Gene

KWMTBOMO16597

Pre Gene Modal

BGIBMGA003341

Annotation

PREDICTED:_zinc_finger_protein_16-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Scaf030(-):7408-8005      View in EpiBrowser

Full name

Zinc finger protein      

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 2.591

CDS

ATGTATATATGTACATTTATTTGTGAGGAATGCGGCGCATCATTTAGCAGCAAACCGGCTCTTCGAACTCACTTGAAGATTCACAGACCTGAATCGGAGAGGCGATACAAGTGCAGCGTTAATGGATGTCGTAAGACTTTCAATTTTCCACATCATTTAAAGCACCATGAGCTGACGCACAAAAATGAGAAGCCGCACTTCTGTAGTATATGCGGGAAAGGTAAGTTTCGCAAAGCTGGCGATAACTTCAGGCCAAAATATTCATGCCCAGGTTAA

Protein

MYICTFICEECGASFSSKPALRTHLKIHRPESERRYKCSVNGCRKTFNFPHHLKHHELTHKNEKPHFCSICGKGKFRKAGDNFRPKYSCPG

Uniprot

H9J1F4   A0A2H1V2Z1   A0A2A4KAD4   A0A212FCK1   A0A194PLF6   A0A194RJP3   + More
S4NTR6   A0A2C9JH10   A0A3S1HQL0   A0A2P6KL77   A0A1J1HRI3   A0A0B7ASR0   Q16XR1   B0WUZ5   A0A167DS55   A0A1B0G6F1   A0A1B0G298   A0A1A9Z518   A0A1A9VNX6   A0A1A9YHC6   A0A1B0C3P8   A0A087UEA4   A0A3P8U4N7   A0A1S3RCS4   A0A1S3SLL5   G3WE46   A0A2P8YCW6   A0A0L8GER1   A0A210PT42   A0A2P8XY76   A0A2T7NJP4   A0A0B6Z4P7   A0A1Q3F1Q7   A0A0S7JXY4   F6YVT7   A0A0S7JZN2   A0A3P8WSG8   A0A0B6Y3F7   A0A3Q1D559   A0A2P6JZ71   F1R9K4   A0A1I8GDJ5   A0A1I8HD30   W5NPT0   A0A3P8Y934   S4RB94   A8DZB2   A0A2Y9HHP3   A0A2G9RSF5   A0A0R4IIB2   A0A3Q7NMW9   A0A3N0Z916   G1NVX4   F1MJ44   A0A183HXJ4   A0A3P8WQF2   A0A3Q4G6W5   A0A2P6K457   K9ITQ9   A0A2U3YCL5   A0A087TIY8   A0A2U3W4D3   A0A267FF26   A0A267DTM9   A8KB37   A0A0S7J1P4   A0A3B3XXG5   W5KKT1   A0A1B6DPD0   A0A267FGJ1   A0A3Q4G6X9   A0A2P6K075   W4YVQ9   A0A1I8JC41   A0A2Y9PSH1   A0A3B5AGL9   A0A3B1IX75   A0A1S3MVV0   A0A3B4DIH5   A0A3P8XSU9   A0A341BSL8   A0A1S3N0J5   A0A3Q1CKR2   A0A3Q3D244   A0A341BU25   A0A2Y9PG27   A0A3B1IYS6   A0A087X4H3   L8HV16   A0A096MG47   A0A1B8XUM7   H2Y5C0   A0A1S3N1V9   A0A2Y9PJD3   A0A3B5B5G7   A0A1S3N0I6   A0A3B5L3G3   A0A2P6K9A9  

EC Number

2.1.1.-

Pubmed

19121390    22118469    26354079    23622113    15562597    17510324    + More
21709235    29403074    28812685    17495919    24487278    23594743    26392545    20809919    25069045    21993624    19393038    25186727    25329095    22751099    20431018   

EMBL

BABH01023813    BABH01023814    ODYU01000428    SOQ35179.1    NWSH01000012    PCG80874.1    + More
AGBW02009180    OWR51462.1    KQ459602    KPI93564.1    KQ460106    KPJ17772.1    GAIX01012126    JAA80434.1    RQTK01000214    RUS84203.1    MWRG01009432    PRD27083.1    CVRI01000020    CRK90688.1    HACG01036807    CEK83672.1    CH477534    EAT39381.1    DS232114    EDS35318.1    CP014501    ANB13226.1    CCAG010006733    CCAG010000864    CCAG010021866    JXJN01025068    KK119426    KFM75693.1    AEFK01028874    PYGN01000696    PSN42102.1    KQ422210    KOF75339.1    NEDP02005518    OWF39651.1    PYGN01001172    PSN36960.1    PZQS01000012    PVD21387.1    HACG01016482    CEK63347.1    GFDL01013555    JAV21490.1    GBYX01226459    JAO69998.1    GBYX01226469    JAO69994.1    HACG01003185    CEK50050.1    MWRG01063566    PRD19350.1    CU896630    AMGL01029593    AL929017    KV931362    PIO30848.1    BX649416    RJVU01004711    ROL54831.1    AAPE02044407    UZAJ01018655    VDO82833.1    MWRG01031165    PRD21092.1    GABZ01000942    JAA52583.1    KK115418    KFM65077.1    NIVC01001097    PAA72356.1    NIVC01003321    PAA51994.1    BC153948    AAI53949.1    GBYX01270531    JAO59164.1    GEDC01009764    JAS27534.1    NIVC01001059    PAA72822.1    PAA72823.1    MWRG01054459    PRD19726.1    AAGJ04120415    AYCK01010616    JH882977    ELR47696.1    AYCK01001273    KV461764    OCA14360.1    MWRG01019551    PRD22916.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000053240    UP000076420    + More
UP000271974    UP000183832    UP000008820    UP000002320    UP000092444    UP000092445    UP000078200    UP000092443    UP000092460    UP000054359    UP000265080    UP000087266    UP000007648    UP000245037    UP000053454    UP000242188    UP000245119    UP000002280    UP000265120    UP000257160    UP000000437    UP000095280    UP000002356    UP000265140    UP000245300    UP000248481    UP000286641    UP000001074    UP000009136    UP000050787    UP000261580    UP000245341    UP000245340    UP000215902    UP000261480    UP000018467    UP000007110    UP000248483    UP000261400    UP000261440    UP000252040    UP000264820    UP000028760    UP000008143    UP000007875    UP000261380   

PRIDE

H9J1F4   

Pfam

PF00096   zf-C2H2        + More
PF00452   Bcl-2
PF00498   FHA
PF07776   zf-AD
PF01352   KRAB
PF12171   zf-C2H2_jaz
PF14973   TINF2_N
PF10545   MADF_DNA_bdg

Interpro

IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type       
IPR003604   Matrin/U1-like-C_Znf_C2H2       
IPR026298   Blc2_fam       
IPR000253   FHA_dom       
IPR002475   Bcl2-like       
IPR008984   SMAD_FHA_dom_sf       
IPR036834   Blc2-like_sf       
IPR012934   Znf_AD       
IPR036051   KRAB_dom_sf       
IPR001909   KRAB       
IPR022755   Znf_C2H2_jaz       
IPR017114   YY-1-like       
IPR003656   Znf_BED       
IPR017125   Znf_PRDM5-like       
IPR029400   TINF2_N       
IPR006578   MADF-dom       

SUPFAM

SSF57667   SSF57667        + More
SSF49879   SSF49879       
SSF56854   SSF56854       
SSF109640   SSF109640       

Gene 3D

1.10.437.10    

CDD

cd00060  FHA
cd07765  KRAB_A-box
cd11657  TIN2_N

ProteinModelPortal

H9J1F4   A0A2H1V2Z1   A0A2A4KAD4   A0A212FCK1   A0A194PLF6   A0A194RJP3   + More
S4NTR6   A0A2C9JH10   A0A3S1HQL0   A0A2P6KL77   A0A1J1HRI3   A0A0B7ASR0   Q16XR1   B0WUZ5   A0A167DS55   A0A1B0G6F1   A0A1B0G298   A0A1A9Z518   A0A1A9VNX6   A0A1A9YHC6   A0A1B0C3P8   A0A087UEA4   A0A3P8U4N7   A0A1S3RCS4   A0A1S3SLL5   G3WE46   A0A2P8YCW6   A0A0L8GER1   A0A210PT42   A0A2P8XY76   A0A2T7NJP4   A0A0B6Z4P7   A0A1Q3F1Q7   A0A0S7JXY4   F6YVT7   A0A0S7JZN2   A0A3P8WSG8   A0A0B6Y3F7   A0A3Q1D559   A0A2P6JZ71   F1R9K4   A0A1I8GDJ5   A0A1I8HD30   W5NPT0   A0A3P8Y934   S4RB94   A8DZB2   A0A2Y9HHP3   A0A2G9RSF5   A0A0R4IIB2   A0A3Q7NMW9   A0A3N0Z916   G1NVX4   F1MJ44   A0A183HXJ4   A0A3P8WQF2   A0A3Q4G6W5   A0A2P6K457   K9ITQ9   A0A2U3YCL5   A0A087TIY8   A0A2U3W4D3   A0A267FF26   A0A267DTM9   A8KB37   A0A0S7J1P4   A0A3B3XXG5   W5KKT1   A0A1B6DPD0   A0A267FGJ1   A0A3Q4G6X9   A0A2P6K075   W4YVQ9   A0A1I8JC41   A0A2Y9PSH1   A0A3B5AGL9   A0A3B1IX75   A0A1S3MVV0   A0A3B4DIH5   A0A3P8XSU9   A0A341BSL8   A0A1S3N0J5   A0A3Q1CKR2   A0A3Q3D244   A0A341BU25   A0A2Y9PG27   A0A3B1IYS6   A0A087X4H3   L8HV16   A0A096MG47   A0A1B8XUM7   H2Y5C0   A0A1S3N1V9   A0A2Y9PJD3   A0A3B5B5G7   A0A1S3N0I6   A0A3B5L3G3   A0A2P6K9A9  

PDB

2I13     E-value=0.000136108,     Score=100

KEGG

101745174    no KO assigned | (RefSeq) zinc finger protein 16-like

GO

GO:0003676   GO:0008270   GO:0042981   GO:0005634   GO:0006355   GO:0046872   GO:0003677   GO:0000976   GO:0045944   GO:0003700   GO:0045893   GO:0043565   GO:0045892   GO:0005524   GO:0006468   GO:0004930   GO:0006915   GO:0016651   GO:0046835   GO:0006281   GO:0006259  

Length:

91

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.27864

outside

1  -  91

 

 

Pi

0

Theta

0

Tajima's D

0

CLR

0

CSRT

0

Interpretation

Uncertain