SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16601
Annotation
PREDICTED:_uncharacterized_protein_LOC101744110_isoform_X5_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 1.938
 

Sequence

CDS
ATGACGCGTTGTTTTGTACCAATATGCTCAGAAATTGGAGTACATCAATTCCCGAAGGACAAGAAAATTAGAAGACTGTGTAAATACACAGGTGTCAAACATTATCATAAATATCTGAAGAAAGGTGCTGTACCATCTATATTTTCATGGAATATGAAACCAGTTTCTGAAGAAACAAAAAGTACAGAAGTTACTAGAAGTAATATTAGAGAAGGAATTGTCAATAAAAATAATTAA
Protein
MTRCFVPICSEIGVHQFPKDKKIRRLCKYTGVKHYHKYLKKGAVPSIFSWNMKPVSEETKSTEVTRSNIREGIVNKNN

Summary

Pfam
PF05485   THAP        + More
PF13613   HTH_Tnp_4
Interpro
IPR027805   Transposase_HTH_dom        + More
IPR038441   THAP_Znf_sf       
IPR006612   THAP_Znf       
IPR013087   Znf_C2H2_type       
IPR026516   THAP1       
Gene 3D

Ontologies

Topology

Length:
78
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00019
Exp number, first 60 AAs:
0.00019
Total prob of N-in:
0.35148
outside
1  -  78
 
 

Population Genetic Test Statistics

Pi
1.591939
Theta
6.168532
Tajima's D
-2.06679
CLR
1.367988
CSRT
0.00699965001749913
Interpretation
Uncertain
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