAACAATGGGTAAAGATGGTTGGCAAAGAAGATCTGGCTTATCTTCAAGTACATATGCTACATGATTTAAAACATGTTTGTGAAGCACATTTCTCAAGACGAGACTTTACAAAATCAAAGAAGCGCTTAAAAAAACGAGCTGTACCCAAACTGAACTTGACACTGCCACCATTGAGAGATGAAATTCTTCTTCAATTTTTGCAACTCAACTCGCAAGCGGATGTCACCCCACAAGGCCAGTTCGAGGTTCAGGCCGTTCCTAGTGCTTTGATGCCAGCATCCTCAAGTCAGCCTAGCGGTCTAGAGAAAACTGATGTCACCCCACAAGGCCAGTTTGAGGTTCAGGCTGTTCCTTGTACTTCAATGCCAACATCCTCAAGTCAGTCTAGCAGTCTAGAGAAAAACGTCACCAAAGGAAGCCAGCGGAAAGAAAGTGAAAGTCAAATAAGAAAAAGAAAATTAGAAGATGTTGATGTTACACCACGGAAAAGGAAGCTCTTAAGTGAATTGAGAAAAACAAAGTGCACATTGGCATCATTAAAAAAGAGCGCGAAACTAATAGACAATTTATCGTCAGAGTTTCTAAAAGAAATTGTCACGTCTGCGTTGATAAATCAAAAGCGTAAGTCACAAGGCAAACGCTGGACTATTAAAAATAAAATATCAGCATTAGCCATCTTCAAGCGTTCACCAAAAGCTTACCGATATCTGCGATATCTCGCACCATTTCCGAGTATCAAAACATTGCAAAAATTAATGAAAAAAATACCTGTTGAGCCAGGTTTAAATACAGCTGTACTTGACCACCTGAAAAAACTAGCTCCCATTAAAAAAATAAGAGCAAAATTATGTTCGCTAGTCTTTGATGAAATAGCGTTAAAAGAAAGGTTAACTTATAGCGAAGCCACAGATAAAGTGGAAGGGTTTATCGATTATGGATATGAGAGGAAAGATGAGCTAGCAAATCATGCCTTAGTCTTCATGTTACAAGGTATTGGGAGAAAAATTAAACAACCGCTGGCATTCTATTTCATAAGAGGCACAGTATCTTCAGAAAAATTAGCAGTTTTAATAAAAGATATAATTAAAGAAATTACTAACTCGGGATTTCAAGTTTTATCAACAATATGTGATCAAGCGCCCACCAATATGGGAGCATTAAGTCTGTTAAAGGAGTGGAACAATGGTGGACATAATTATTTTGAATTTGAAAATAAAAAAATTTATATAATTTATGATATTCCACATTTATTAAAATCACTGAGAAATAACTTTTTAAAACAAGGATTTCTGAAAATGGGAGAATTGAAAGGTCAATGGAGCCATTTAGTTGAGGTAGAGGAACGAAATAGAAATTTTTTATATCTTAGCAAACTCAAATCAACTCATGTACAACCAAAGTACAGAGCTAAAATGAAAGTTAAGTATGCCGCACAAATATTTAGCCAAACAGTGGCTGCTGTTCTTAAATTATTAGCTACGAATGTGGAAAATGTACACCGATCAGATGAAATATTACAGACTGCTTTGTTAATTGAAAAATTCAATAAACTTTTTGATTATACAAATGGGCCATCAGGACATGCTGACGTAAAAAAAGGTATACGGGAAAACGTATCTGCTAAAACTGACCATTTAGCTGTTTGGACAGAATATAGAAAGCAACTGTCTACTTTAACATTTTTCAACCATAATGGCGTGGAAGCAAAAAATGTAAAGTGTGTTCAAGGCTACATTATATCATTAAAATCGCTGCGTGATATTTGGCTGGAAGTTCAGGATTTAGGATATAAGTATTTGAATCTACGGCAGTTAAACCAGGATGCATTAGAAAATTTATTTGGGTTAATAAGACAGCATGGTCAAACAAACAAGCATCCGACGTGTTCTACATTTATAGCAGCTATGAAAACCTCTATAATATCAGGACTTACCGCCCCTCACAGCAAAAACTCCAATTGTGAAGAAGACAAAAAGGAACTCATGACGGATTTTCATGATTTAGTTTTTGGGTTTAAAGACGAAGATGATCAAGGTCAAGATATTAATGAGTCTCCTAGTCATGTTTCCACAGAAAATGAAAATGAGGAAGACAACCCGGTTCTCAGTATACCTGAAGAAGAAGAATATAAAGAAATAGTATGTGACCTAGCAAAAATTTCAAATCAACCAGTGGTCTATATAAGTGGATATCTAGCTTCTGTTATTCTAAAAAAAAATGATTGCCAGGTCTGTAGAGAAACTTTGACAGTTGCAGATCCAGAGGAAAATAAGATTTATGATTTAATTAAATTAAGGGAGTGGTGGCAAGATAAGAAATGTTTGACATATCCATCATTGCAGTTGTGTCAAACTGTACACACTGCGGTTACAAATTTTGAACAGTTTTGACTGAGCCTCTCAAGTTTGAAGAAGCATAAGGCTTTGATCCCTCTGTATGTATGTGTGGGGATAGGATGTGGTGGAGCTGTGTTCTATACTCTGCGTCTGGCTTTGCGTAATCCTGATGTATCTTGGAACAAGAAGACCAACCCTGAACCATGGGAGGCTTACAGGAACAAGCAGTACAAGTTCTATTCTCCCATCAGAGACTACTCTAAGGAGGAATCTCCTGCCCCCAAATACTAA

Protein

MPDTHRTCEVCGIKERHLTEKRFFARFPLDVNRCKQWVKMVGKEDLAYLQVHMLHDLKHVCEAHFSRRDFTKSKKRLKKRAVPKLNLTLPPLRDEILLQFLQLNSQADVTPQGQFEVQAVPSALMPASSSQPSGLEKTDVTPQGQFEVQAVPCTSMPTSSSQSSSLEKNVTKGSQRKESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLSSEFLKEIVTSALINQKRKSQGKRWTIKNKISALAIFKRSPKAYRYLRYLAPFPSIKTLQKLMKKIPVEPGLNTAVLDHLKKLAPIKKIRAKLCSLVFDEIALKERLTYSEATDKVEGFIDYGYERKDELANHALVFMLQGIGRKIKQPLAFYFIRGTVSSEKLAVLIKDIIKEITNSGFQVLSTICDQAPTNMGALSLLKEWNNGGHNYFEFENKKIYIIYDIPHLLKSLRNNFLKQGFLKMGELKGQWSHLVEVEERNRNFLYLSKLKSTHVQPKYRAKMKVKYAAQIFSQTVAAVLKLLATNVENVHRSDEILQTALLIEKFNKLFDYTNGPSGHADVKKGIRENVSAKTDHLAVWTEYRKQLSTLTFFNHNGVEAKNVKCVQGYIISLKSLRDIWLEVQDLGYKYLNLRQLNQDALENLFGLIRQHGQTNKHPTCSTFIAAMKTSIISGLTAPHSKNSNCEEDKKELMTDFHDLVFGFKDEDDQGQDINESPSHVSTENENEEDNPVLSIPEEEEYKEIVCDLAKISNQPVVYISGYLASVILKKNDCQVCRETLTVADPEENKIYDLIKLREWWQDKKCLTYPSLQLCQTVHTAVTNFEQFXLSLSSLKKHKALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAYRNKQYKFYSPIRDYSKEESPAPKY

Uniprot

A0A3S2LWQ8   A0A2P8ZAL9   A0A2A4JPP6   D2A039   A0A2A4JYS8   A0A2A4JY71   + More
X1XTB8   A0A2A4JZ58   J9L862   J9M897   X1XB84   J9KEF2   J9M9N1   J9M4P5   J9KEP3   J9L7T1   A0A1Y1NHP2   A0A1Y1NHU8   J9M6Y7   J9M961   E9J9D7   A0A1Y1JZB1   A0A3S2L9N1   J9LX62   J9KX16   A0A1Y1KN14   A0A1Y1KI01   A0A3S2KX83   A0A3S2NSI9   A0A1Y1KQA9   A0A2A4J5S8   D6WAY8   A0A1Y1M1P6   A0A1Y1LXN5   A0A1Y1LXG7   A0A2S2QDL5   A0A1Y1M4V8   A0A1Y1LXH5   A0A1E1WCZ7   A0A267DNP6  

Pubmed

29403074    18362917    19820115    28004739    21282665   

EMBL

RSAL01000151    RVE45747.1    PYGN01000122    PSN53542.1    NWSH01000959    PCG73380.1    + More
KQ971338    EFA01749.1    NWSH01000363    PCG76969.1    PCG76967.1    ABLF02063349    PCG76968.1    ABLF02003317    ABLF02019592    ABLF02011758    ABLF02011759    ABLF02028679    ABLF02056730    ABLF02017692    ABLF02017693    ABLF02008684    ABLF02008686    ABLF02008687    ABLF02017444    ABLF02017696    GEZM01001982    JAV97423.1    GEZM01001983    JAV97421.1    ABLF02034357    ABLF02011948    GL769271    EFZ10565.1    GEZM01101736    JAV52346.1    RSAL01000375    RVE42104.1    ABLF02019656    ABLF02019662    ABLF02041486    ABLF02023911    GEZM01085095    JAV60237.1    GEZM01085094    JAV60238.1    RSAL01002057    RVE40596.1    RSAL01000257    RVE43416.1    GEZM01083633    JAV61067.1    NWSH01002950    PCG67239.1    KQ971312    EEZ97927.2    GEZM01044403    JAV78255.1    GEZM01044400    JAV78259.1    GEZM01044404    GEZM01044402    JAV78253.1    GGMS01006397    MBY75600.1    GEZM01044401    JAV78257.1    GEZM01044405    JAV78252.1    GDQN01006225    JAT84829.1    NIVC01003697    PAA50189.1   

Proteomes

UP000283053    UP000245037    UP000218220    UP000007266    UP000007819    UP000215902    + More

Pfam

PF12017   Tnp_P_element        + More
PF05485   THAP
PF14291   DUF4371
PF03564   DUF1759
PF04727   ELMO_CED12
PF05585   DUF1758

Interpro

IPR006612   THAP_Znf        + More
IPR021896   Transposase_37       
IPR038441   THAP_Znf_sf       
IPR025398   DUF4371       
IPR006816   ELMO_dom       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR021109   Peptidase_aspartic_dom_sf       
IPR008737   Peptidase_asp_put       
IPR005312   DUF1759       

SUPFAM

SSF57756   SSF57756       

Gene 3D

3.30.40.180     2.40.70.10    

ProteinModelPortal

A0A3S2LWQ8   A0A2P8ZAL9   A0A2A4JPP6   D2A039   A0A2A4JYS8   A0A2A4JY71   + More
X1XTB8   A0A2A4JZ58   J9L862   J9M897   X1XB84   J9KEF2   J9M9N1   J9M4P5   J9KEP3   J9L7T1   A0A1Y1NHP2   A0A1Y1NHU8   J9M6Y7   J9M961   E9J9D7   A0A1Y1JZB1   A0A3S2L9N1   J9LX62   J9KX16   A0A1Y1KN14   A0A1Y1KI01   A0A3S2KX83   A0A3S2NSI9   A0A1Y1KQA9   A0A2A4J5S8   D6WAY8   A0A1Y1M1P6   A0A1Y1LXN5   A0A1Y1LXG7   A0A2S2QDL5   A0A1Y1M4V8   A0A1Y1LXH5   A0A1E1WCZ7   A0A267DNP6  

PDB

5Z62     E-value=1.85724e-12,     Score=179

KEGG

101737771    K23209 DNA transposase THAP9 [EC:2.7.7.-] | (RefSeq) uncharacterized LOC101737771

GO

GO:0003677   GO:0004803   GO:0006313   GO:0043565   GO:0003676   GO:0016021   GO:0005536   GO:0005975   GO:0046835   GO:0016773   GO:0006096   GO:0006281   GO:0006259  

Length:

909

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

21.90419

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00031

outside

1  -  843

TMhelix

844  -  866

inside

867  -  909

 

 

Pi

0

Theta

0

Tajima's D

0

CLR

0.019225

CSRT

0

Interpretation

Uncertain