Gene

KWMTBOMO16636  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004605

Annotation

heat_shock_protein_hsp20.8_[Bombyx_mori]

Location

Bomo_Scaf060(-):18371-19115      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.425 Extracellular   Reliability : 1.197 Mitochondrial   Reliability : 1.079

CDS

ATGTCTCTTCTACCATTCGTGTTGGGTGACTGGCCCCGCGTTCGTCACAACCACTGGCCCAGTCGTCTTGTTGATCAAGATTTTGGATTGGCGCTAACCCCGAACGACATGCTGGCTGCCGTCGCCTGTCCAGTGCTCTCCGAAGACTACTTCAGACCATGGAGACAACTCGCGGCTGCATCTCGTGACCTCGGTTCCAGCATAAAGGCCGACAAGGACAAGTTCCAAGTCAATCTGGACGTGCAGCACTTCTCGCCGGAAGAGATTTCGGTGAAGACTGCCGATGGGTACATCGTGGTGGAAGGCAAGCACGAAGAGAAGAAAGACGAGCACGGGTATATTTCAAGGCAGTTCGTCCGACGTTACGCGCTGCCTGAAGGCGCGGCGCCTGAGACTGTGGAATCGCGACTGTCATCAGACGGGGTTCTCACCATCACCGCGCCGAGGAAGGTACCCGACGCCGTCAAGGGAGAGCGAAAGGTGCCCATCGCACAGACCGGTCCCGTTCGCAAGGAGATCAAGGACCAGAGCGAGGGAACCCAGGATGCCGAAAATAAGTAG

Protein

MSLLPFVLGDWPRVRHNHWPSRLVDQDFGLALTPNDMLAAVACPVLSEDYFRPWRQLAAASRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVEGKHEEKKDEHGYISRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTGPVRKEIKDQSEGTQDAENK

Similarity

Belongs to the small heat shock protein (HSP20) family.

Uniprot

A0A0C5PKY8   Q9GN07   A0A0P0CJ81   A0A2A4J9J4   A0A343EU23   A0A2H4LHL7   + More
E2F397   O18634   A0A0K0XQX1   A0A2H1W2W7   A0A2W1BHM1   Q9GSB6   A0A2A4J9F7   A0A0N1INR0   E2F399   A0A2H1W1Y8   A0A0A7BZF0   A0A0A7BZ27   Q1HAT5   A0A212EIS5   M1FKQ7   A0A0A7RE39   A0A0N0PBJ9   R9S0D1   I4DMV4   Q2LCS7   A0A161GJ22   A0A3S2L9M7   A0A194QB65   A0A0A7BZM3   A0A3S2PJT0   A0A222NUK8   B9VTS8   A0A385PHG6   A0A2A4J3F8   S4P4G2   A0A220W0C8   Q5MGN8   Q5R1P7   A0A2H4LI82   Q0KKB1   A0A194Q5N9   E2F3A1   A0A0N1PFQ5   A0A2H1X0S0   F1C928   R4HL93   Q1AMF5   R9RZX9   A0A222NUL2   A0A212F0A4   A0A0K0XQY0   Q5MGL1   A0A212FJB9   A0A0A7RCH5   A0A0A7RCE5   A0A212ERQ7   A0A212FIM4   Q5R1P6   B9VTS0   A0A2D1CRQ9   A0A0L7K2K7   B2ZHW3   A0A0L7L9D3   A0A1E1W5U5   D9J2L8   A0A194Q6N8   S4NMP5   A0A212EIS8   Q1AMF7   A0A222NUL9   A0A2H1W170   A0A2A4JK93   A0A0A7BZ70   A0A2D1CRP7   A0A2A4JLW2   A0A2H1WH29   E2F398   A0A2A4JUN7   A0A075BR54   A0A345W859   A0A2W1BH28   Q5R1P4   A0A2H1WKW0   H9J4S5   A0A2A4K9P8   A0A0N0PBK3   H9J540   A0A194PVM7   A0A0K0XR10   F1C929   Q1AMF6   A0A0L7L8L1   Q0KKB2   A0A222NUM2   A0A222NUL6   A0A0K0XR46   A0A194Q6X9   A0A2W1BPZ5   A0A222NUK4  

Pubmed

25527122    17031055    28756777    21510953    9654738    26196395    + More
19121390    26354079    24947609    22118469    23763950    25514417    22651552    18804477    28755305    23622113    28687981    16023793    17630658    26227816   

EMBL

KM881570    AJQ22645.1    AF315317    AF315319    FJ602772    AAG30944.1    + More
AAG30946.1    ACM24338.1    KR137569    ALI87024.1    NWSH01002265    PCG68755.1    MF067296    ASM61894.1    KX845562    KZ150055    ATB54993.1    PZC74337.1    HM046613    ADK55520.1    U94328    AAC36146.1    KP843896    AKS40075.1    ODYU01005718    SOQ46844.1    PZC74338.1    BABH01025846    AF315318    AAG30945.2    PCG68757.1    KQ460891    KPJ10837.1    HM046615    ADK55522.1    SOQ46842.1    KJ461916    AHW45918.1    KJ461920    AHW45922.1    JX491641    KC710020    AB244517    AGC23337.1    AGM90553.1    BAE94664.1    AGBW02014566    OWR41396.1    JQ708200    AFQ02692.1    KM217077    KM217078    AJA32865.1    KPJ10841.1    KC710018    KC710022    AGM90551.1    AGM90555.1    AK402622    BAM19244.1    DQ336356    ABC68342.2    KU096844    AMY63177.1    RSAL01000078    RVE48718.1    KQ459460    KPJ00666.1    KJ461917    AHW45919.1    RSAL01000012    RVE53492.1    KX958476    ASQ43192.1    FJ602788    ACM24354.1    MG816464    AYA93248.1    NWSH01003339    PCG66520.1    PCG66521.1    GAIX01009047    JAA83513.1    KY701309    ASK86231.1    AY829748    AAV91362.1    AB195970    BAD74195.1    KX845559    ATB54990.1    PZC74333.1    AB251898    BAF03558.1    KPJ00669.1    HM046617    ADK55524.1    KPJ10838.1    ODYU01012514    SOQ58867.1    HQ219475    ADX96000.1    HQ647012    AET10424.1    DQ063591    AAZ14792.1    KC710019    KC710024    AGM90552.1    AGM90557.1    RVE53491.1    KX958479    ASQ43195.1    AGBW02011158    OWR47131.1    KP843906    AKS40085.1    AY829747    AY829775    AAV91361.1    AAV91389.1    AGBW02008280    OWR53838.1    KM217079    AJA32867.1    KM217080    AJA32868.1    AGBW02012988    OWR44131.1    AGBW02008361    OWR53574.1    AB195971    BAD74196.1    FJ602780    ACM24346.1    KX977584    ATN45243.1    JTDY01014370    KOB52036.1    EU668902    ACD01216.1    JTDY01002160    KOB71979.1    GDQN01008714    JAT82340.1    HM359007    ADI48314.1    KPJ00670.1    GAIX01014246    JAA78314.1    OWR41397.1    DQ063589    AAZ14790.1    KX958482    ASQ43198.1    SOQ46845.1    NWSH01001148    PCG72391.1    KJ461913    AHW45915.1    KX977585    ATN45244.1    PCG72390.1    ODYU01008627    SOQ52368.1    HM046614    ADK55521.1    NWSH01000548    PCG75721.1    KC689795    KX845561    KZ150027    AGQ42773.1    ATB54992.1    PZC74791.1    MH042022    AXJ21597.1    KZ150133    PZC73025.1    AB195973    BAD74198.1    ODYU01009326    SOQ53668.1    BABH01035507    NWSH01000008    PCG80951.1    KQ460970    KPJ10176.1    BABH01042227    KQ459597    KPI95180.1    KP843907    AKS40086.1    HQ219476    ADX96001.1    DQ063590    AAZ14791.1    JTDY01002346    KOB71621.1    AB251897    BAF03557.1    KX958478    ASQ43194.1    KX958480    ASQ43196.1    KP843898    AKS40077.1    KPJ00755.1    PZC74790.1    KX958471    ASQ43187.1   

Proteomes

UP000218220    UP000005204    UP000053240    UP000007151    UP000283053    UP000053268    + More
UP000037510   

PRIDE

Q9GN07    Q9GSB6    B9VTS8    Q5R1P7    Q5R1P6    B9VTS0    + More
Q5R1P4    H9J4S5    H9J540   

Pfam

PF00011   HSP20

Interpro

IPR002068   A-crystallin/Hsp20_dom        + More
IPR001436   Alpha-crystallin/HSP       
IPR008978   HSP20-like_chaperone       
IPR036116   FN3_sf       
IPR003961   FN3_dom       

SUPFAM

SSF49764   SSF49764        + More
SSF49265   SSF49265       

Gene 3D

2.60.40.790    

CDD

cd00063  FN3

ProteinModelPortal

A0A0C5PKY8   Q9GN07   A0A0P0CJ81   A0A2A4J9J4   A0A343EU23   A0A2H4LHL7   + More
E2F397   O18634   A0A0K0XQX1   A0A2H1W2W7   A0A2W1BHM1   Q9GSB6   A0A2A4J9F7   A0A0N1INR0   E2F399   A0A2H1W1Y8   A0A0A7BZF0   A0A0A7BZ27   Q1HAT5   A0A212EIS5   M1FKQ7   A0A0A7RE39   A0A0N0PBJ9   R9S0D1   I4DMV4   Q2LCS7   A0A161GJ22   A0A3S2L9M7   A0A194QB65   A0A0A7BZM3   A0A3S2PJT0   A0A222NUK8   B9VTS8   A0A385PHG6   A0A2A4J3F8   S4P4G2   A0A220W0C8   Q5MGN8   Q5R1P7   A0A2H4LI82   Q0KKB1   A0A194Q5N9   E2F3A1   A0A0N1PFQ5   A0A2H1X0S0   F1C928   R4HL93   Q1AMF5   R9RZX9   A0A222NUL2   A0A212F0A4   A0A0K0XQY0   Q5MGL1   A0A212FJB9   A0A0A7RCH5   A0A0A7RCE5   A0A212ERQ7   A0A212FIM4   Q5R1P6   B9VTS0   A0A2D1CRQ9   A0A0L7K2K7   B2ZHW3   A0A0L7L9D3   A0A1E1W5U5   D9J2L8   A0A194Q6N8   S4NMP5   A0A212EIS8   Q1AMF7   A0A222NUL9   A0A2H1W170   A0A2A4JK93   A0A0A7BZ70   A0A2D1CRP7   A0A2A4JLW2   A0A2H1WH29   E2F398   A0A2A4JUN7   A0A075BR54   A0A345W859   A0A2W1BH28   Q5R1P4   A0A2H1WKW0   H9J4S5   A0A2A4K9P8   A0A0N0PBK3   H9J540   A0A194PVM7   A0A0K0XR10   F1C929   Q1AMF6   A0A0L7L8L1   Q0KKB2   A0A222NUM2   A0A222NUL6   A0A0K0XR46   A0A194Q6X9   A0A2W1BPZ5   A0A222NUK4  

PDB

3J07     E-value=6.57472e-20,     Score=235

KEGG

778499    K09542 crystallin, alpha B | (RefSeq) Hsp20.8, hsp; heat shock protein hsp20.8

PATHWAY

04141    Protein processing in endoplasmic reticulum - Bombyx mori (domestic silkworm)
04213    Longevity regulating pathway - multiple species - Bombyx mori (domestic silkworm)

GO

GO:0046872   GO:0005840   GO:0016021  

Length:

186

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01411

Exp number, first 60 AAs:

0.01411

Total prob of N-in:

0.00551

outside

1  -  186

 

 

Pi

0

Theta

0

Tajima's D

0

CLR

0.225623

CSRT

0

Interpretation

Uncertain