Gene

KWMTBOMO16559  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002359

Annotation

Zinc_finger_DNA_binding_protein_[Operophtera_brumata]

Location

Bomo_Scaf016(+):41406-42610      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.231

CDS

ATGCATTGTGAGGGTTGCACTACAAAATTATGCAAGGAAAAATTTAAGTGCAATAAATGTGCTTCAGAATACTGCTTTGATTGCGTGAATATTGCTCCCGCTTCAAGGAAACAATTAAGCGCTAAGCAAATTGCGTCTTTAAGCTGTCCTTCTTGTCAAAACGTTACGAAACGTAAAACTAACTGCAATACTCCGATCCACAAACGTCCTGATTTGAATGACACTGTCAATGCTTCTTCCTCTTTTACTTCCTACGACTCGACTGCAGTGGATGCTTCCTCGGACATGGAATCGATCAGCGGACAAGTGACCTTGGAGAGCATAGGGCAGCTTCTCGATATGAAACTAGCGCCTGGCTCTTCGTTCATGACTCATTTGCGATCCTCGCTTAGGAAGGATATCACAGAAATGGTGTCTCAGGAGGTTAATCGTGCTGTTGAGGGCTTGAGAGTGGATTTCTCGCAAACGACGGATTTCATGTCTGCTGAGCAGAAAAGTATCCGATCCAAAATTTGTGATAAGGAAAAAGAAATCGAGTTACTCAGACTACAACTTAATAAAACCGGGGAATCTTTACACAGGCTTCAGAATCGAGTTTCTATGGTGGAGAAAATTTCTCGAGACCTCAATATTGAGATTCACGAAGTTCCGGAGAATAATCATGAGAACCTTAATCACTTATTTAAAAAACTTTGTGAGTTTTTGAGTGTCAACATATCTGATGCAGATATCAAATCTTGTCGTCGAGTTGCTAAAATGAATCCTGACTCGAGAAGGCCAAGAAATATACTAATCTCACTGTCATCCCAGCGTCTTCGTGATGAGGTTCTATCTGCGGTTACTAGGTATAACAAGTCTAATTCAAAAGATAAGCTTGGAACCGCTCAAGTCGGCTTAACATGCGCGGTTTCAAGGATTTATGTATCTGAGCATCTTTCTCCTGAGGCTAAGGAACTTCATAGCATGGCTAGAAAACTGAGCAAAGAGAAAAATTATAAATTTGTTTGGGTTCGTTTTGGTCAAATTTATATTCGAAAGGACGAGAAATGTCCCGCAGTTCATATTAAAAATATTGAAATTATTAATAAACTGAGAAACGAGTAA

Protein

MHCEGCTTKLCKEKFKCNKCASEYCFDCVNIAPASRKQLSAKQIASLSCPSCQNVTKRKTNCNTPIHKRPDLNDTVNASSSFTSYDSTAVDASSDMESISGQVTLESIGQLLDMKLAPGSSFMTHLRSSLRKDITEMVSQEVNRAVEGLRVDFSQTTDFMSAEQKSIRSKICDKEKEIELLRLQLNKTGESLHRLQNRVSMVEKISRDLNIEIHEVPENNHENLNHLFKKLCEFLSVNISDADIKSCRRVAKMNPDSRRPRNILISLSSQRLRDEVLSAVTRYNKSNSKDKLGTAQVGLTCAVSRIYVSEHLSPEAKELHSMARKLSKEKNYKFVWVRFGQIYIRKDEKCPAVHIKNIEIINKLRNE

Uniprot

A0A0L7K2U8   A0A0L7LTI6   A0A2H1W956   A0A194QEB0   A0A2A4IXU4   A0A0L7K3N5   + More
A0A0L7K4K4   A0A0L7KQ92   A0A0L7LEU2   A0A2A4IUX2   A0A0L7L1J8   A0A0L7LEV4   A0A2H1W5G4   A0A2A4IU35   A0A2A4JC78   A0A0L7K3E6   A0A2A4IUU8   A0A0L7L3E9   A0A2H1WBH0   A0A2H1V294   A0A0L7LF48   A0A2A4JBL7   A0A0L7K2E3   A0A0L7K4I6   A0A2W1BYU6   A0A0L7KUP7   A0A2A4IZ89   A0A2W1BT87   A0A2A4IYB9   A0A2H1VJZ0   A0A2H1X1K9   A0A2H1WYV3   A0A2H1WVR8   A0A0L7KY55   A0A1Y1JXQ1   A0A0L7L8J7   A0A2A4J0K9   A0A2W1BEV5   H9J7H5   A0A2A4IZ17   A0A2H1WI81   A0A0L7LU57  

Pubmed

26227816    26354079    28756777    28004739    19121390   

EMBL

JTDY01013334    JTDY01001687    KOB52155.1    KOB73157.1    JTDY01000136    KOB78669.1    + More
ODYU01007128    SOQ49629.1    KQ459054    KPJ03878.1    NWSH01005418    PCG64228.1    JTDY01012405    KOB52279.1    JTDY01010989    KOB57787.1    JTDY01007401    KOB65231.1    JTDY01001361    KOB74078.1    NWSH01006948    PCG63178.1    JTDY01003535    KOB69383.1    JTDY01001411    KOB73935.1    ODYU01006462    SOQ48321.1    NWSH01007563    PCG62908.1    NWSH01002032    PCG69366.1    JTDY01014577    KOB52017.1    NWSH01007173    PCG63054.1    JTDY01003264    KOB69846.1    ODYU01007238    SOQ49844.1    ODYU01000349    SOQ34960.1    JTDY01001455    KOB73826.1    NWSH01002191    PCG68944.1    JTDY01015045    KOB51976.1    KOB57786.1    KZ149914    PZC78000.1    JTDY01005451    KOB66988.1    NWSH01004298    PCG65247.1    KZ150018    PZC74943.1    NWSH01005479    PCG64170.1    ODYU01002971    SOQ41143.1    ODYU01012701    SOQ59142.1    ODYU01012049    SOQ58146.1    ODYU01011375    SOQ57082.1    JTDY01004426    KOB68173.1    GEZM01097808    JAV54094.1    JTDY01002226    KOB71853.1    NWSH01003975    PCG65605.1    KZ150150    PZC72841.1    BABH01013843    NWSH01005158    PCG64392.1    ODYU01008832    SOQ52780.1    JTDY01000093    KOB78914.1   

Proteomes

UP000037510    UP000053268    UP000218220    UP000005204   

PRIDE

H9J7H5   

Pfam

PF03258   Baculo_FP        + More
PF00628   PHD
PF14529   Exo_endo_phos_2

Interpro

IPR004941   Baculo_FP        + More
IPR001965   Znf_PHD       
IPR013083   Znf_RING/FYVE/PHD       
IPR019787   Znf_PHD-finger       
IPR011011   Znf_FYVE_PHD       
IPR019786   Zinc_finger_PHD-type_CS       
IPR004244   Transposase_22       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR001841   Znf_RING       
IPR002219   PE/DAG-bd       

SUPFAM

SSF57903   SSF57903        + More
SSF56219   SSF56219       

Gene 3D

3.30.40.10     3.60.10.10    

ProteinModelPortal

A0A0L7K2U8   A0A0L7LTI6   A0A2H1W956   A0A194QEB0   A0A2A4IXU4   A0A0L7K3N5   + More
A0A0L7K4K4   A0A0L7KQ92   A0A0L7LEU2   A0A2A4IUX2   A0A0L7L1J8   A0A0L7LEV4   A0A2H1W5G4   A0A2A4IU35   A0A2A4JC78   A0A0L7K3E6   A0A2A4IUU8   A0A0L7L3E9   A0A2H1WBH0   A0A2H1V294   A0A0L7LF48   A0A2A4JBL7   A0A0L7K2E3   A0A0L7K4I6   A0A2W1BYU6   A0A0L7KUP7   A0A2A4IZ89   A0A2W1BT87   A0A2A4IYB9   A0A2H1VJZ0   A0A2H1X1K9   A0A2H1WYV3   A0A2H1WVR8   A0A0L7KY55   A0A1Y1JXQ1   A0A0L7L8J7   A0A2A4J0K9   A0A2W1BEV5   H9J7H5   A0A2A4IZ17   A0A2H1WI81   A0A0L7LU57  

KEGG

NA   

GO

GO:0046872   GO:0035556  

PANTHER

PTHR11505  

Length:

367

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00217

Exp number, first 60 AAs:

0.00016

Total prob of N-in:

0.02593

outside

1  -  367

 

 

Pi

20.054466

Theta

29.713994

Tajima's D

-0.890102

CLR

0

CSRT

0.15739213039348

Interpretation

Uncertain