Gene

KWMTBOMO16566

Annotation

PREDICTED:_uncharacterized_protein_LOC105386827_[Plutella_xylostella]

Location

Bomo_Scaf018(+):24096-28067      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.227

CDS

ATGGCGACAAAGAGGTCCACAGCATTGCTGGCCACAGCATTGATAACTGTTAAGAATAGTACAGGACATTATACAGTATTGCGCGCCTTAATAGATCAAGGGTCACAGGCTAATTTTATTAGTGAAAGAGCAGCACAACTTTTGAAAGTCAAAGGAACACCCACTAAGGGGACAATCACTGGAGTTGGATCTACACAAACGGAAGTAAATCTGGCAGTCCAGCTTGAAATATTATCTAGATACCAATGCAATTTCAAGCTCAACGTGGAAGCATATGTGATGCCTTCACGTTTAACAACATACTTACCGTCCACAACTATTGCCGACTCCACACTCACCTGGTCGCATTTGAAAGGTCTCAAGCTGGCAGATCCCACCTTTAATCAACCAGGGAGAGTTGATATGCTTCTAGGTGTAGAAGTATATGCAGCCATTCTGAAAAATGAAATTATTCGAGGTCCTCCTGGCTCTCCATGCGCACAACATACAAGTTTTGGATGGATTCTCTTTGGAAAGGTACACAATGACATTGAAGAAAGGAAAATAACAGTAATGCACCACCACATGGATTTTGATGAACTGTTACACACATTATGGGAGTTAGACTGTGATAATCAAAGAAAACTTACACAAGAAGAGGAACTCTGTGAGAACATTTATTATGAAAATGTTAGGAGAGACAATGAAGGAAGATACATTGTGAAATTACCTTTTAAATCATATGTCATACTAAGTACAGAAGGTAATACCAGGGATATAGCACTAAGAAGATTAACACAACTAGAGAGAAGATTACAGAGAGAGATGAAGTTAAGGACAGAATACACTAAAGTGATGCAAGAATATATTGAATTGAATCATATGGAAGAAGTACCAGAAGAAGAATTAGGGAAACCCTCTGTCTACCTTCCTCATCATGCAGTTGTAAAGGATACAAGTGAGACTACCAAAGTAAGAACTGTGTTCAATGCCTCCTCAATGGGATCTAATAATGTTTCCATTAATGATGAGTTACTAGTTGGCCCACAATTGCAAGAAGACATGAGATCATTGGTTATGAGATGGAGACTAAAACGAGTTTGTTTCATAGCAGATATTGAGAAAATGTATCGGCAGATATTGGTTACCAAACAGGATGCAGATTACCAACGAATCTTGTGGAGAATTGATCCAAATTTTAAAGTCAAAGATTACAGATTGCTTCGGGTAACATTTGGAACTGCTTCAGCTCCGTTCCTTGCTGTAAGAACTCTACAACAAGTTGCAGAAGATGAAGGCAAAGATTTCCCTGAAGCAGCTAGAATGATTAAGGAAGACTTCTGGATGGATGACTTATTATCTGGTAACGATACAGTAAGTGAAGCCATTGAATCAGCAAGAAATGTCAGTGACATTTTGAATCGTGGCGGTTTCAAATTACAAAAATGGTCTTCTAACAGTATTGAATTTATGAAAAATATTTCACCTACAGAAAGAAGTACATTGATAAATGTGGATATGAACCTGGGAGGAACTGTTAGAACATTGGGGTTATCATGGAATATAGGAGATGATGTGCTACAGTATAATCTTAATTTGCCAGAAGTGCCACTTACCATTACTAAGAGAAGTATACTTGCTGAGATACAACGCTTATTTGATCCACTTGGTTGGATAGCACCTGCCTTGTTACCTGGAAAACTAATAATACAAAGACTATGGTTGAAAAGACTTACCTGGGATGAAGAAGTAGACTCTGAAACTAAAAGAGATTGGTTAGAGATGAGAAACAACTTAAATTATTTAAAGGAAATTAAAATACCACGCTGGTTACTTATTACTAGTGATGTCATAGAAGATGTGTCAATACATGGATTTTGTGATGCATCAACAATTGCATATGGAGCAGTTGCTTACCTGAGAGTCAAAACTTACAATAATGAATATAAAACTATGCTGATAGCAGCGAAGACTAGAGTCGCACCTGTTAAACCAGTCTCACTGCCCCGTTTGGAACTGTGCGGTGCGGTGTTATTATCAAAGCTCTTGAAACACATCAGTCGTGCTACACGGATACCAAGGAAACAAATCTTTGCTTGGACAGATTCTACCATAGTACTATCATGGCTTACTGGAGACCCGACGAGATGGCAAACATTTGTGAGAAATCGTGTAGTAACAGTGCTTGACAATATTGGAAATGCATGGTATCATGTACAGTCTCAAGACAACCCTGCAGACATAGCATCAAGAGGAATGCTTCTTTCAGATCTCAAAGAATTTAGTTTATGGTGGAACGGCCCTAAATGGCTCACCCATGAAGAAATATTGATGTCTCGCGGAGATAATATTTCTACTGACCTAGAGTTGAGAAGAACAATTATCAATACAAACATAAAAATAGACAATAATCATAATGAAGGAAATTATATACACAATCAATTTGAAAACTTTAACAACTTGATGGAACTACAAAGAACTATTGTGTACTGCAAAAAATTCTTGAATTTTAAACGAAGTAGCGATAACATTAGTACAAAGTGCTTCAGCCCACTGGAGTTAACAGAAGCTCTTGAAACATGTGTGCGGTTAGCACAACATAATGATTTTGAACATGAAATCCACGATTTGTTACAAGGGACTGGAGTAAGTAATAGAAGTGTACTGAAGAATCTCAATCCTTATCTAGACAAGAAAGGTCTTCTCAGAGTAGGCGGTCGATTACGAAATGCGGAAATGGAAAATGACGCTAAATATCCTATGATCATAAGTCATAAGAACCCCATTGCAACATTGATAGTTAGTGATGCACACTTGAAGACACTTCATGGAGGACTCCAACTCACAATGAATTTTGTTAGATCAAGATTCTGGATCATAAGAGTAAAATCATTAATATCAGCTACAATACATAAATGTTTAATATGTGCAAAGCAGAAGGCTAAGGTCCGACACCAACTCATGGGAGACTTACCTGCAGCACGAGTAACACCCACTCGTCCATTCCTACACTCAGGAGTAGATTTTGCAGGCCCACTACAGATTCTGGTTTCCAGAGGAAGAGGCATGAAATGCACTAAGGGATACATATGTATATTTATATGCATGTCAACTAAAGCAATCCACTTGGAACTGGTTGGAGATTTAAGCACCGAGTCATTTTTAGGATGTTTTAGAAGATTTGTTGCCAGAAGAGGTCGATGCTCCCACATTTGGAGTGATCAAGGTACAAACTTTGTAGGAGCCAGTAAAGAATTAGCTAAAATGTGGCAAGAAGCAAAATTAAGTATACCTGAAGATTTAATAAACATTTTAGCTGAAGATGGAACCCATTGGCACTTTAACCCACCTTATAGCCCAAATTTTGGAGGTTTATGGGAAGCTGGGGTGAAATCTATAAAATATCACTTAAGAAGAATTCTTGATAGAACACTTACCTTTGAAGAGATGTCCACCACACTGTGCCAGATTGAAGCCTGCTTAAACTCACGGCCACTATGTCCAATAGATCATAATGATATTGACAATTTAAATGTACTTACTCCTGGACACTTCCTCATTGGAGAAGCTCCAATCAATATACCTGAACCAGATCTTAGCCAAGTGAATGTAAACAGACTGTCTAGATGGCAACATACTCAGAGGATACTTCAAAACTTTTGGCATAAATGGAAGACGGAATATCTCACACGTTTACAACAAAGACCTAAATGGTTAACTTTAAAGGATGAGTTTAAAATTGGAGAAGTGGTTCTGATTAAGGAAGATCACCTTCCTCCGGGTAAATGGGCCTTAGGTCGCATAGTTGAAAAATATCCTGGCTCTGATAACATCTGTAGAGTTTACAGCTTAAAATGTTGTGGTAAATTGATTAAGAGATCCATTAGTAGACTGTGTAAATTGCCAATTAATGAATAA

Protein

MATKRSTALLATALITVKNSTGHYTVLRALIDQGSQANFISERAAQLLKVKGTPTKGTITGVGSTQTEVNLAVQLEILSRYQCNFKLNVEAYVMPSRLTTYLPSTTIADSTLTWSHLKGLKLADPTFNQPGRVDMLLGVEVYAAILKNEIIRGPPGSPCAQHTSFGWILFGKVHNDIEERKITVMHHHMDFDELLHTLWELDCDNQRKLTQEEELCENIYYENVRRDNEGRYIVKLPFKSYVILSTEGNTRDIALRRLTQLERRLQREMKLRTEYTKVMQEYIELNHMEEVPEEELGKPSVYLPHHAVVKDTSETTKVRTVFNASSMGSNNVSINDELLVGPQLQEDMRSLVMRWRLKRVCFIADIEKMYRQILVTKQDADYQRILWRIDPNFKVKDYRLLRVTFGTASAPFLAVRTLQQVAEDEGKDFPEAARMIKEDFWMDDLLSGNDTVSEAIESARNVSDILNRGGFKLQKWSSNSIEFMKNISPTERSTLINVDMNLGGTVRTLGLSWNIGDDVLQYNLNLPEVPLTITKRSILAEIQRLFDPLGWIAPALLPGKLIIQRLWLKRLTWDEEVDSETKRDWLEMRNNLNYLKEIKIPRWLLITSDVIEDVSIHGFCDASTIAYGAVAYLRVKTYNNEYKTMLIAAKTRVAPVKPVSLPRLELCGAVLLSKLLKHISRATRIPRKQIFAWTDSTIVLSWLTGDPTRWQTFVRNRVVTVLDNIGNAWYHVQSQDNPADIASRGMLLSDLKEFSLWWNGPKWLTHEEILMSRGDNISTDLELRRTIINTNIKIDNNHNEGNYIHNQFENFNNLMELQRTIVYCKKFLNFKRSSDNISTKCFSPLELTEALETCVRLAQHNDFEHEIHDLLQGTGVSNRSVLKNLNPYLDKKGLLRVGGRLRNAEMENDAKYPMIISHKNPIATLIVSDAHLKTLHGGLQLTMNFVRSRFWIIRVKSLISATIHKCLICAKQKAKVRHQLMGDLPAARVTPTRPFLHSGVDFAGPLQILVSRGRGMKCTKGYICIFICMSTKAIHLELVGDLSTESFLGCFRRFVARRGRCSHIWSDQGTNFVGASKELAKMWQEAKLSIPEDLINILAEDGTHWHFNPPYSPNFGGLWEAGVKSIKYHLRRILDRTLTFEEMSTTLCQIEACLNSRPLCPIDHNDIDNLNVLTPGHFLIGEAPINIPEPDLSQVNVNRLSRWQHTQRILQNFWHKWKTEYLTRLQQRPKWLTLKDEFKIGEVVLIKEDHLPPGKWALGRIVEKYPGSDNICRVYSLKCCGKLIKRSISRLCKLPINE

Uniprot

A0A2H1WH28   A0A0N0PAG9   A0A0N1IHU1   A0A226D417   A0A1Y1LBZ3   A0A0J7KFC5   + More
A0A0J7KGI8   A0A0J7N890   A0A0J7N465   A0A0J7KB34   A0A226EUF5   W8CCT3   A0A0J7KBZ0   A0A226EPI5   A0A0J7KCR4   Q8I7Q1   A0A0J7ND98   A0A0J7KCB9   A0A0J7N5C9   A0A0J7N536   A0A0J7KCI2   A0A0J7K7L1   A0A0J7KBS8   A0A023F0J1   A0A1S3DHZ9   A0A3Q0JI79   A0A1S3DIE2   A0A3Q0JDB5   A0A2A4K6T9   A0A0J7KCX3   J9LHB7   A0A224XG39   A0A1Y1L369   A0A087T9T6   Q8MNR4   A0A1W7R6L7   V5GHM7   X1XTY9   A0A182HA33   A0A2S2Q6Z5   A0A2S2PTX9   A0A182H647   A0A2S2NLW5   A0A0J7KDN6   A0A1Y1KMX0   A0A023EZC2   A0A023EZB2   A0A2S2P1P0   A0A1U8N896   J9LVB4   A0A1W7R6I7   A0A0J7K9A7   A0A2S2QQM0   A0A3L8DF49   Q4JS97   A0A1Y1LIG5   A0A0J7K9X4   X1WN86   A0A0J7N5Z0   A0A1Y1MTT1   X1WVV7   A7XDH0   A0A0J7KD75   A0A1W7R6F4   X1WV59   A0A2M4B9H4   A0A2S2NCU7   A0A194RAG7   A0A2S2PUJ2   X1WNM7   A0A1Y1N3M1   A0A0C9PIT9   J9KCB6   A0A2S2N7B6   X1WK09   W4VR47   J9LYM7   V9GZW9   E9J9Y8   A0A1W7R6J2   A0A034WA88   A0A1Y1N4T1   A0A226DUQ5   A0A2M4CSC7   A0A0N1IBH6   A0A2S2PNC2   A0A034W2D1   A0A2M4B8V6   A0A0C9QLM0   X1XTX7   J9K169   A0A194QJ48   A0A1W7R6J0   A0A0J7KC70   X1WY95   W8ANH7   A0A2S2QE32   A0A0J7KBV8   A0A2A4JBY8  

Pubmed

26354079    28004739    24495485    25474469    14634869    26483478    + More
25893780    30249741    15944077    17761848    21282665    25348373   

EMBL

ODYU01008608    SOQ52337.1    KQ458473    KPJ05885.1    KQ460036    KPJ18393.1    + More
LNIX01000036    OXA39969.1    GEZM01060254    JAV71154.1    LBMM01008324    KMQ88972.1    LBMM01007859    KMQ89359.1    LBMM01008464    KMQ88855.1    LBMM01010417    KMQ87475.1    LBMM01010405    KMQ87487.1    LNIX01000002    OXA60848.1    GAMC01003146    JAC03410.1    LBMM01009964    KMQ87756.1    OXA59522.1    LBMM01009551    KMQ88039.1    AY180917    AAN87269.1    LBMM01006539    KMQ90520.1    LBMM01009645    KMQ87967.1    LBMM01009746    KMQ87900.1    LBMM01009898    KMQ87805.1    LBMM01009688    KMQ87939.1    LBMM01012188    KMQ86362.1    LBMM01009888    KMQ87813.1    GBBI01004211    JAC14501.1    NWSH01000070    PCG79985.1    LBMM01009210    KMQ88303.1    ABLF02022040    ABLF02056888    GFTR01008874    JAW07552.1    GEZM01066272    JAV68024.1    KK114194    KFM61875.1    AJ487856    CAD32253.1    GEHC01000864    JAV46781.1    GALX01004947    JAB63519.1    ABLF02022912    ABLF02038819    ABLF02051942    ABLF02060282    JXUM01030959    KQ560903    KXJ80414.1    GGMS01004301    MBY73504.1    GGMR01020322    MBY32941.1    JXUM01113346    KQ565681    KXJ70776.1    GGMR01005535    MBY18154.1    LBMM01009202    KMQ88311.1    GEZM01085145    GEZM01085143    JAV60187.1    GBBI01004139    JAC14573.1    GBBI01004140    JAC14572.1    GGMR01010750    MBY23369.1    ABLF02004142    GEHC01000869    JAV46776.1    LBMM01011283    KMQ86917.1    GGMS01010815    MBY80018.1    QOIP01000009    RLU19024.1    CR954257    CAJ14165.1    GEZM01054765    JAV73413.1    LBMM01010986    KMQ87097.1    ABLF02041590    LBMM01009496    KMQ88090.1    GEZM01021505    JAV88969.1    ABLF02041505    EF426679    ABP48078.1    LBMM01009212    KMQ88302.1    GEHC01000898    JAV46747.1    ABLF02041731    GGFJ01000337    MBW49478.1    GGMR01002340    MBY14959.1    KQ460500    KPJ14270.1    GGMR01020500    MBY33119.1    ABLF02042806    GEZM01018629    GEZM01018623    JAV90127.1    GBYB01000873    JAG70640.1    ABLF02042264    GGMR01000448    MBY13067.1    ABLF02065856    GANO01004788    JAB55083.1    ABLF02016109    ABLF02016113    U23420    AAB03640.1    GL769615    EFZ10365.1    GEHC01000894    JAV46751.1    GAKP01007887    JAC51065.1    GEZM01012999    JAV92824.1    LNIX01000011    OXA48427.1    GGFL01004049    MBW68227.1    KQ459312    KPJ01687.1    GGMR01018294    MBY30913.1    GAKP01010103    JAC48849.1    GGFJ01000364    MBW49505.1    GBYB01004444    JAG74211.1    ABLF02006304    ABLF02036268    ABLF02024568    KQ458793    KPJ04955.1    GEHC01000877    JAV46768.1    LBMM01009863    KMQ87831.1    ABLF02030854    ABLF02067347    GAMC01020552    JAB86003.1    GGMS01006802    MBY76005.1    LBMM01009941    KMQ87772.1    NWSH01001945    PCG69607.1   

Proteomes

UP000053268    UP000053240    UP000198287    UP000036403    UP000079169    UP000218220    + More
UP000007819    UP000054359    UP000069940    UP000249989    UP000189702    UP000279307   

PRIDE

Q8I7Q1    Q8MNR4   

Pfam

PF17921   Integrase_H2C2        + More
PF05585   DUF1758
PF03564   DUF1759
PF05380   Peptidase_A17
PF18701   DUF5641
PF00078   RVT_1
PF00665   rve
PF12259   Baculo_F
PF00230   MIP
PF17919   RT_RNaseH_2
PF17917   RT_RNaseH

Interpro

IPR001584   Integrase_cat-core        + More
IPR012337   RNaseH-like_sf       
IPR008042   Retrotrans_Pao       
IPR001878   Znf_CCHC       
IPR008737   Peptidase_asp_put       
IPR040676   DUF5641       
IPR005312   DUF1759       
IPR041588   Integrase_H2C2       
IPR036397   RNaseH_sf       
IPR021109   Peptidase_aspartic_dom_sf       
IPR000477   RT_dom       
IPR001995   Peptidase_A2_cat       
IPR022048   Envelope_fusion-like       
IPR000727   T_SNARE_dom       
IPR000425   MIP       
IPR023271   Aquaporin-like       
IPR041373   RT_RNaseH       
IPR001969   Aspartic_peptidase_AS       
IPR041577   RT_RNaseH_2       
IPR013087   Znf_C2H2_type       

SUPFAM

SSF53098   SSF53098        + More
SSF50630   SSF50630       
SSF81338   SSF81338       

Gene 3D

3.30.420.10     2.40.70.10     1.20.1080.10    

ProteinModelPortal

A0A2H1WH28   A0A0N0PAG9   A0A0N1IHU1   A0A226D417   A0A1Y1LBZ3   A0A0J7KFC5   + More
A0A0J7KGI8   A0A0J7N890   A0A0J7N465   A0A0J7KB34   A0A226EUF5   W8CCT3   A0A0J7KBZ0   A0A226EPI5   A0A0J7KCR4   Q8I7Q1   A0A0J7ND98   A0A0J7KCB9   A0A0J7N5C9   A0A0J7N536   A0A0J7KCI2   A0A0J7K7L1   A0A0J7KBS8   A0A023F0J1   A0A1S3DHZ9   A0A3Q0JI79   A0A1S3DIE2   A0A3Q0JDB5   A0A2A4K6T9   A0A0J7KCX3   J9LHB7   A0A224XG39   A0A1Y1L369   A0A087T9T6   Q8MNR4   A0A1W7R6L7   V5GHM7   X1XTY9   A0A182HA33   A0A2S2Q6Z5   A0A2S2PTX9   A0A182H647   A0A2S2NLW5   A0A0J7KDN6   A0A1Y1KMX0   A0A023EZC2   A0A023EZB2   A0A2S2P1P0   A0A1U8N896   J9LVB4   A0A1W7R6I7   A0A0J7K9A7   A0A2S2QQM0   A0A3L8DF49   Q4JS97   A0A1Y1LIG5   A0A0J7K9X4   X1WN86   A0A0J7N5Z0   A0A1Y1MTT1   X1WVV7   A7XDH0   A0A0J7KD75   A0A1W7R6F4   X1WV59   A0A2M4B9H4   A0A2S2NCU7   A0A194RAG7   A0A2S2PUJ2   X1WNM7   A0A1Y1N3M1   A0A0C9PIT9   J9KCB6   A0A2S2N7B6   X1WK09   W4VR47   J9LYM7   V9GZW9   E9J9Y8   A0A1W7R6J2   A0A034WA88   A0A1Y1N4T1   A0A226DUQ5   A0A2M4CSC7   A0A0N1IBH6   A0A2S2PNC2   A0A034W2D1   A0A2M4B8V6   A0A0C9QLM0   X1XTX7   J9K169   A0A194QJ48   A0A1W7R6J0   A0A0J7KC70   X1WY95   W8ANH7   A0A2S2QE32   A0A0J7KBV8   A0A2A4JBY8  

KEGG

102466060    no KO assigned | (RefSeq) Mir3242, bmo-mir-3242; microRNA 3242

GO

GO:0008270   GO:0003676   GO:0015074   GO:0004190   GO:0016021   GO:0015267   GO:0007186   GO:0016500   GO:0004930   GO:0006915   GO:0016651   GO:0046835   GO:0006281   GO:0006259  

Length:

1298

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.397150000000001

Exp number, first 60 AAs:

0.33028

Total prob of N-in:

0.01590

outside

1  -  1298

 

 

Pi

3.503667

Theta

12.627215

Tajima's D

-0.967352

CLR

0

CSRT

0.142292885355732

Interpretation

Uncertain