SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16631
Annotation
PREDICTED:_uncharacterized_protein_LOC101743572_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 2.266 PlasmaMembrane   Reliability : 2.072
 

Sequence

CDS
ATGACCTTCTACCAGCACATATTCAATGGTTGTTACGCCGTTCTACTCTTCATCGTTGTCGTGTTCTTCCTCATCTACGGTGTAGAAGTATTCTTTAAGCTCCGCGGTGAGTTCCTGAAGGAGACCAAAGTATGCACCATAATATCGCCCCGTCCCGGAACCTCAGCCGACGGAGATGAAGCCCAGGATACGCTTGTCACTAAACAGGGAATTCAAACGGATTTGCTGGACGGAGACGGAACGGTGGACCCTCGGTCCGTGGACCTCTCGCAGCTGCACCAGTCGCGCGTGGGCCTGATCAGCCTCGCGCTGATGCTCATACTGATCGTCTGCTTCCTGGCTTCTGAAACCCTAAGCGAATTCTGGAAGACTAAAAAAAATCCAACTCAAAAATAG
Protein
MTFYQHIFNGCYAVLLFIVVVFFLIYGVEVFFKLRGEFLKETKVCTIISPRPGTSADGDEAQDTLVTKQGIQTDLLDGDGTVDPRSVDLSQLHQSRVGLISLALMLILIVCFLASETLSEFWKTKKNPTQK

Summary

EMBL
GDQN01011454    JAT79600.1    NWSH01002568    PCG67959.1    KQ461181    KPJ07749.1    + More
RSAL01000042    RVE50782.1    KQ459053    KPJ04206.1    JTDY01001123    KOB74807.1    NEVH01012083    PNF30927.1    PNF30922.1    GL435242    EFN73588.1    GL443736    EFN61716.1    KK107168    QOIP01000001    EZA56197.1    RLU26724.1    KK853083    KDR11659.1    KQ976914    KYN07095.1    GL450151    EFN81455.1    KQ979074    KYN23015.1    GL888440    EGI60795.1    KQ976692    KYM77725.1    ADTU01003275    ADTU01003276    NNAY01002716    OXU20712.1    KQ982851    KYQ49862.1    KQ435750    KOX76311.1    KQ766333    OAD53704.1    KZ288254    PBC30726.1    JR050389    AEY61263.1    GALX01003922    JAB64544.1    DS235200    EEB13186.1    KQ971352    EFA06336.1    KB632372    ERL93751.1    APGK01054741    APGK01054742    APGK01054743    APGK01054744    APGK01054745    APGK01054746    APGK01054747    KB741253    ENN71778.1    LJIG01016164    KRT81422.1    GEZM01097310    JAV54277.1    GDIQ01226398    JAK25327.1    GDIP01081049    JAM22666.1    GDIQ01014549    JAN80188.1    GDIQ01227898    JAK23827.1    GDIQ01245850    GDIQ01209105    GDIQ01209104    GDIQ01191544    GDIQ01187615    GDIQ01166811    GDIQ01166810    GDIQ01149577    GDIQ01085806    JAN08931.1    GDIP01012624    JAM91091.1    GDIQ01227899    JAK23826.1    GDIP01116333    JAL87381.1    GBYB01005569    JAG75336.1    LRGB01000868    KZS15587.1    GBYB01006077    JAG75844.1    GDHF01030815    JAI21499.1    CH954177    EDV57542.1    KQS70014.1    KQS70015.1    KA644795    AFP59424.1    KA646225    AFP60854.1    CCAG010011257    JXJN01017179    GBXI01013344    GBXI01003451    GBXI01001890    JAD00948.1    JAD10841.1    JAD12402.1    GDHF01026922    GDHF01025277    JAI25392.1    JAI27037.1    CH916368    EDW03095.1    GBXI01001802    JAD12490.1    JRES01001649    KNC21163.1    CP012523    ALC40001.1    CH963920    EDW77935.1    GECU01035453    JAS72253.1    CH479189    EDW25666.1    CH379061    EAL33219.1    KRT04816.1    KRT04817.1    GECU01007400    JAT00307.1    GDAI01000518    JAI17085.1    OUUW01000006    SPP82397.1    GL732525    EFX88912.1    GAMC01013674    GAMC01013672    JAB92883.1    CM000157    EDW87457.1    KRJ97161.1    KRJ97162.1    CH902620    EDV30698.1    KPU72993.1    KPU72994.1    CH480820    EDW54066.1    CM000361    CM002910    EDX03539.1    KMY87764.1    AE014134    BT006012    AAF51189.1    AAO74695.1    KQ981958    KYN32005.1    CH940654    KRF77978.1    GFDF01004726    JAV09358.1    GEDC01027495    JAS09803.1    GECZ01022283    GECZ01009377    JAS47486.1    JAS60392.1    LNIX01000017    OXA45673.1    EDW57854.1    KRF77977.1    KRF77979.1    GEDC01003115    JAS34183.1    GFDF01004725    JAV09359.1    GEBQ01027714    GEBQ01011128    JAT12263.1    JAT28849.1    AJWK01026545    CH933807    EDW12222.1    KRG03157.1    GECL01002072    JAP04052.1    GBHO01017310    JAG26294.1    GFTR01007031    JAW09395.1    UFQT01000101    SSX19993.1    GBHO01011363    GBRD01003907    GDHC01015330    JAG32241.1    JAG61914.1    JAQ03299.1    ACPB03011978    GANO01004053    JAB55818.1    CVRI01000014    CRK89797.1    CAQQ02153271    CAQQ02153272    GAPW01000933    JAC12665.1   
Pfam
PF12906   RINGv        + More
PF18720   EGF_Tenascin
PF06454   DUF1084
PF07974   EGF_2
Interpro
IPR013083   Znf_RING/FYVE/PHD        + More
IPR011016   Znf_RING-CH       
IPR041161   EGF_Tenascin       
IPR009457   DUF1084       
IPR013111   EGF_extracell       
IPR008979   Galactose-bd-like_sf       
IPR013032   EGF-like_CS       
IPR036526   C-N_Hydrolase_sf       
IPR003010   C-N_Hydrolase       
SUPFAM
SSF56317   SSF56317       
Gene 3D

Ontologies

Topology

Length:
131
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
43.29873
Exp number, first 60 AAs:
21.71639
Total prob of N-in:
0.86353
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  29
outside
30  -  96
TMhelix
97  -  119
inside
120  -  131
 
 

Population Genetic Test Statistics

Pi
0
Theta
0
Tajima's D
0
CLR
0
CSRT
0
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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