Gene

KWMTBOMO16558

Pre Gene Modal

BGIBMGA009306

Annotation

PREDICTED:_follicle-stimulating_hormone_receptor_[Amyelois_transitella]

Location

Bomo_Scaf015(+):55126-96431      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.656

CDS

ATGATTGTGCAGTCGGCGGAGGACAACTTGATCTCTGAGCTGGAGGGCGGCGCGGTGGGGGCGCGCGGGCTGCGCACGCTGCGGCTGTCGCGCAACCTGCTCCGCGCCGTGCCCACGCACGCGCTGGCGCCGCTGCACCACCTGCAGACGCTGAGTCTCTCCGGGAACCTGATCACCGAGCTGTCAGACTCCTCGCTGCCTCCGCTGCCCGCGCTGCACACGCTAGTCCTGAAGAGGAACCGCATCACCCACATAGAGCCTCGCGCCTTCGCTAACACTCCCGCCCTGCACGTGCTACGCCTGGAAGAAAACCTACTATCGGAACTTCCGCCAGCGATACAGCTACTGCCCGTGCTACAAGATCTGTTGTTGAGTGGGAACCGCATCGAGGTGGTGGAGGCCGGTATTCTCCAACAATGTCGTCTCTTGAAGCGGCTGGACCTCCGCGGCAACCCGCTCACTCGCCTCCACAGACATGCGCTGCAGCATCTGCCGCATCTCAGGACGCTCATCCTGTCGGAGGCGCGCGGACTCCGCGAGGTTCCGTCGCTGAACGGGTCGGCGCAGGTCCGCACCCTCCGCGTGGAGCGCGCCCGCCTCACGCGGCTCTCCACGGACCTCTGTCGGCACGCGCCTCTGCTGCAGTCGCTCGAAATGAAGTCCAACTACATAGATCGCGTTCCAGACCTGCACGAATGCTCCGAACTTCATTTACTAGACCTGTCGTCTAACGAGATCAGCGCGGTGCAGGGCAGCTCGTTCCGCGGCCTGCACAAACTGCTGGACCTGCTCCTCGCGAGGAACCGGCTGCGGCACATCCCCTCCGACACCTTCATACACACACCGGAGCTACAGAGACTGAATCTTGAAGAGAACCAGATAGAGCATATAGACATGGAGGCGTTCGTATCGATCTCTAAATTGGAAGATTTGAACGTGGGGAACAACATATTCCCGTGGCTCCCCGCCAGCGGACTGCAGCGGCTCCTCCATCTCAAGGCGCACAACAACCCCAACCTGCGGCACTTCCATCCGCCGGACGTCTTCCCCAGGATACAGACACTGGTACTGTCGTACGCGTACCACTGCTGCGAGTTCATGCCGCTGATGGAGGGCGGCACCGTCACGGAGGAGGAGACTTCGGAGGAAGACGCCTCCACCGACCTCGTCATCATCCCCTCACAGAGTATCGACGCCGAAGCCTGGCTTAACGCCACTGACGTGTGGTCGCAATTGAACGTGTCGGCTGCTGGCGGCAGTCGCTGGCAGGCCATGCTGGAGGACTGGGAATCCGATCTGGTAGAAGGCGTCTCTGAACATCGCGTCGAACCTTCGAGACGCGTCCAGTGTCTGCCTCTACCCGGTCCATTCCTTCCGTGTGTGGACCTGTTCGACTGGTGGACGCTCCGCTGCGGCGTGTGGGCGGTGTTCCTGCTGGCGCTGCTCGGCAACGGCACGGTGGTGTTCGTGCTCATCTGCAGCCGCAGCCGCATCGACGTGCCGCGCTTCCTCGTCACCAACCTCGCCGCCGCTGACTTCTTCATGGGAATATATTTAGGCTTCTTGGCGGTCGTGGATGCGGGAACCCTGGGAGAGTTCCGCGCGCACGCGATCGCCTGGCAGATGTCCGGCGGCTGCCGCCTGGCGGGCTTCCTCGGCGTGCTGTCCTCCGAGCTGTCGGTGTACACGCTGGCGGTCATCACGCTCGAGCGGAACTACGCCATCACTCACGCCATGCACCTCAACAAGAGACTGTCGCTGCGACACGCCGCTTTCGTGATGGCGGCGGGCTGGGGCTTCTCCCTGACCGCGGCCTCACTGCCGCTGCTGGGCGTGTCCGACTACCGCAAGTTCGCCGTGTGCCTGCCCTTCGAGACCAGCTCGCCCGTCGCGCTCGGCTACGTGGTGTCCCTGCTCGCCATCAACGGAGTCGCTTTCCTGGTGCTGCTCGGCTGCTACCTCAAGATGTACTGCGCCATCCGGGGCTCCCAGGCATGGAACTCCAACGACTCCCGCATCGCGAAGCGGATGGCGCTGCTCGTGTTCACGGATTTCCTGTGTTGGTCTCCGATCGCGTTTTTCGCTCTAACCGCCGCGTTCGGGTTGCAGCTCGTTTCTTTGGAGGAGGCTAAAGTTTTCACTGTATTCGTACTACCGCTGAACTCCTGCTGCAATCCATTCTTATACGCGATCTTAACGAAACAATTCAAAAAGGATTGCGCGCTCGTCTGCAAGGCGATCGAGGAGTCCAGGGTGACCCGCGGCATCGGCCGCTGTCGGCACTCGTCCAACTTCAGCAACCGCCAGACGCCGGCCAACACCAACAGCCTCGCCGAGCGCTCGTCCCGCGGGCAGCACCACGCGGCGTGCGCGTGCCGCCGCCTGCTGCCGGCCGGCGCGCCGCCCCCGCCGCCGCCCGCCGCCCGCCGCGCGCGACTGCTGCGCTGGCTGCGCGCGTGCGGGCCCCGCTCGGCGCCCGCGCCCGCCCCCGCGCCCCGCCCGCCCGCCGCCGCGCCCGCCCGCACGGGCTCGGTGTCGTCGTCGGTGGAGTTCTCGTCGTCCCGCTCGGACTCGTGGCGCACGTACGGGCGCGCGCCCCCGCCGCCGCGGCGCGCCGTGTCGTGGCTGGTGGCTCGCAAGACGTCGCAGGACTCGAACCTGTCGTCGTCGCGCAACGACTCGTCCGGGTCCAACGCGACGGCGTCGACGGGCACGTGGCGCACGTCGCGGTCGGGGGGCAGCGCGGCGGGGGGCGCGGGCCGGCCGCGGCTGACGCGCCAGCCCGCGGTGTCGGCCGAGGAGCCCCCGCTGTCCCCCCCCGCGCTGCCGGCGCCGCGCCACCTGCACACGATCCCGTCGGCAGCAGAGGCGGAGCTGCAGCAGGAGGAGCCGGACGCCCGTTGA

Protein

MIVQSAEDNLISELEGGAVGARGLRTLRLSRNLLRAVPTHALAPLHHLQTLSLSGNLITELSDSSLPPLPALHTLVLKRNRITHIEPRAFANTPALHVLRLEENLLSELPPAIQLLPVLQDLLLSGNRIEVVEAGILQQCRLLKRLDLRGNPLTRLHRHALQHLPHLRTLILSEARGLREVPSLNGSAQVRTLRVERARLTRLSTDLCRHAPLLQSLEMKSNYIDRVPDLHECSELHLLDLSSNEISAVQGSSFRGLHKLLDLLLARNRLRHIPSDTFIHTPELQRLNLEENQIEHIDMEAFVSISKLEDLNVGNNIFPWLPASGLQRLLHLKAHNNPNLRHFHPPDVFPRIQTLVLSYAYHCCEFMPLMEGGTVTEEETSEEDASTDLVIIPSQSIDAEAWLNATDVWSQLNVSAAGGSRWQAMLEDWESDLVEGVSEHRVEPSRRVQCLPLPGPFLPCVDLFDWWTLRCGVWAVFLLALLGNGTVVFVLICSRSRIDVPRFLVTNLAAADFFMGIYLGFLAVVDAGTLGEFRAHAIAWQMSGGCRLAGFLGVLSSELSVYTLAVITLERNYAITHAMHLNKRLSLRHAAFVMAAGWGFSLTAASLPLLGVSDYRKFAVCLPFETSSPVALGYVVSLLAINGVAFLVLLGCYLKMYCAIRGSQAWNSNDSRIAKRMALLVFTDFLCWSPIAFFALTAAFGLQLVSLEEAKVFTVFVLPLNSCCNPFLYAILTKQFKKDCALVCKAIEESRVTRGIGRCRHSSNFSNRQTPANTNSLAERSSRGQHHAACACRRLLPAGAPPPPPPAARRARLLRWLRACGPRSAPAPAPAPRPPAAAPARTGSVSSSVEFSSSRSDSWRTYGRAPPPPRRAVSWLVARKTSQDSNLSSSRNDSSGSNATASTGTWRTSRSGGSAAGGAGRPRLTRQPAVSAEEPPLSPPALPAPRHLHTIPSAAEAELQQEEPDAR

Uniprot

A0A1Z2RRJ6   A0A3S2LWM3   A0A0S1YDB3   A0A212FFU8   A0A1B6D8H7   A0A1B6C4N7   + More
N1NTY6   D2A057   E0VBH3   A0A1Y1LE83   A0A1Y1LE78   B5FX31   A0A146LLJ9   A0A0A9WC00   A0A1B0CA50   U3U4H2   A0A067RIS3   A0A1S4F8L0   Q17BX6   A0A0L7QQW4   A0A310SHS4   A0A084W5T2   K7J2S0   J9JJ85   Q7PNF8   A0A1S4GYP9   A0A154PEE5   A0A0M8ZS75   A0A2H8TX37   A0A182NTW5   A0A182XLC1   A0A182ICA0   A0A182RM87   A0A088A353   A0A336KBL3   A0A026VW63   A0A3L8D7G4   A0A158NUS9   E2A761   A0A182P8N2   E2BPS9   A0A151IVP6   F4WE23   A0A195BBD8   A0A151K0H7   A0A182F1X3   A0A0C9RR80   A0A151WNU2   A0A1J1IKH6   W5JTD1   A0A182QEA2   A0A0P5N468   A0A0N8B2S3   A0A0P5PSV4   A0A0P5UJ40   A0A0P5C2I2   A0A0P5BFH2   A0A0P6IRX4   A0A0P5Q151   A0A0P5J8A3   A0A0N8B7G6   A0A0P5JTW1   A0A0P5IZA1   A0A0P6FSX1   A0A0N8CA43   A0A0P5JKI1   A0A0P5IZH6   A0A0P5PB86   A0A182MV53   A0A0P5NH94   A0A182Y3A4   E9G3Z3   A0A0P5VY59   A0A0P5UJD4   A0A0P5RUF7   A0A0N8BN83   A0A0P6B1J3   A0A0P5C2S6   A0A162PR01   A0A0P6E2F1   B3MMS8   B4MVN3   A0A3B0JQ41   A0A3B0JNN5   Q29K98   B4GX48   A0A0P5A7E3   A0A0P5TX13   A0A1I8MKD6   A0A0P5LXM4   A0A0J9R276   B4Q5G3   B4HXD6   A0A0R3NV45   A0A0P5P452   B4M8P6   A0A1D2M907   A0A0Q9WAP5  

Pubmed

28605547    22118469    18054377    18025266    18316733    20068045    + More
21843505    23604020    18362917    19820115    20566863    28004739    26823975    25401762    23932938    24845553    30735632    17510324    24438588    20075255    12364791    24508170    30249741    21347285    20798317    21719571    20920257    23761445    25244985    21292972    17994087    15632085    23185243    25315136    22936249    27289101    18057021   

EMBL

KY938830    ASA46471.1    RSAL01000154    RVE45663.1    KT031049    ALM88347.1    + More
AGBW02008766    OWR52600.1    GEDC01015300    JAS21998.1    GEDC01028826    JAS08472.1    BK006107    DAA64488.1    KQ971338    EFA02891.2    DS235030    EEB10729.1    GEZM01060193    JAV71201.1    GEZM01060195    JAV71198.1    DQ156995    ABA40401.1    GDHC01010933    JAQ07696.1    GBHO01037637    JAG05967.1    AJWK01003276    AJWK01003277    AJWK01003278    AJWK01003279    AB817329    BAO01096.1    KK852446    KDR23756.1    MH810187    QBC65452.1    CH477314    EAT43844.2    KQ414786    KOC60881.1    KQ765605    OAD53845.1    ATLV01020692    KE525305    KFB45576.1    ABLF02026175    AAAB01008964    EAA12259.2    KQ434889    KZC10245.1    KQ435878    KOX70070.1    GFXV01007012    MBW18817.1    APCN01000787    UFQS01000241    UFQT01000241    SSX01881.1    SSX22258.1    KK107722    EZA47997.1    QOIP01000012    RLU16033.1    ADTU01026693    ADTU01026694    GL437267    EFN70717.1    GL449658    EFN82280.1    KQ980884    KYN11908.1    GL888102    EGI67461.1    KQ976532    KYM81542.1    KQ981296    KYN43101.1    GBYB01011050    JAG80817.1    KQ982905    KYQ49490.1    CVRI01000054    CRL00731.1    ADMH02000138    ETN67632.1    AXCN02000807    GDIQ01169442    JAK82283.1    GDIQ01218475    JAK33250.1    GDIQ01123758    JAL27968.1    GDIP01112169    JAL91545.1    GDIP01176963    JAJ46439.1    GDIP01200416    JAJ22986.1    GDIQ01000326    JAN94411.1    GDIQ01121210    JAL30516.1    GDIQ01203680    JAK48045.1    GDIQ01205331    JAK46394.1    GDIQ01248023    GDIQ01222322    GDIQ01202179    GDIQ01202178    GDIQ01200887    GDIQ01198283    GDIQ01198282    GDIQ01195137    GDIQ01184887    GDIQ01177190    GDIQ01170344    GDIQ01146956    GDIQ01121209    GDIQ01099917    GDIQ01099916    GDIQ01098466    GDIQ01096966    GDIQ01059235    GDIQ01050744    JAK56588.1    GDIQ01206779    GDIQ01206778    JAK44947.1    GDIQ01206780    GDIQ01045993    JAN48744.1    GDIQ01248024    GDIQ01248022    GDIQ01131159    GDIQ01099915    GDIQ01050745    JAL51811.1    GDIQ01203681    GDIQ01203679    JAK48044.1    GDIQ01205332    GDIQ01205330    JAK46395.1    GDIQ01152748    JAK98977.1    AXCM01002828    GDIQ01152749    JAK98976.1    GL732531    EFX85901.1    GDIP01094474    JAM09241.1    GDIP01112168    JAL91546.1    GDIQ01101416    GDIQ01101415    JAL50311.1    GDIQ01161195    JAK90530.1    GDIP01021454    JAM82261.1    GDIP01176962    JAJ46440.1    LRGB01000446    KZS19071.1    GDIQ01069129    JAN25608.1    CH902620    EDV31969.2    CH963857    EDW75753.1    OUUW01000006    SPP82502.1    SPP82503.1    CH379061    EAL33279.2    KRT04872.1    KRT04873.1    KRT04875.1    CH479195    EDW27375.1    GDIP01203061    JAJ20341.1    GDIP01122915    JAL80799.1    GDIQ01188085    JAK63640.1    CM002910    KMY90206.1    KMY90207.1    CM000361    EDX05007.1    CH480818    EDW51716.1    KRT04874.1    GDIQ01134008    JAL17718.1    CH940654    EDW57572.2    LJIJ01002623    ODM89463.1    KRF77820.1    KRF77822.1   

Proteomes

UP000283053    UP000007151    UP000007266    UP000009046    UP000092461    UP000027135    + More
UP000008820    UP000053825    UP000030765    UP000002358    UP000007819    UP000007062    UP000076502    UP000053105    UP000075884    UP000076407    UP000075840    UP000075900    UP000005203    UP000053097    UP000279307    UP000005205    UP000000311    UP000075885    UP000008237    UP000078492    UP000007755    UP000078540    UP000078541    UP000069272    UP000075809    UP000183832    UP000000673    UP000075886    UP000075883    UP000076408    UP000000305    UP000076858    UP000007801    UP000007798    UP000268350    UP000001819    UP000008744    UP000095301    UP000000304    UP000001292    UP000008792    UP000094527   

Pfam

PF13855   LRR_8        + More
PF00001   7tm_1
PF13306   LRR_5
PF00560   LRR_1
PF12799   LRR_4
PF01426   BAH

Interpro

IPR000276   GPCR_Rhodpsn        + More
IPR017452   GPCR_Rhodpsn_7TM       
IPR032675   LRR_dom_sf       
IPR002131   Gphrmn_rcpt_fam       
IPR001611   Leu-rich_rpt       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR026906   LRR_5       
IPR025875   Leu-rich_rpt_4       
IPR001025   BAH_dom       

Gene 3D

3.80.10.10    

ProteinModelPortal

A0A1Z2RRJ6   A0A3S2LWM3   A0A0S1YDB3   A0A212FFU8   A0A1B6D8H7   A0A1B6C4N7   + More
N1NTY6   D2A057   E0VBH3   A0A1Y1LE83   A0A1Y1LE78   B5FX31   A0A146LLJ9   A0A0A9WC00   A0A1B0CA50   U3U4H2   A0A067RIS3   A0A1S4F8L0   Q17BX6   A0A0L7QQW4   A0A310SHS4   A0A084W5T2   K7J2S0   J9JJ85   Q7PNF8   A0A1S4GYP9   A0A154PEE5   A0A0M8ZS75   A0A2H8TX37   A0A182NTW5   A0A182XLC1   A0A182ICA0   A0A182RM87   A0A088A353   A0A336KBL3   A0A026VW63   A0A3L8D7G4   A0A158NUS9   E2A761   A0A182P8N2   E2BPS9   A0A151IVP6   F4WE23   A0A195BBD8   A0A151K0H7   A0A182F1X3   A0A0C9RR80   A0A151WNU2   A0A1J1IKH6   W5JTD1   A0A182QEA2   A0A0P5N468   A0A0N8B2S3   A0A0P5PSV4   A0A0P5UJ40   A0A0P5C2I2   A0A0P5BFH2   A0A0P6IRX4   A0A0P5Q151   A0A0P5J8A3   A0A0N8B7G6   A0A0P5JTW1   A0A0P5IZA1   A0A0P6FSX1   A0A0N8CA43   A0A0P5JKI1   A0A0P5IZH6   A0A0P5PB86   A0A182MV53   A0A0P5NH94   A0A182Y3A4   E9G3Z3   A0A0P5VY59   A0A0P5UJD4   A0A0P5RUF7   A0A0N8BN83   A0A0P6B1J3   A0A0P5C2S6   A0A162PR01   A0A0P6E2F1   B3MMS8   B4MVN3   A0A3B0JQ41   A0A3B0JNN5   Q29K98   B4GX48   A0A0P5A7E3   A0A0P5TX13   A0A1I8MKD6   A0A0P5LXM4   A0A0J9R276   B4Q5G3   B4HXD6   A0A0R3NV45   A0A0P5P452   B4M8P6   A0A1D2M907   A0A0Q9WAP5  

PDB

4KNG     E-value=2.52345e-32,     Score=351

KEGG

101745218    K08399 leucine-rich repeat-containing G protein-coupled receptor 6 | (RefSeq) lutropin-choriogonadot

PATHWAY

04310    Wnt signaling pathway - Bombyx mori (domestic silkworm)

GO

GO:0004930   GO:0016500   GO:0016021   GO:0005887   GO:0007190   GO:0007189   GO:0008528   GO:0009755   GO:0004721   GO:0007218   GO:0003682   GO:0008188   GO:0007298   GO:0007564   GO:0001837   GO:0036335   GO:0030709   GO:0005515   GO:0007186   GO:0006915   GO:0016651   GO:0046835   GO:0006281   GO:0006259  

Length:

967

Number of predicted TMHs:

7

Exp number of AAs in TMHs:

150.78231

Exp number, first 60 AAs:

0.00314

Total prob of N-in:

0.00032

outside

1  -  471

TMhelix

472  -  494

inside

495  -  502

TMhelix

503  -  525

outside

526  -  546

TMhelix

547  -  569

inside

570  -  589

TMhelix

590  -  612

outside

613  -  631

TMhelix

632  -  654

inside

655  -  677

TMhelix

678  -  700

outside

701  -  709

TMhelix

710  -  732

inside

733  -  967

 

 

Pi

22.815254

Theta

17.550463

Tajima's D

-1.643889

CLR

0.109176

CSRT

0.0412979351032448

Interpretation

Uncertain