Gene

KWMTBOMO16579

Annotation

PREDICTED:_uncharacterized_protein_LOC106720343_[Papilio_machaon]

Location

Bomo_Scaf026(+):42246-43647      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.844

CDS

ATGACAAAGCCTCGCACACGTCGTCAGTCTCGTCGACAATCCGAGTATTTTGAACCGACAGAGGACGATTCTTCCCCGCCGCCGACTGCATCGGGAAACATTTCCGTCAACGACATGGTCGCCATGATGTCTACGTGGCAACGCAACCAAGAGGAAACGTTTGAGAAACTTCTACATACAGTTCTCAACCAATCGCACCGGTCATCGCCGCCGCCCGCTCAACCTGCACTTGGAAACTTCGCCTCGTGCAAGGCTCGCTACAGCGGAGCGCCAGACGAATCACTTGACGGATTTATAGACGCCGTAGAGGCCTACAAGGAATGTGCAAACGTAAGCGAAACTAATGCACTACGTGGGTTGTCAATGTTGTTAACTCATGAAGCCGCGACATGGTGGCAAGGAGTTAAGACCACCATGAACAAGTGGGACCACGCCCTCACATCCCTAAGAGGATGA

Protein

MTKPRTRRQSRRQSEYFEPTEDDSSPPPTASGNISVNDMVAMMSTWQRNQEETFEKLLHTVLNQSHRSSPPPAQPALGNFASCKARYSGAPDESLDGFIDAVEAYKECANVSETNALRGLSMLLTHEAATWWQGVKTTMNKWDHALTSLRG

Uniprot

A0A1E1W0J1   A0A0L7KJL8   A0A194QZY2   A0A0L7L2Z3   H9J8Z2   A0A2A4JQE7   + More
A0A2A4J5Q0   A0A2A4J3G0   A0A2A4IXA4   A0A2A4JQ27   A0A2A4IUX1   A0A2A4IXZ6   A0A2A4JSD7   A0A2A4J1V9   A0A2A4K8X8   A0A2A4KB30   A0A0L7KWD2   A0A0L7KSA4   A0A0L7K460   A0A2H1VK17   A0A2A4J7C9   A0A2W1BGD6   A0A2A4ITZ4   A0A2A4JDN4   A0A1I8P7C2   A0A2A4IY04   A0A2A4K7C7   A0A2A4J1D1   A0A1A9VQA4   A0A1B0BFM2   A0A1A9WF37   A0A1A9YLR8   A0A1B0FMQ0   A0A1A9ZWZ9   A0A0K8VDC1   A0A034WHL0   A0A0A1XEB7  

Pubmed

26227816    26354079    19121390    28756777    25348373    25830018    + More

EMBL

GDQN01010610    GDQN01003478    JAT80444.1    JAT87576.1    JTDY01009416    KOB63543.1    + More
KQ460947    KPJ10535.1    JTDY01003352    KOB69686.1    BABH01004844    BABH01004845    NWSH01000779    PCG74285.1    NWSH01003218    PCG66743.1    NWSH01003681    PCG65942.1    NWSH01005325    PCG64289.1    NWSH01000798    PCG74147.1    NWSH01006241    PCG63565.1    NWSH01004894    PCG64601.1    NWSH01000724    PCG74608.1    NWSH01004191    PCG65373.1    NWSH01000039    PCG80378.1    NWSH01000004    PCG81003.1    JTDY01004939    KOB67577.1    JTDY01006541    KOB65909.1    JTDY01010931    KOB57873.1    ODYU01002986    SOQ41175.1    NWSH01002539    PCG68027.1    KZ150063    PZC74189.1    NWSH01006416    PCG63447.1    NWSH01001770    PCG70195.1    NWSH01004745    PCG64715.1    NWSH01000054    PCG80147.1    NWSH01004127    PCG65468.1    JXJN01013567    CCAG010015527    GDHF01015482    JAI36832.1    GAKP01005729    JAC53223.1    GBXI01005474    JAD08818.1   

Proteomes

UP000037510    UP000053240    UP000005204    UP000218220    UP000095300    UP000078200    + More
UP000092460    UP000091820    UP000092443    UP000092444    UP000092445   

PRIDE

H9J8Z2   

Pfam

PF02210   Laminin_G_2        + More
PF00077   RVP
PF00665   rve
PF17921   Integrase_H2C2
PF03732   Retrotrans_gag

Interpro

IPR036875   Znf_CCHC_sf        + More
IPR013320   ConA-like_dom_sf       
IPR001791   Laminin_G       
IPR021109   Peptidase_aspartic_dom_sf       
IPR000403   PI3/4_kinase_cat_dom       
IPR018061   Retropepsins       
IPR001969   Aspartic_peptidase_AS       
IPR001878   Znf_CCHC       
IPR036397   RNaseH_sf       
IPR041588   Integrase_H2C2       
IPR001584   Integrase_cat-core       
IPR012337   RNaseH-like_sf       
IPR005162   Retrotrans_gag_dom       

SUPFAM

SSF57756   SSF57756        + More
SSF49899   SSF49899       
SSF50630   SSF50630       
SSF53098   SSF53098       

Gene 3D

2.40.70.10     3.30.420.10    

ProteinModelPortal

A0A1E1W0J1   A0A0L7KJL8   A0A194QZY2   A0A0L7L2Z3   H9J8Z2   A0A2A4JQE7   + More
A0A2A4J5Q0   A0A2A4J3G0   A0A2A4IXA4   A0A2A4JQ27   A0A2A4IUX1   A0A2A4IXZ6   A0A2A4JSD7   A0A2A4J1V9   A0A2A4K8X8   A0A2A4KB30   A0A0L7KWD2   A0A0L7KSA4   A0A0L7K460   A0A2H1VK17   A0A2A4J7C9   A0A2W1BGD6   A0A2A4ITZ4   A0A2A4JDN4   A0A1I8P7C2   A0A2A4IY04   A0A2A4K7C7   A0A2A4J1D1   A0A1A9VQA4   A0A1B0BFM2   A0A1A9WF37   A0A1A9YLR8   A0A1B0FMQ0   A0A1A9ZWZ9   A0A0K8VDC1   A0A034WHL0   A0A0A1XEB7  

KEGG

101740708    no KO assigned | (RefSeq) uncharacterized LOC101740708

GO

GO:0003676   GO:0008270   GO:0016301   GO:0004190   GO:0015074  

Length:

151

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04091

Exp number, first 60 AAs:

0

Total prob of N-in:

0.67095

inside

1  -  151

 

 

Pi

18.067489

Theta

18.937418

Tajima's D

-0.931803

CLR

0

CSRT

0.147342632868357

Interpretation

Uncertain