Gene

KWMTBOMO16583

Pre Gene Modal

BGIBMGA005622

Annotation

PREDICTED:_uncharacterized_protein_LOC105385565_[Plutella_xylostella]

Location

Bomo_Scaf027(-):54120-56255      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.006 PlasmaMembrane   Reliability : 1.022

CDS

ATGGAGCAGATACCTGATTTCGGTGTGGTGCTGCCCCCCGCGACGCTGGAGAGCCTCGTGCGTGACATGAATAGCCCCGCCGCGCGCATCACATATAAACCTTTGAAGCTAACCCCTGCTCCGGGAGAGATGGTGGCTGCATTGTACCCGCTGGACGACAACTGGTATCGAGCCAGAGTGCTCTCACTCACCCGACCCGACCAGAGCGTGGAGGTGATGTACGTAGACTACGGCACCGTTCTGTGGGTGAAGGAGGACCAGATCCGCCACCTGGAGGCCGCGTACACGTTCCTGCCGATGCAGGCGGTGCGGTGCGTGCTGGCGGGCGTGACGTGCCCGTCGCACGACTCGCAGCACTGGGCCGCCGCCAAGCGGGTGCTCGGCGAACTAACCAGGACAAGCTGCTCGACGCCCATCATCATGTTAGTGCATCTATACTAA

Protein

MEQIPDFGVVLPPATLESLVRDMNSPAARITYKPLKLTPAPGEMVAALYPLDDNWYRARVLSLTRPDQSVEVMYVDYGTVLWVKEDQIRHLEAAYTFLPMQAVRCVLAGVTCPSHDSQHWAAAKRVLGELTRTSCSTPIIMLVHLY

Uniprot

A0A2A4JYC2   A0A3S2L8F8   A0A212EPH0   S4P4T5   A0A194QAV3   A0A2H1W7R7   + More
A0A2H1WGY2   A0A1S3K2U7   A0A084WRC3   A0A1W5BET0   A0A3Q0JYB6   A0A3Q0K0R3   A0A3Q0K2P2   A0A1W5BIV7   A0A1W5BK42   A0A3Q0JYG1   A0A0L8I6F3   A0A210PZP4   A0A067QWN7   A0A1E1XFQ6   A0A2J7QZW3   A0A1B6CRF5   A0A2J7QZX2   A0A3S1HD80   H9GFS7   A0A182H358   A0A182H1Z7   A0A1B6M7Y3   A0A182JJB2   V4A7D6   C3ZAJ3   B7P649   A0A182FT52   A0A1W5RUW5   A0A2T7NQM1   C3XSY1   A0A1Z5L758   A0A131YZV8   A0A0Q3RGJ2   A0A0K8RL69   A0A261Y190   W5JM66   A0A224Z1U7  

Pubmed

22118469    23622113    26354079    24438588    28812685    24845553    + More
28503490    21881562    26483478    23254933    18563158    28528879    26830274    28876195    20920257    23761445    28797301   

EMBL

NWSH01000358    PCG77021.1    RSAL01000090    RVE48066.1    AGBW02013457    OWR43388.1    + More
GAIX01005839    JAA86721.1    KQ459232    KPJ02668.1    ODYU01006570    SOQ48524.1    ODYU01008499    SOQ52152.1    ATLV01026020    KE525405    KFB52767.1    KQ416401    KOF97076.1    NEDP02005326    OWF41971.1    KK852865    KDR14749.1    GFAC01001282    JAT97906.1    NEVH01009067    PNF34126.1    GEDC01021152    JAS16146.1    PNF34127.1    RQTK01000616    RUS77022.1    AAWZ02014182    JXUM01003595    JXUM01003596    KQ560160    KXJ84111.1    JXUM01104399    KQ564882    KXJ71624.1    GEBQ01007930    JAT32047.1    KB202619    ESO89211.1    GG666602    EEN50396.1    ABJB010564459    DS644427    EEC02071.1    KX216826    AQX83031.1    PZQS01000010    PVD23443.1    GG666460    EEN68849.1    GFJQ02004139    JAW02831.1    GEDV01004010    JAP84547.1    LMAW01001022    KQK84681.1    GADI01002180    JAA71628.1    MVBO01000042    OZJ04390.1    ADMH02001133    ETN63990.1    GFPF01012651    MAA23797.1   

Proteomes

UP000218220    UP000283053    UP000007151    UP000053268    UP000085678    UP000030765    + More
UP000053454    UP000242188    UP000027135    UP000235965    UP000271974    UP000001646    UP000069940    UP000249989    UP000075880    UP000030746    UP000001554    UP000001555    UP000069272    UP000245119    UP000051836    UP000000673   

Pfam

PF00567   TUDOR        + More
PF01753   zf-MYND
PF00643   zf-B_box
PF00013   KH_1
PF01281   Ribosomal_L9_N
PF00565   SNase
PF07690   MFS_1

Interpro

IPR002999   Tudor        + More
IPR000571   Znf_CCCH       
IPR035437   SNase_OB-fold_sf       
IPR036855   Znf_CCCH_sf       
IPR039117   RNF17       
IPR002893   Znf_MYND       
IPR013083   Znf_RING/FYVE/PHD       
IPR001841   Znf_RING       
IPR000315   Znf_B-box       
IPR017907   Znf_RING_CS       
IPR033104   Akap1       
IPR004087   KH_dom       
IPR004088   KH_dom_type_1       
IPR036612   KH_dom_type_1_sf       
IPR009027   Ribosomal_L9/RNase_H1_N       
IPR036935   Ribosomal_L9_N_sf       
IPR020070   Ribosomal_L9_N       
IPR035500   NHR-like_dom_sf       
IPR036259   MFS_trans_sf       
IPR011701   MFS       
IPR020846   MFS_dom       
IPR016071   Staphylococal_nuclease_OB-fold       

SUPFAM

SSF90229   SSF90229        + More
SSF54791   SSF54791       
SSF48508   SSF48508       
SSF55658   SSF55658       
SSF103473   SSF103473       

Gene 3D

2.40.50.90     3.30.40.10     3.30.1370.10     1.10.565.10     3.40.5.10    

CDD

cd00021  BBOX
cd06174  MFS

ProteinModelPortal

A0A2A4JYC2   A0A3S2L8F8   A0A212EPH0   S4P4T5   A0A194QAV3   A0A2H1W7R7   + More
A0A2H1WGY2   A0A1S3K2U7   A0A084WRC3   A0A1W5BET0   A0A3Q0JYB6   A0A3Q0K0R3   A0A3Q0K2P2   A0A1W5BIV7   A0A1W5BK42   A0A3Q0JYG1   A0A0L8I6F3   A0A210PZP4   A0A067QWN7   A0A1E1XFQ6   A0A2J7QZW3   A0A1B6CRF5   A0A2J7QZX2   A0A3S1HD80   H9GFS7   A0A182H358   A0A182H1Z7   A0A1B6M7Y3   A0A182JJB2   V4A7D6   C3ZAJ3   B7P649   A0A182FT52   A0A1W5RUW5   A0A2T7NQM1   C3XSY1   A0A1Z5L758   A0A131YZV8   A0A0Q3RGJ2   A0A0K8RL69   A0A261Y190   W5JM66   A0A224Z1U7  

PDB

5M9N     E-value=5.82637e-08,     Score=130

KEGG

101740900    K17601 WD repeat-containing protein 81 | (RefSeq) WD repeat-containing protein 81

GO

GO:0046872   GO:0007281   GO:0034587   GO:0071546   GO:0031047   GO:0007283   GO:0043046   GO:0033391   GO:0008270   GO:0003723   GO:0016021   GO:0016301   GO:0055085  

PANTHER

PTHR16442   PTHR22948:SF48  

Length:

146

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00833

Exp number, first 60 AAs:

0.00188

Total prob of N-in:

0.04930

outside

1  -  146

 

 

Pi

0

Theta

0

Tajima's D

0

CLR

0

CSRT

0

Interpretation

Uncertain