Gene

KWMTBOMO16569

Pre Gene Modal

BGIBMGA008844

Annotation

Protein_bowel_[Papilio_machaon]

Location

Bomo_Scaf021(+):23336-27083      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.566

CDS

ATGTTGGCAAATGGTTTGTACATACACTCCAAAGAGAAGCCTTTCAAATGCACAGAATGTGGCAAAGGTTTTTGCCAGTCGAGGACGTTAGCCGTTCACAAAATTCTACACATGGAAGAATCACCACACAAATGTCCAGTTTGCAGCAGAAGCTTCAACCAACGATCCAATTTGAAGACACATCTATTAACACACACAGACCATAAACCTTATGAATGCAATTCATGTGGGAAAGTGTTCAGACGTAACTGTGATCTTCGGAGACATGCACTTACTCATGCAGTCGGTGACGTACCACCGGGAGATGTGCTAGACGTAGGCGAAGAAGACATCGGAAGACCAGGATCTCCCATTGAACCGGGCTATGATGATGAAGATGCCGAAATTTCATCACCTGAACACTCCCCAGTGCGGAGAGCAAGATCTTCATCAGTGGAAAGCATTGGACAAGAACCACAAAGTGAGGAAAAACCACGACGGCAATCGCCAACACCTGTAGAACGCACCCATTGTCATCACAATGAGCAAAGGGACAGAGCAAGCCCATACACAATGCGTCCACAACACACAGACAAACATCGAGTTTACTCATCAGATGAATACGAAAAACGTCGATACACTACTGAGGAAATAATGGAAAAAGAAATGCGCTACACAGAGATTCCTGAACAACAAGTACGACATCCACAATTACAAATCAGACGAGATTTACACCAGATTCCTCCTCCAGATCCGTCCAAAATGACTCAAATTACAAGTCCGTCCATTGATCCGGGACCTTCTAATATGTACTTGCCTCCATTTAGAAAGAGAAGTCACCCACCAGATATCGGAGATAATCCAAGGTCATGTGCTGCAGTTTACAGAAGCAGATCACCGGAGCCAACCAATCTCACAATGCCTCGGCCTCCAATAGGAAATGGGGAAATGGTAGTCGGTATAGCTCCTACACTTATGGGAATGCCGGCATATCATAAATTTGGATTACCGATGCCACCTCCTCACCCGCAAATCGCATACGGTCCAGTGCCTCACCCTGTTTTGACACCACAACAAACTGTCGCTCAAGACTTGATTGTTAAGCATGCGCCGCCGAAGGACACAATACCTTCAACGTCCACTATAGTTACGAACTGCAAAGATGCAGGTACAAGCATGAAGGATGCAGAGGAATCAAGTTCGTCTTACATAGCGAGTGGCATTAAGAATATCATTGGTATTCAACCGCCGGCCAATCCCAAGCCGGGGACAAGCGGATCCAGTGGACCGAAAAAAGGTTTCAGTATAGAAGATATCATGAGACGTTAA

Protein

MLANGLYIHSKEKPFKCTECGKGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTHLLTHTDHKPYECNSCGKVFRRNCDLRRHALTHAVGDVPPGDVLDVGEEDIGRPGSPIEPGYDDEDAEISSPEHSPVRRARSSSVESIGQEPQSEEKPRRQSPTPVERTHCHHNEQRDRASPYTMRPQHTDKHRVYSSDEYEKRRYTTEEIMEKEMRYTEIPEQQVRHPQLQIRRDLHQIPPPDPSKMTQITSPSIDPGPSNMYLPPFRKRSHPPDIGDNPRSCAAVYRSRSPEPTNLTMPRPPIGNGEMVVGIAPTLMGMPAYHKFGLPMPPPHPQIAYGPVPHPVLTPQQTVAQDLIVKHAPPKDTIPSTSTIVTNCKDAGTSMKDAEESSSSYIASGIKNIIGIQPPANPKPGTSGSSGPKKGFSIEDIMRR

Uniprot

A0A0U2SG80   A0A2H1W869   A0A3S2P3H1   A0A1E1WLY8   A0A0N1I8S9   A0A194Q5G3   + More
A0A212EYW5   A0A2W1BJ44   A0A0L7LQ04   A0A182INL6   A0A182UI60   A0A084W4J4   A0A182RX99   A0A182L145   A0A182HUF0   U4TTQ0   U4UXN6   U4TSA9   U4U4I2   N6TJ13   A0A182V165   A0A3F2Z1Y5   A0A182S6Y2   A0A182ML44   A0A1S4GYD7   A0A2M4BG01  

Pubmed

26354079    22118469    28756777    26227816    24438588    20966253    + More
23537049    12364791   

EMBL

KT254331    ALR81971.1    ODYU01006947    SOQ49258.1    RSAL01000034    RVE51431.1    + More
GDQN01008080    GDQN01003188    JAT82974.1    JAT87866.1    KQ460317    KPJ16019.1    KQ459583    KPI98635.1    AGBW02011428    OWR46680.1    KZ150022    PZC74878.1    JTDY01000373    KOB77484.1    ATLV01020337    ATLV01020338    ATLV01020339    KE525299    KFB45138.1    APCN01002456    KB629959    ERL83308.1    KB632408    ERL95116.1    KB630510    ERL83642.1    KB631629    ERL84855.1    APGK01036055    KB740932    ENN77833.1    AXCM01014506    AAAB01008964    GGFJ01002823    MBW51964.1   

Proteomes

UP000283053    UP000053240    UP000053268    UP000007151    UP000037510    UP000075880    + More
UP000075902    UP000030765    UP000075900    UP000075882    UP000075840    UP000030742    UP000019118    UP000075903    UP000076407    UP000075901    UP000075883   

Pfam

PF00096   zf-C2H2

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       

SUPFAM

SSF57667   SSF57667       

ProteinModelPortal

A0A0U2SG80   A0A2H1W869   A0A3S2P3H1   A0A1E1WLY8   A0A0N1I8S9   A0A194Q5G3   + More
A0A212EYW5   A0A2W1BJ44   A0A0L7LQ04   A0A182INL6   A0A182UI60   A0A084W4J4   A0A182RX99   A0A182L145   A0A182HUF0   U4TTQ0   U4UXN6   U4TSA9   U4U4I2   N6TJ13   A0A182V165   A0A3F2Z1Y5   A0A182S6Y2   A0A182ML44   A0A1S4GYD7   A0A2M4BG01  

PDB

2I13     E-value=2.74855e-16,     Score=209

KEGG

101741488    K09215 odd-skipped | (RefSeq) protein bowel

GO

GO:0003676   GO:0046872   GO:0007186   GO:0016500   GO:0004930   GO:0006915   GO:0016651   GO:0046835   GO:0006281   GO:0006259  

Length:

435

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00953

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00343

outside

1  -  435

 

 

Pi

16.601694

Theta

27.282549

Tajima's D

-1.477767

CLR

0

CSRT

0.0619969001549922

Interpretation

Uncertain